GBrowse Details

Vigan.02G253400.01

Basic Information:
Name: Vigan.02G253400.01
Multiple alignment
Variant Information
Position: Chr02:35484749..35496099 (+ strand)
Length: 11351
Functional Information:
Description: Similar to Uncharacterized protein. [I1JWS3, Glycine max]
GO: Biological Process: cation transport (GO:0006812)
Biological Process: phospholipid transport (GO:0015914)
Cellular Component: integral to membrane (GO:0016021)
Molecular Function: nucleotide binding (GO:0000166)
Molecular Function: magnesium ion binding (GO:0000287)
Molecular Function: phospholipid-translocating ATPase activity (GO:0004012)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: cation-transporting ATPase activity (GO:0019829)
Molecular Function: metal ion binding (GO:0046872)
InterPro: Cation-transporting P-type ATPase (IPR001757)
Cation-transporting P-type ATPase, subfamily IV (IPR006539)
P-type ATPase, A domain (IPR008250)
P-type ATPase, phosphorylation site (IPR018303)
HAD-like domain (IPR023214)
P-type ATPase, cytoplasmic domain N (IPR023299)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:8.52,9.71,5.45,7.17,5.43,2.71,2.90,9.47
Arabidopsis thaliana homolog: AT1G13210.1, AT1G17500.1, AT1G26130.2, AT1G54280.1, AT1G59820.1, AT1G68710.1, AT1G72700.1, AT3G13900.1, AT3G25610.1, AT3G27870.1, AT5G04930.1
Automatic updates:
Name: PV092042 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max isolate GmALA4 phospholipid-translocating ATPase (ALAs) mRNA, partial cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:35484749..35485327 (+ strand)
Length: 579
Type: five_prime_UTR
Position: Chr02:35485328..35485729 (+ strand)
Length: 402
Type: CDS
Position: Chr02:35486822..35488185 (+ strand)
Length: 1364
Type: CDS
Position: Chr02:35491911..35492021 (+ strand)
Length: 111
Type: CDS
Position: Chr02:35492111..35492387 (+ strand)
Length: 277
Type: CDS
Position: Chr02:35492474..35492562 (+ strand)
Length: 89
Type: CDS
Position: Chr02:35492632..35492740 (+ strand)
Length: 109
Type: CDS
Position: Chr02:35493767..35493979 (+ strand)
Length: 213
Type: CDS
Position: Chr02:35494096..35494221 (+ strand)
Length: 126
Type: CDS
Position: Chr02:35494323..35494421 (+ strand)
Length: 99
Type: CDS
Position: Chr02:35494529..35494720 (+ strand)
Length: 192
Type: CDS
Position: Chr02:35495277..35495801 (+ strand)
Length: 525
Type: CDS
Position: Chr02:35495802..35496099 (+ strand)
Length: 298
Type: three_prime_UTR


>Vigan.02G253400.01
TCTCTCTCTC TCTGGTGTTT GCTTCTATGC CGACACAAGA ACGATATTAC CTCAATTTTC TCTTGGCACG GTGCTGTTCG
ATAACGTTAG AAAGTAGCAG CATTTGATAT GAAATGCACC TTCCTAACAT GCCAAATTCC AAGCCTCCTT CTTTTCGTGA
CCCAGTTACG TAAACCATCC CACACTTGTC GAAGTACACT GCACATTGCT TGTCCCCAAC AGAACATAGG TTTTATCCTT
TAAACTTCCT CTTTTGTTTC TCTTCCATTC TTCACTTTCC GTTCCTTCGT GGCCAAGATT GCGTAATTTT GTGGCAAAAG
GCCAAAAGGG GTTCCGAGTT TTTGTGTGGT TGTGATGTTT TTGTTTGTTG ACTAGTGACA CTCAGTTCCT TTTCAAGCAT
AGTGGTTAGG GAAGTTGCTT TTTAAGACTA GGTAAGGTTA CCGATTTGTC TGCTAGTGTT GGACTTTGCT TCAGGGATTG
GGAAGAGTAA TTAGTCCACC TTATTGACCC TTGTTGCCTT TATTATTGCT ATCATTTTGG AATTTGGATC AATCACTTAT
ACCATTTAGA TAGAAGAAGA TGAGGGGTGG GAGAAAGAGG AGTATGATAA AGCTTAAGTT TAGCAAGATC TACTCATTTG
CTTGTGGTAG AACAACCTTG AGGAGAGAAC ATTCGCGGAT TGGGGGACAT GGTCATTCCA GGGTTGTTTT CTGCAATGAA
CCTGATAGGT TTGAGGTAGG GGTTTTGAAT TATGCTGATA ATTCTGTTAG GTCCACAAAA TACACGGTTG CTACTTTCTT
GCCAAAGTCA CTTTTTGAGC AGTTTAGGAG GGTGGCTAAT TTCTATTTCT TGGTGGCTGG GATCTTGGCC TTCACAAAGC
TTACTCCTTA TACTGCTGTC AGTGCTATCC TTCCACTCTC TATCATCATT GGGGCAACTA TGGTGAAAGA GGGTATTGAA
GACTGGCGCA GGAAAAAGCA GGATATTGAG GTGAACAAGA GAAGAGTTAT ATTGCATAAA GGTGATGGCA TTTTTGAATA
TACTGAATGG AAGAATCTGA GAGTAGGGAA TATAGTGAAG ATAATGAAGG ATGAATTCTT CCCTGCTGAC CTCCTACTGC
TTTCCTCCAG TTATGAGGAT GCAGTATGCT ATGTTGAGAC CATGAACTTG GATGGTGAAA CAAATTTGAA ATTAAAACAA
GGGTTGGATG TAACTTCTTC CTTACAGGAG GACTTCAAAA TATGTGATTT TAGAGCTGTC ATCAAATGTG AGGACCCAAA
TGCAAATCTG TATTCTTTTG TTGGGAGCAT GGAGTTTGAA GAGCAAAAGT ACCCTCTTTC TGCTCAGCAA CTTCTTCTAA
GAGACTCCAA ACTTCGCAAT ACAGACTATG TGTTTGGAGC CGTCATCTTT ACCGGTCATG ACACAAAGGT TATTCAAAAC
TCCACTGATC CTCCTTCAAA AAGAAGCAAA ATTGAGAAGA AGATGGATAA GATTATCTAC TTCTTGTTTT GTGTTTTATT
TCTAATTGCA TTTGTTGGAT CTATTATCTT TGGCATCATA ACCAAAGGAG ACCTGAAAAA TGGGTTGATG AAAAGATGGT
ATCTAAGACC AGATAGTTCC ACAATTTTCT TTGATCCAGA GAGAGCAGCT GCAGCTGCTA TATTTCATTC TTTAACAGCC
TTAATGTTAT ATAACTTCTT TATTCCTATC TCTCTGTATT TCTCAATAGA AATTGTCAAA GTCCTTCAGA GCATCTTCAT
CAATCAAGAT ATCCACATGT ACTATGAAGA AGCAGACAAA CCAGCTCGTG CCCGTACTTC AAACTTGAAT GAGGAACTAG
GCCAAGTTGA CACAATACTT TCTGATAAAA CTGGGACTCT GACCTGCAAC TCAATGGAGT TCATCAAATG TTCTGTTGCT
GGGGTAGCTT ATGGTCATGG TGTAACAGAG GTTGAGCAAG TCACCGGAAG AAGTAACGGT TCACCTATTC TTCATGAGCA
TATTAATGGT CTAAAATCAA AATCTAATGA AATCGGGGAC TCTCGAGATA GAAAAGAGCC TATTAAAGGT TTTAACTTTA
CAGATGAAAG GATAATGAAT GGGAACTGGG TTAATGAACC TTTTGCTGAT GTTATACAAA AGTTTTTTCG CTTATTGGCA
ATTTGTCATA CTGCCATACC AGAAGTGGAT GAAGAAACAG GAAATGTCTC ATATGAGGCT GAATCTCCAG ATGAAGCAGC
ATTTGTGATT GCTGCAAGTG AAGTTGGTTT TAAATTCTAC AAAAGGACCC AGAATTGCTT GTCAACGTAT GAGTTGGATC
CTGTTTCTGG TAATGAAGTT GAAAGGACAT ACAAGCTTCT CAATGTTTTA GAGTTTAGTA GTTCAAGGAA GCGAATGTCA
GTGATAGTGA AAGATGAAGA AGGGAGAATT TTACTACTCT CTAAAGGTGC TGACAGTGTC ATGTTTGAAA GGCTTGCCAA
CAGTGGGAGG ACGTTTGAAG AGAAAACAAT GGAACATGTG CATCAATATG CTGATGCAGG TCTAAGGACT CTAATTCTTT
CTTATCGTGA ACTTGATGAA GAAGAATTCA AGGAGTTTGA TGGTAAATTG TCTGAAGTAA AAAATTCAGT CTCAGAAGAC
CGGGAAACAC TGATTGAAGA ATTATTGGAT ACGATTGAGA GGAATCTAAT CCTTCTTGGT GCCACTGCTG TAGAGGACAA
GCTCCAAAAT GGGGTTCCTG ATTGTATCGA CAAGCTAGCC CAAGCTAAGA TTAAGATTTG GGTTTTGACT GGAGATAAAA
TGGAGACTGC CATCAATATT GGTTTCTCTT GTCGCTTGCT TAGACAAGGA ATGAAACAAA TTATAATTCA TTTGGATATT
CCAGAAATTC AAGCGTTAGA AAAGGTTGGA GACAAGATGG CTGTTGTGAA GGTATCAAGG GAAAGTGTGC ATCATCAGCT
ATCTGAAGGT GCTCAACTGC TTTTTGCATC CAGAGGGACT TGCCAGCAGA CATTTGCTCT GATCATTGAT GGAAAATCAC
TAACATATGC TCTAGAGGAT AATATGAAAA ACATGTTTCT AGAGCTTGCA AGTCATTGTG CATCTGTTAT CTGCTGCCGT
TCATCGCCAA AGCAGAAGGC TCTGGTTACT AGACTGGTCA AATCTGGAAC TGGTAAAACA ACATTAGCTA TTGGTGATGG
AGCTAATGAT GTCGGAATGC TTCAAGAAGC AGACGTAGGG ATTGGAATCA GTGGCGTCGA AGGAATGCAG GCCGTCATGT
CTAGTGATAT TGCAATTGCG CAGTTCAAGT ATTTGGAAAG ATTACTTCTT GTACATGGAC ATTGGTGTTA CCGGAGGATG
TCATCAATGA TATGCTATTT TTTCTTTAAG AACATCACAT TTGGATTCAC CCTATTCTTG TATGAGGTGT ATGCATCATT
CTCTGGACAG CCTGCATACA ATGACTGGTT TTTGTCTCTC TATAGTGTCT TCTTTTCGTC ACTTCCTGTA ATTGCCCTTG
GGGTCCTTGA CCAGGATGTA TCTGCCAGGT ACTGCCTGAA GTTTCCGATC TTATACCAAG AAGGGGTGCA AAATGTCCTC
TTTAGCTGGC GTATAGTACT TAGTTGGATG CTTAATGGAT TTATTAATGC CACAATGATA TTCTTCTTCT GCACAAAAGC
AATTGAGCCT CAGGCCTTTG ATGAGGAGGG AAGAACGGCC GGAAGGGATA TGCTGGGCGT GACAATGTAT ACTTGCGTGG
TTTGGGTGGT GAACTTGCAG ATGGCACTTG CTATACGTTA TTTCACCTTG ATACAACATA TTTTTATCTG GGGTTCCATT
GCTTTCTGGT ATCTTTTCCT CCTGGCATAT GGAGCAATGC CTCCAAAATT TTCTACAAAT GTTTATCAAG TCTTCATTGA
AACTCTCGCC ACATCTCCTT CCTTTTGGGC TGTGACATTC TTTGTGGCGA TCTCAACACT TATACCATAC TTCACATTCT
CAGTAATTCA GATGTGGTTC TTCCCCATGT ATCACCAAAT GGTACAGTGG ATAAGGTATG AGAGGAAGAC AAATGCCACT
GAATAAAAAT ACTGTGATAT AATGAGCAAA TATCATTATG GCCGACCACA ACGAGTTCAA CAGCACATTT TGCAGCTGAT
GCTAACCACA GATAGGCAGA ATTACTAACC ATAGATAATA TATGTATAGT GACATTCCAA AGGGTGTGTT AAGAGTTATA
ACTATTTGAC TGAAAAGTTA TTATAGTATA TATGGCAATG ATGGATGTTG GAACAATTGA GAATGACACG AAGTGAGTGT
AATTTAGTGA GATTTTGGTT GAGATATGTG ATCTATTATA TACCATCTAT TGTGTTTGGA TTAA

>Vigan.02G253400.01
ATGAGGGGTG GGAGAAAGAG GAGTATGATA AAGCTTAAGT TTAGCAAGAT CTACTCATTT GCTTGTGGTA GAACAACCTT
GAGGAGAGAA CATTCGCGGA TTGGGGGACA TGGTCATTCC AGGGTTGTTT TCTGCAATGA ACCTGATAGG TTTGAGGTAG
GGGTTTTGAA TTATGCTGAT AATTCTGTTA GGTCCACAAA ATACACGGTT GCTACTTTCT TGCCAAAGTC ACTTTTTGAG
CAGTTTAGGA GGGTGGCTAA TTTCTATTTC TTGGTGGCTG GGATCTTGGC CTTCACAAAG CTTACTCCTT ATACTGCTGT
CAGTGCTATC CTTCCACTCT CTATCATCAT TGGGGCAACT ATGGTGAAAG AGGGTATTGA AGACTGGCGC AGGAAAAAGC
AGGATATTGA GGTGAACAAG AGAAGAGTTA TATTGCATAA AGGTGATGGC ATTTTTGAAT ATACTGAATG GAAGAATCTG
AGAGTAGGGA ATATAGTGAA GATAATGAAG GATGAATTCT TCCCTGCTGA CCTCCTACTG CTTTCCTCCA GTTATGAGGA
TGCAGTATGC TATGTTGAGA CCATGAACTT GGATGGTGAA ACAAATTTGA AATTAAAACA AGGGTTGGAT GTAACTTCTT
CCTTACAGGA GGACTTCAAA ATATGTGATT TTAGAGCTGT CATCAAATGT GAGGACCCAA ATGCAAATCT GTATTCTTTT
GTTGGGAGCA TGGAGTTTGA AGAGCAAAAG TACCCTCTTT CTGCTCAGCA ACTTCTTCTA AGAGACTCCA AACTTCGCAA
TACAGACTAT GTGTTTGGAG CCGTCATCTT TACCGGTCAT GACACAAAGG TTATTCAAAA CTCCACTGAT CCTCCTTCAA
AAAGAAGCAA AATTGAGAAG AAGATGGATA AGATTATCTA CTTCTTGTTT TGTGTTTTAT TTCTAATTGC ATTTGTTGGA
TCTATTATCT TTGGCATCAT AACCAAAGGA GACCTGAAAA ATGGGTTGAT GAAAAGATGG TATCTAAGAC CAGATAGTTC
CACAATTTTC TTTGATCCAG AGAGAGCAGC TGCAGCTGCT ATATTTCATT CTTTAACAGC CTTAATGTTA TATAACTTCT
TTATTCCTAT CTCTCTGTAT TTCTCAATAG AAATTGTCAA AGTCCTTCAG AGCATCTTCA TCAATCAAGA TATCCACATG
TACTATGAAG AAGCAGACAA ACCAGCTCGT GCCCGTACTT CAAACTTGAA TGAGGAACTA GGCCAAGTTG ACACAATACT
TTCTGATAAA ACTGGGACTC TGACCTGCAA CTCAATGGAG TTCATCAAAT GTTCTGTTGC TGGGGTAGCT TATGGTCATG
GTGTAACAGA GGTTGAGCAA GTCACCGGAA GAAGTAACGG TTCACCTATT CTTCATGAGC ATATTAATGG TCTAAAATCA
AAATCTAATG AAATCGGGGA CTCTCGAGAT AGAAAAGAGC CTATTAAAGG TTTTAACTTT ACAGATGAAA GGATAATGAA
TGGGAACTGG GTTAATGAAC CTTTTGCTGA TGTTATACAA AAGTTTTTTC GCTTATTGGC AATTTGTCAT ACTGCCATAC
CAGAAGTGGA TGAAGAAACA GGAAATGTCT CATATGAGGC TGAATCTCCA GATGAAGCAG CATTTGTGAT TGCTGCAAGT
GAAGTTGGTT TTAAATTCTA CAAAAGGACC CAGAATTGCT TGTCAACGTA TGAGTTGGAT CCTGTTTCTG GTAATGAAGT
TGAAAGGACA TACAAGCTTC TCAATGTTTT AGAGTTTAGT AGTTCAAGGA AGCGAATGTC AGTGATAGTG AAAGATGAAG
AAGGGAGAAT TTTACTACTC TCTAAAGGTG CTGACAGTGT CATGTTTGAA AGGCTTGCCA ACAGTGGGAG GACGTTTGAA
GAGAAAACAA TGGAACATGT GCATCAATAT GCTGATGCAG GTCTAAGGAC TCTAATTCTT TCTTATCGTG AACTTGATGA
AGAAGAATTC AAGGAGTTTG ATGGTAAATT GTCTGAAGTA AAAAATTCAG TCTCAGAAGA CCGGGAAACA CTGATTGAAG
AATTATTGGA TACGATTGAG AGGAATCTAA TCCTTCTTGG TGCCACTGCT GTAGAGGACA AGCTCCAAAA TGGGGTTCCT
GATTGTATCG ACAAGCTAGC CCAAGCTAAG ATTAAGATTT GGGTTTTGAC TGGAGATAAA ATGGAGACTG CCATCAATAT
TGGTTTCTCT TGTCGCTTGC TTAGACAAGG AATGAAACAA ATTATAATTC ATTTGGATAT TCCAGAAATT CAAGCGTTAG
AAAAGGTTGG AGACAAGATG GCTGTTGTGA AGGTATCAAG GGAAAGTGTG CATCATCAGC TATCTGAAGG TGCTCAACTG
CTTTTTGCAT CCAGAGGGAC TTGCCAGCAG ACATTTGCTC TGATCATTGA TGGAAAATCA CTAACATATG CTCTAGAGGA
TAATATGAAA AACATGTTTC TAGAGCTTGC AAGTCATTGT GCATCTGTTA TCTGCTGCCG TTCATCGCCA AAGCAGAAGG
CTCTGGTTAC TAGACTGGTC AAATCTGGAA CTGGTAAAAC AACATTAGCT ATTGGTGATG GAGCTAATGA TGTCGGAATG
CTTCAAGAAG CAGACGTAGG GATTGGAATC AGTGGCGTCG AAGGAATGCA GGCCGTCATG TCTAGTGATA TTGCAATTGC
GCAGTTCAAG TATTTGGAAA GATTACTTCT TGTACATGGA CATTGGTGTT ACCGGAGGAT GTCATCAATG ATATGCTATT
TTTTCTTTAA GAACATCACA TTTGGATTCA CCCTATTCTT GTATGAGGTG TATGCATCAT TCTCTGGACA GCCTGCATAC
AATGACTGGT TTTTGTCTCT CTATAGTGTC TTCTTTTCGT CACTTCCTGT AATTGCCCTT GGGGTCCTTG ACCAGGATGT
ATCTGCCAGG TACTGCCTGA AGTTTCCGAT CTTATACCAA GAAGGGGTGC AAAATGTCCT CTTTAGCTGG CGTATAGTAC
TTAGTTGGAT GCTTAATGGA TTTATTAATG CCACAATGAT ATTCTTCTTC TGCACAAAAG CAATTGAGCC TCAGGCCTTT
GATGAGGAGG GAAGAACGGC CGGAAGGGAT ATGCTGGGCG TGACAATGTA TACTTGCGTG GTTTGGGTGG TGAACTTGCA
GATGGCACTT GCTATACGTT ATTTCACCTT GATACAACAT ATTTTTATCT GGGGTTCCAT TGCTTTCTGG TATCTTTTCC
TCCTGGCATA TGGAGCAATG CCTCCAAAAT TTTCTACAAA TGTTTATCAA GTCTTCATTG AAACTCTCGC CACATCTCCT
TCCTTTTGGG CTGTGACATT CTTTGTGGCG ATCTCAACAC TTATACCATA CTTCACATTC TCAGTAATTC AGATGTGGTT
CTTCCCCATG TATCACCAAA TGGTACAGTG GATAAGGTAT GAGAGGAAGA CAAATGCCAC TGAATAA

>Vigan.02G253400.01
MRGGRKRSMI KLKFSKIYSF ACGRTTLRRE HSRIGGHGHS RVVFCNEPDR FEVGVLNYAD NSVRSTKYTV ATFLPKSLFE
QFRRVANFYF LVAGILAFTK LTPYTAVSAI LPLSIIIGAT MVKEGIEDWR RKKQDIEVNK RRVILHKGDG IFEYTEWKNL
RVGNIVKIMK DEFFPADLLL LSSSYEDAVC YVETMNLDGE TNLKLKQGLD VTSSLQEDFK ICDFRAVIKC EDPNANLYSF
VGSMEFEEQK YPLSAQQLLL RDSKLRNTDY VFGAVIFTGH DTKVIQNSTD PPSKRSKIEK KMDKIIYFLF CVLFLIAFVG
SIIFGIITKG DLKNGLMKRW YLRPDSSTIF FDPERAAAAA IFHSLTALML YNFFIPISLY FSIEIVKVLQ SIFINQDIHM
YYEEADKPAR ARTSNLNEEL GQVDTILSDK TGTLTCNSME FIKCSVAGVA YGHGVTEVEQ VTGRSNGSPI LHEHINGLKS
KSNEIGDSRD RKEPIKGFNF TDERIMNGNW VNEPFADVIQ KFFRLLAICH TAIPEVDEET GNVSYEAESP DEAAFVIAAS
EVGFKFYKRT QNCLSTYELD PVSGNEVERT YKLLNVLEFS SSRKRMSVIV KDEEGRILLL SKGADSVMFE RLANSGRTFE
EKTMEHVHQY ADAGLRTLIL SYRELDEEEF KEFDGKLSEV KNSVSEDRET LIEELLDTIE RNLILLGATA VEDKLQNGVP
DCIDKLAQAK IKIWVLTGDK METAINIGFS CRLLRQGMKQ IIIHLDIPEI QALEKVGDKM AVVKVSRESV HHQLSEGAQL
LFASRGTCQQ TFALIIDGKS LTYALEDNMK NMFLELASHC ASVICCRSSP KQKALVTRLV KSGTGKTTLA IGDGANDVGM
LQEADVGIGI SGVEGMQAVM SSDIAIAQFK YLERLLLVHG HWCYRRMSSM ICYFFFKNIT FGFTLFLYEV YASFSGQPAY
NDWFLSLYSV FFSSLPVIAL GVLDQDVSAR YCLKFPILYQ EGVQNVLFSW RIVLSWMLNG FINATMIFFF CTKAIEPQAF
DEEGRTAGRD MLGVTMYTCV VWVVNLQMAL AIRYFTLIQH IFIWGSIAFW YLFLLAYGAM PPKFSTNVYQ VFIETLATSP
SFWAVTFFVA ISTLIPYFTF SVIQMWFFPM YHQMVQWIRY ERKTNATE*