GBrowse Details

Vigan.02G197200.01

Basic Information:
Name: Vigan.02G197200.01
Multiple alignment
Variant Information
Position: Chr02:25318607..25322029 (- strand)
Length: 3423
Functional Information:
Description: Similar to Protein kinase. [Q39893, Glycine max]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine/threonine- / dual specificity protein kinase, catalytic domain (IPR002290)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Protein kinase, ATP binding site (IPR017441)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:26.32,14.13,10.79,23.78,16.42,7.21,24.27,15.12
Arabidopsis thaliana homolog: AT1G10940.2, AT1G60940.1, AT2G23030.1, AT5G08590.1, AT5G63650.1
Automatic updates:
Name: NM_001251369 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max protein kinase (SPK-4), mRNA.
PubMed ID: 9267431 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr02:25318607..25318874 (- strand)
Length: 268
Type: three_prime_UTR
Position: Chr02:25318875..25319186 (- strand)
Length: 312
Type: CDS
Position: Chr02:25320066..25320164 (- strand)
Length: 99
Type: CDS
Position: Chr02:25320257..25320361 (- strand)
Length: 105
Type: CDS
Position: Chr02:25320536..25320628 (- strand)
Length: 93
Type: CDS
Position: Chr02:25320708..25320800 (- strand)
Length: 93
Type: CDS
Position: Chr02:25320895..25320948 (- strand)
Length: 54
Type: CDS
Position: Chr02:25321038..25321139 (- strand)
Length: 102
Type: CDS
Position: Chr02:25321264..25321338 (- strand)
Length: 75
Type: CDS
Position: Chr02:25321587..25321706 (- strand)
Length: 120
Type: CDS
Position: Chr02:25321707..25322029 (- strand)
Length: 323
Type: five_prime_UTR


>Vigan.02G197200.01
TAAAGTGAAC ATCTAATTCC AACCAAAGCA CAAAAACACA CTCACTGCAC ATTCTAAACC TCTGAGTGAA TCATTCGACG
ATTATTAATG GATAAAGTGA CAGAAGCAAC TGACAAACAT AACCGATAAC CAAGTGCCAC CCTGCACCAC TTACAATACC
TTTTACCCCC AACTCTTGCT TTGCTTCAAA ACCCATTATT ATTCGTTTCC CTACCCTTTC TTCTCTTCTT CATCGTTCGC
ATCAAGCCTC CACTTTTTGC ATAACCTTTT GATCAAAGTG GGAACAACAT AGAATGCTTG TGTGATTCTC TATTTTCTAG
TTCATGGATA AGTACGAGGC TGTTAAGGAA TTGGGGGCAG GCAATTTTGG GGTGGCCAGG CTTATGAGGA ACAGGGTCAC
CAAGGAGCTC GTAGCCATGA AATACATCGA GCGTGGCCCA AAGATTGATG AGAACGTGGC AAGGGAGATT ATGAACCACA
GGTCCCTTCG GCATCCCAAT ATAATTCGTT ACAAGGAGGT GGTTTTGACT CCCACACATT TGGCAATTGT GATGGAGTAT
GCAGCAGGAG GAGAGCTCTT TGAGAGGATA TGCAGTGCTG GCAGGTTCAG TGAAGACGAG GCTAGATATT TCTTTCAGCA
GCTGATCTCT GGTGTCCATT TCTGTCATAC AATGCAAATA TGCCACCGAG ATTTGAAGCT AGAAAATACC CTTTTAGATG
GAAGTCATGC TCCTCGGTTA AAAATTTGTG ACTTCGGTTA CTCCAAGTCA TCTTTGCTGC ATTCCCGACC CAAATCAACA
GTTGGAACAC CTGCTTATAT AGCACCGGAA GTTCTTTCAA GGCGAGAGTA CGATGGAAAG TTGGCTGATG TATGGTCGTG
TGGAGTGACT CTTTATGTCA TGCTGGTTGG AGCATACCCC TTTGAGGATC AGGATGACCC TAGGAATTTT AGGAAAACAA
TTCAGCGTAT AATGGCTGTT CAATACAAAA TCCCTGACTA TGTTCACATA TCTCAAGATT GTAGACAACT TCTCTCTCGT
ATATTTGTTG CAAATCCATT GAGGAGAATT ACTATTAAGG AAATTAAGAA TCACCCATGG TTTTTGAAGA ATCTTCCAAG
GGAGCTAACT GAATCAGCTC AAGCTATTTA TTACCAGAGG GACAGTCCAA ACTTTCACCT TCAAAGTGTG GACGAGATAA
TGAAAATTGT GGGAGAGGCA AGAAATCCAC CTCCAGTATC TAGGCTGGTC AAAGGTTTTG GTTGGGAAGG TGAAGAAGAT
TTGGATGAAG AAGTGGAGGA AGAGGAGGAT GAAGAAGATG AGTATGATAA GAGGGTCAAA GAGGTTCATG CAAGTGGGGA
ATTCCAAATT AGTTAAAAAC TCTCAAAATT CTTGTGCACT GTTTTAGAAG TCACCTTTTT TATTTTGTGT ACCTTAAGTC
AGCTATTTAT CTGTATTATA TTTCTGGTTC TGTTCGTGTA ATATAGTTCG TGTAATATAG TTCGTGTATT ACAATGATCG
CTATTCATGA GAATAATAGT TGTTTGATTA CATTTGAAAT TGACTTGACA CTGCAATACT TGTCTGTTTT TATCTGCAAG
AAAATTTACT CAATAATGCT TTCAGTGGAT TCAATGAACA AGGC

>Vigan.02G197200.01
ATGGATAAGT ACGAGGCTGT TAAGGAATTG GGGGCAGGCA ATTTTGGGGT GGCCAGGCTT ATGAGGAACA GGGTCACCAA
GGAGCTCGTA GCCATGAAAT ACATCGAGCG TGGCCCAAAG ATTGATGAGA ACGTGGCAAG GGAGATTATG AACCACAGGT
CCCTTCGGCA TCCCAATATA ATTCGTTACA AGGAGGTGGT TTTGACTCCC ACACATTTGG CAATTGTGAT GGAGTATGCA
GCAGGAGGAG AGCTCTTTGA GAGGATATGC AGTGCTGGCA GGTTCAGTGA AGACGAGGCT AGATATTTCT TTCAGCAGCT
GATCTCTGGT GTCCATTTCT GTCATACAAT GCAAATATGC CACCGAGATT TGAAGCTAGA AAATACCCTT TTAGATGGAA
GTCATGCTCC TCGGTTAAAA ATTTGTGACT TCGGTTACTC CAAGTCATCT TTGCTGCATT CCCGACCCAA ATCAACAGTT
GGAACACCTG CTTATATAGC ACCGGAAGTT CTTTCAAGGC GAGAGTACGA TGGAAAGTTG GCTGATGTAT GGTCGTGTGG
AGTGACTCTT TATGTCATGC TGGTTGGAGC ATACCCCTTT GAGGATCAGG ATGACCCTAG GAATTTTAGG AAAACAATTC
AGCGTATAAT GGCTGTTCAA TACAAAATCC CTGACTATGT TCACATATCT CAAGATTGTA GACAACTTCT CTCTCGTATA
TTTGTTGCAA ATCCATTGAG GAGAATTACT ATTAAGGAAA TTAAGAATCA CCCATGGTTT TTGAAGAATC TTCCAAGGGA
GCTAACTGAA TCAGCTCAAG CTATTTATTA CCAGAGGGAC AGTCCAAACT TTCACCTTCA AAGTGTGGAC GAGATAATGA
AAATTGTGGG AGAGGCAAGA AATCCACCTC CAGTATCTAG GCTGGTCAAA GGTTTTGGTT GGGAAGGTGA AGAAGATTTG
GATGAAGAAG TGGAGGAAGA GGAGGATGAA GAAGATGAGT ATGATAAGAG GGTCAAAGAG GTTCATGCAA GTGGGGAATT
CCAAATTAGT TAA

>Vigan.02G197200.01
MDKYEAVKEL GAGNFGVARL MRNRVTKELV AMKYIERGPK IDENVAREIM NHRSLRHPNI IRYKEVVLTP THLAIVMEYA
AGGELFERIC SAGRFSEDEA RYFFQQLISG VHFCHTMQIC HRDLKLENTL LDGSHAPRLK ICDFGYSKSS LLHSRPKSTV
GTPAYIAPEV LSRREYDGKL ADVWSCGVTL YVMLVGAYPF EDQDDPRNFR KTIQRIMAVQ YKIPDYVHIS QDCRQLLSRI
FVANPLRRIT IKEIKNHPWF LKNLPRELTE SAQAIYYQRD SPNFHLQSVD EIMKIVGEAR NPPPVSRLVK GFGWEGEEDL
DEEVEEEEDE EDEYDKRVKE VHASGEFQIS *