GBrowse Details

Vigan.02G267500.01

Basic Information:
Name: Vigan.02G267500.01
Multiple alignment
Variant Information
Position: Chr02:37490323..37491871 (+ strand)
Length: 1549
Functional Information:
Description: Similar to Uncharacterized protein. [M5W2G3, Prunus persica]
GO: Biological Process: response to oxidative stress (GO:0006979)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: peroxidase activity (GO:0004601)
Molecular Function: heme binding (GO:0020037)
InterPro: Plant peroxidase (IPR000823)
Haem peroxidase, plant/fungal/bacterial (IPR002016)
Haem peroxidase (IPR010255)
Peroxidases heam-ligand binding site (IPR019793)
Peroxidase, active site (IPR019794)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,0.09,0.00,11.29,0.57,33.71,0.89
Arabidopsis thaliana homolog: AT2G41480.1
Automatic updates:
Name: NM_001255114 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max peroxidase 25-like (LOC100806700), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:37490323..37490440 (+ strand)
Length: 118
Type: five_prime_UTR
Position: Chr02:37490441..37490641 (+ strand)
Length: 201
Type: CDS
Position: Chr02:37490785..37490964 (+ strand)
Length: 180
Type: CDS
Position: Chr02:37491066..37491228 (+ strand)
Length: 163
Type: CDS
Position: Chr02:37491383..37491810 (+ strand)
Length: 428
Type: CDS
Position: Chr02:37491811..37491871 (+ strand)
Length: 61
Type: three_prime_UTR


>Vigan.02G267500.01
TGGAAGATCC ACTTCTTCCC ACTTAGAACA CCCTTATATA AGTGAGCAAA TGCTTGCAAC ATATATGAAG AAGGGAAAGT
GAATAATCAA ATACCAAATT GTTTGAAGTT AGCACCAAAT GGGAGACTTA TGGTTGGGTT CATTAACCAT TTTTTTGACC
ATTATGGGTT CACAGGGCCA GCTCAAAACC GGGTTTTACT CCTCTTCCTG CCCAAACGCA GAGGCCACGG TTCGGTCCAC
TGTTCAATCC TACTTCAATA AAGATCCTAC CATTGCTCCT GCCCTTCTCA GGCTTCACTT CCATGATTGC TTTGTTCAGG
GCTGCGATGG TTCAGTTTTG ATTGCAGGCT CTTCTGCAGA GAGGAATGCG TTACCTAACA CTGGTCTAAG AGGTTTTGAA
GTGATTGAGG ATGCAAAATC ACAACTTGAG GCCAAGTGTC CTGGTGTTGT CTCATGTGCT GACATACTAG CATTGGCAGC
ACGTGATGCA GTAGACTTGA GTGATGGTCC AAGTTGGTCA GTAGCTACAG GAAGAAGAGA TGGGAGGGTT TCTTTATCAT
CTCAAGCTTC AAACTTGCCA TCTCCACTTG ACCCTATTTC TGTGCAAAGG AAAAAGTTTT CTGACAAAGG CCTAGATGAT
CATGACCTTG TAACCCTTGT TGGGGCACAT ACCATAGGTC AAACTGAATG CAGATTCTTC AGCTACCGAT TGTATAATTT
CACCACCACT GGGAATTCAG ATCCAACTAT AGACCAAGAT TTCTTAGGCC AACTTAAAGC ACTGTGTCCA AATAAAGGAG
ATGGCTTGAA AAGGGTGTCG TTGGACATAG ATAGTCCGAC CAAATTTGAT GTTAGTTTCT TCAAAAATGT GCGCGATGGT
AATGCAATTC TAGAGTCAGA TCAGAGGCTG TGGGGAGACC CTGCTACACA AAGTATAGTG CAGAATTATG CAGGGAATAT
AAGAGGGTTA TTGGGGTTAC GATTTAATTA CGAATTTCCC AAGGCTATGG TTAAACTGAG TAGTGTAGAG GTGAAGACTG
GTACTCAAGG AGAGATTAGA AAGGTCTGCT CAAAAGTTAA TTTATATTAA ACAATTATCT GTGAGTATTC AGTAACTTAT
GCTTTGCTTG GGTTGAATAA TTTGTAATGT T

>Vigan.02G267500.01
ATGGGAGACT TATGGTTGGG TTCATTAACC ATTTTTTTGA CCATTATGGG TTCACAGGGC CAGCTCAAAA CCGGGTTTTA
CTCCTCTTCC TGCCCAAACG CAGAGGCCAC GGTTCGGTCC ACTGTTCAAT CCTACTTCAA TAAAGATCCT ACCATTGCTC
CTGCCCTTCT CAGGCTTCAC TTCCATGATT GCTTTGTTCA GGGCTGCGAT GGTTCAGTTT TGATTGCAGG CTCTTCTGCA
GAGAGGAATG CGTTACCTAA CACTGGTCTA AGAGGTTTTG AAGTGATTGA GGATGCAAAA TCACAACTTG AGGCCAAGTG
TCCTGGTGTT GTCTCATGTG CTGACATACT AGCATTGGCA GCACGTGATG CAGTAGACTT GAGTGATGGT CCAAGTTGGT
CAGTAGCTAC AGGAAGAAGA GATGGGAGGG TTTCTTTATC ATCTCAAGCT TCAAACTTGC CATCTCCACT TGACCCTATT
TCTGTGCAAA GGAAAAAGTT TTCTGACAAA GGCCTAGATG ATCATGACCT TGTAACCCTT GTTGGGGCAC ATACCATAGG
TCAAACTGAA TGCAGATTCT TCAGCTACCG ATTGTATAAT TTCACCACCA CTGGGAATTC AGATCCAACT ATAGACCAAG
ATTTCTTAGG CCAACTTAAA GCACTGTGTC CAAATAAAGG AGATGGCTTG AAAAGGGTGT CGTTGGACAT AGATAGTCCG
ACCAAATTTG ATGTTAGTTT CTTCAAAAAT GTGCGCGATG GTAATGCAAT TCTAGAGTCA GATCAGAGGC TGTGGGGAGA
CCCTGCTACA CAAAGTATAG TGCAGAATTA TGCAGGGAAT ATAAGAGGGT TATTGGGGTT ACGATTTAAT TACGAATTTC
CCAAGGCTAT GGTTAAACTG AGTAGTGTAG AGGTGAAGAC TGGTACTCAA GGAGAGATTA GAAAGGTCTG CTCAAAAGTT
AATTTATATT AA

>Vigan.02G267500.01
MGDLWLGSLT IFLTIMGSQG QLKTGFYSSS CPNAEATVRS TVQSYFNKDP TIAPALLRLH FHDCFVQGCD GSVLIAGSSA
ERNALPNTGL RGFEVIEDAK SQLEAKCPGV VSCADILALA ARDAVDLSDG PSWSVATGRR DGRVSLSSQA SNLPSPLDPI
SVQRKKFSDK GLDDHDLVTL VGAHTIGQTE CRFFSYRLYN FTTTGNSDPT IDQDFLGQLK ALCPNKGDGL KRVSLDIDSP
TKFDVSFFKN VRDGNAILES DQRLWGDPAT QSIVQNYAGN IRGLLGLRFN YEFPKAMVKL SSVEVKTGTQ GEIRKVCSKV
NLY*