GBrowse Details

Vigan.02G236000.01

Basic Information:
Name: Vigan.02G236000.01
Multiple alignment
Variant Information
Position: Chr02:32706254..32708217 (+ strand)
Length: 1964
Functional Information:
Description: Similar to anaphase-promoting complex subunit 15-like isoform X3. [XP_004501878.1, Cicer arietinum]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:11.25,13.25,26.26,35.59,43.70,43.37,21.04,21.46
Arabidopsis thaliana homolog: AT5G63135.1
Automatic updates:
Name: NM_001251143 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527060 (LOC100527060), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:32706254..32706298 (+ strand)
Length: 45
Type: five_prime_UTR
Position: Chr02:32706299..32706442 (+ strand)
Length: 144
Type: CDS
Position: Chr02:32707906..32708061 (+ strand)
Length: 156
Type: CDS
Position: Chr02:32708062..32708217 (+ strand)
Length: 156
Type: three_prime_UTR


>Vigan.02G236000.01
AATGGAATGA AATAGAGACG TTGAAGCGCG AGTGAGGAAG AAAAGATGTT ACAGTTTCCG GCTTACATGA CTCAGTACCC
ACTCTCGACC AGGACTATTC CGACGTCGTT TCTTCTACCC TCTCAGTGGC CCCATCCCCA AAACGAAGAA CTCCTCCTCG
CCATGGAAGA GTCCGATTTC GAAGAAAAGT GCAATGAGAT TAGGAAGATG AACAGCAACC TTATTGTGAT AGGGAAAACC
ACAAATGAAA ATGATAAAGA AGATTTTGAC AATGAGGCAG ATGACGATGA TGCTGACAAT GTAGAGGAAT CTGAGGGTGA
AGAATTTGAG CAAGAAACTG GTTGAGAAAG TTCCACATCA GTCAGTGGCC AGTTATATTC TGTTTGTATT ATTTGGGACT
GCTAGTCCAA ATCTTTGTAT CGAGTTTTTC TTCTATTCGG TTTTTCGACT TAGTATTAAC CATTGGCTTT TCATTCATAT
AGAACTTTGT ATTATATATT A

>Vigan.02G236000.01
ATGTTACAGT TTCCGGCTTA CATGACTCAG TACCCACTCT CGACCAGGAC TATTCCGACG TCGTTTCTTC TACCCTCTCA
GTGGCCCCAT CCCCAAAACG AAGAACTCCT CCTCGCCATG GAAGAGTCCG ATTTCGAAGA AAAGTGCAAT GAGATTAGGA
AGATGAACAG CAACCTTATT GTGATAGGGA AAACCACAAA TGAAAATGAT AAAGAAGATT TTGACAATGA GGCAGATGAC
GATGATGCTG ACAATGTAGA GGAATCTGAG GGTGAAGAAT TTGAGCAAGA AACTGGTTGA 

>Vigan.02G236000.01
MLQFPAYMTQ YPLSTRTIPT SFLLPSQWPH PQNEELLLAM EESDFEEKCN EIRKMNSNLI VIGKTTNEND KEDFDNEADD
DDADNVEESE GEEFEQETG*