GBrowse Details

Vigan.02G240300.01

Basic Information:
Name: Vigan.02G240300.01
Multiple alignment
Variant Information
Position: Chr02:33480635..33484887 (+ strand)
Length: 4253
Functional Information:
Description: Similar to Uncharacterized protein. [I1KCF1, Glycine max]
GO: Biological Process: transport (GO:0006810)
Cellular Component: membrane (GO:0016020)
Cellular Component: integral to membrane (GO:0016021)
Molecular Function: transporter activity (GO:0005215)
InterPro: Drug/metabolite transporter (IPR000620)
Triose phosphate/phosphoenolpyruvate translocator (IPR004696)
Triose-phosphate transporter domain (IPR004853)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:3.65,7.80,27.89,18.09,56.57,42.14,22.29,28.01
Arabidopsis thaliana homolog: AT5G33320.1
Automatic updates:
Name: NM_001254388 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max plastid phosphoenolpyruvate/phosphate translocator-like (LOC732612), mRNA.
PubMed ID: 16101913 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr02:33480635..33480910 (+ strand)
Length: 276
Type: five_prime_UTR
Position: Chr02:33480911..33481258 (+ strand)
Length: 348
Type: CDS
Position: Chr02:33481675..33481797 (+ strand)
Length: 123
Type: CDS
Position: Chr02:33481879..33482031 (+ strand)
Length: 153
Type: CDS
Position: Chr02:33482476..33482561 (+ strand)
Length: 86
Type: CDS
Position: Chr02:33482682..33482766 (+ strand)
Length: 85
Type: CDS
Position: Chr02:33482868..33482987 (+ strand)
Length: 120
Type: CDS
Position: Chr02:33483094..33483162 (+ strand)
Length: 69
Type: CDS
Position: Chr02:33483820..33483949 (+ strand)
Length: 130
Type: CDS
Position: Chr02:33484061..33484137 (+ strand)
Length: 77
Type: CDS
Position: Chr02:33484138..33484887 (+ strand)
Length: 750
Type: three_prime_UTR


>Vigan.02G240300.01
CTCTTTTAAA AACACCACCT ACTTCCATTC ATTCATCACT CGCTCTCACA TACACATACC AAACAAAACC TTGGTGGCGG
ATACTCCTAG GAAATCTCCC TCTCTTACTC CCTTAAAAGC TAAACTTAAC ATAACAATTC AACCCAACCC TTCCGACAAC
ACATCACAGC CACCAACCGC AACACAAGAG AAGCCTACGC TCTTGTGTTC CGTTTCTTTC TTCACATTCA TTCCTGCCTT
CTCTTTCTTT CTCTGTGTCT CTCTCAGATC TCGAAAATGC AGAGCGCGGC TTTCACTCTC TCTCCGTCGC TCTCTCTTCC
TCTCCGCAAC TATTCTCTAA ACGCTTCTAG ACCTTCCCTC CCTCTCAGAC TTTTCGCCAA ACACGCAGAA GGCGTCAACT
CCAATGGCGC CTCTTCCACT TCCTTCATCC GCCGATCTTG GACTGTCTCT CCTTCCTCTT CCTTCAAGTT CCGCCCGCTC
CCTCCCTCTC CTCCGCGCGC CGCGGAGAAC GCCGTTCCCG ACAGCGCGCC TGCCGAAAAT TCGCTCTTCA AAACACTCGA
GCTCGGCTCC TTGTTTGGCC TCTGGTACCT CTTCAACATC TACTTCAATA TCTACAACAA ACAGGTGTTG AAGGCGTTTC
ATTATCCGGT AACTGTGACT GTTGTTCAAT TTGCGGTTGG GACTGTGCTC GTGGCGATTA TGTGGGGTTT GAATCTCTAC
AAGAGGCCGA AGATCAGTGG TGCTATGCTT GGAGCGATTT TGCCACTGGC TGCGGTGCAT ACGTTGGGGA ATCTTTTCAC
TAATATGAGT CTTGGGAAGG TGGCCGTGTC TTTCACTCAC ACTATCAAGG CCATGGAGCC TTTCTTTTCA GTGGTCCTTT
CTGCCATGTT CCTTGGAGAG TTTCCTACAC CTTGGGTGGT TGGTTCCCTT GTGCCTATTG TTGGTGGAGT TGCACTGGCG
TCTGTTACTG AGGCCTCTTT CAATTGGGCC GGATTTTGGA GTGCAATGGC CTCAAATGTG ACAAATCAAT CCCGTAATGT
TCTTAGCAAA AAGGCTATGG TTAAGAATGA GGATTCTATG GACAATATCA CTCTATTTTC TATAATAACA GTAATGTCCT
TCTTCTTATT AGCACCAGTG GCTGTCTTCA TGGAGGGTGT CAAATTTACC CCTGCTTACT TGCAATCTGC TGGGGTAAAT
GTTAAACAAC TTTACGTCAG ATCTCTTCTT GCCGCACTCT GTTTCCATGC GTATCAACAA GTGTCTTATA TGATATTACA
AAGGGTATCA CCTGTTACCC ACTCTGTGGG CAATTGTGTG AAGCGGGTTG TGGTCATTGT TAGCTCTGTC ATTTTCTTCC
AAACACCTGT CTCACCTGTG AATGCTTTTG GTACTGCTAT AGCTCTTGCT GGCGTGTTCC TCTATTCAAG GGTGAAGCGA
ATTAAGTCAA AGCCAAAAAC AGCTTAATTT TCATTGGTGA AATTTTGTTA GTTGCATCTC GAAAAGCCAA AATAGCTGCA
ACATTCTAAT TTCTTTGTAG GGGCGATATA GAGAATATGA GGATTACCTT TATCTACCTT CCTTTGTCCT TTTTTTATCT
TGTGGATTTC ATTATTTGTG TCTGAGTAAG TACCTATTGG TTTTGCTCCA CGAAAAAAAA AAATATTTTG GTCATACCCA
CTGCAAGATG TGTTTTGAAT GAATCATTTT AGTATGTAAT CAGCCATAAA TTTTTTAAAT GTCTACAAGT TTTGTCAGTA
ATGTTGAGTA CTGAGTATTC TTTCACTGAT CCCTGGGCAT TAAATTGTGA ATGTAGTTGC ATCTTAGATC TGGTTGTCTT
AAACTGTTTA GTCGAGATTT GAGATGCAAC CACAACAGTA TTGTTGTGTA CAAATTCTGC AGTGTGGCTT CCGCAAGTCA
TATTTCCAAT AATACGACAA CAATGGTACA AGGAAGACCC AAAAATGAGT CAGACAAAGT GTACAAGAGG CCAAAATCCT
AAGTTTTTTA TATGTCCCGG TAGGGTAATG CGATTCTTAA GTTGTTCGAA TAATAAATAG AAGACAATAT ACTTCATAAG
GGGATTGAAA TGGTATTTAC AAAATTGAAA TTTTCGAACC TAGCCTTTTC TTTGAATCAC TCAAATATCA GTTTTTGAAA
CAAATGTGAA TGGTATTGAG AAATGGTATT GAGCAACGAG GAATGATTAG AGAAAGA

>Vigan.02G240300.01
ATGCAGAGCG CGGCTTTCAC TCTCTCTCCG TCGCTCTCTC TTCCTCTCCG CAACTATTCT CTAAACGCTT CTAGACCTTC
CCTCCCTCTC AGACTTTTCG CCAAACACGC AGAAGGCGTC AACTCCAATG GCGCCTCTTC CACTTCCTTC ATCCGCCGAT
CTTGGACTGT CTCTCCTTCC TCTTCCTTCA AGTTCCGCCC GCTCCCTCCC TCTCCTCCGC GCGCCGCGGA GAACGCCGTT
CCCGACAGCG CGCCTGCCGA AAATTCGCTC TTCAAAACAC TCGAGCTCGG CTCCTTGTTT GGCCTCTGGT ACCTCTTCAA
CATCTACTTC AATATCTACA ACAAACAGGT GTTGAAGGCG TTTCATTATC CGGTAACTGT GACTGTTGTT CAATTTGCGG
TTGGGACTGT GCTCGTGGCG ATTATGTGGG GTTTGAATCT CTACAAGAGG CCGAAGATCA GTGGTGCTAT GCTTGGAGCG
ATTTTGCCAC TGGCTGCGGT GCATACGTTG GGGAATCTTT TCACTAATAT GAGTCTTGGG AAGGTGGCCG TGTCTTTCAC
TCACACTATC AAGGCCATGG AGCCTTTCTT TTCAGTGGTC CTTTCTGCCA TGTTCCTTGG AGAGTTTCCT ACACCTTGGG
TGGTTGGTTC CCTTGTGCCT ATTGTTGGTG GAGTTGCACT GGCGTCTGTT ACTGAGGCCT CTTTCAATTG GGCCGGATTT
TGGAGTGCAA TGGCCTCAAA TGTGACAAAT CAATCCCGTA ATGTTCTTAG CAAAAAGGCT ATGGTTAAGA ATGAGGATTC
TATGGACAAT ATCACTCTAT TTTCTATAAT AACAGTAATG TCCTTCTTCT TATTAGCACC AGTGGCTGTC TTCATGGAGG
GTGTCAAATT TACCCCTGCT TACTTGCAAT CTGCTGGGGT AAATGTTAAA CAACTTTACG TCAGATCTCT TCTTGCCGCA
CTCTGTTTCC ATGCGTATCA ACAAGTGTCT TATATGATAT TACAAAGGGT ATCACCTGTT ACCCACTCTG TGGGCAATTG
TGTGAAGCGG GTTGTGGTCA TTGTTAGCTC TGTCATTTTC TTCCAAACAC CTGTCTCACC TGTGAATGCT TTTGGTACTG
CTATAGCTCT TGCTGGCGTG TTCCTCTATT CAAGGGTGAA GCGAATTAAG TCAAAGCCAA AAACAGCTTA A

>Vigan.02G240300.01
MQSAAFTLSP SLSLPLRNYS LNASRPSLPL RLFAKHAEGV NSNGASSTSF IRRSWTVSPS SSFKFRPLPP SPPRAAENAV
PDSAPAENSL FKTLELGSLF GLWYLFNIYF NIYNKQVLKA FHYPVTVTVV QFAVGTVLVA IMWGLNLYKR PKISGAMLGA
ILPLAAVHTL GNLFTNMSLG KVAVSFTHTI KAMEPFFSVV LSAMFLGEFP TPWVVGSLVP IVGGVALASV TEASFNWAGF
WSAMASNVTN QSRNVLSKKA MVKNEDSMDN ITLFSIITVM SFFLLAPVAV FMEGVKFTPA YLQSAGVNVK QLYVRSLLAA
LCFHAYQQVS YMILQRVSPV THSVGNCVKR VVVIVSSVIF FQTPVSPVNA FGTAIALAGV FLYSRVKRIK SKPKTA*