GBrowse Details

Vigan.02G270100.01

Basic Information:
Name: Vigan.02G270100.01
Multiple alignment
Variant Information
Position: Chr02:37748220..37752306 (+ strand)
Length: 4087
Functional Information:
Description: Similar to Uncharacterized protein. [I1JW77, Glycine max]
GO: Biological Process: protein methylation (GO:0006479)
Molecular Function: methyltransferase activity (GO:0008168)
InterPro: Protein arginine N-methyltransferase (IPR025799)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:19.55,38.88,17.40,13.18,26.11,15.55,26.04,18.74
Arabidopsis thaliana homolog: AT1G04870.2
Automatic updates:
Name: NM_001255340 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max probable protein arginine N-methyltransferase 4.2-like (LOC100790625), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:37748220..37748311 (+ strand)
Length: 92
Type: five_prime_UTR
Position: Chr02:37748312..37748497 (+ strand)
Length: 186
Type: CDS
Position: Chr02:37748926..37749118 (+ strand)
Length: 193
Type: CDS
Position: Chr02:37749480..37749585 (+ strand)
Length: 106
Type: CDS
Position: Chr02:37750274..37750463 (+ strand)
Length: 190
Type: CDS
Position: Chr02:37750924..37751109 (+ strand)
Length: 186
Type: CDS
Position: Chr02:37751197..37751280 (+ strand)
Length: 84
Type: CDS
Position: Chr02:37751880..37752056 (+ strand)
Length: 177
Type: CDS
Position: Chr02:37752057..37752306 (+ strand)
Length: 250
Type: three_prime_UTR


>Vigan.02G270100.01
CAGAGGCAAG GCTGTAGTGC CGCGAAAGTT AGCATGCCCT AAAAGTTGAA CGGAGCAGAG AGAGCAACGG CGCAAGGGCG
AGTGTGTGTA AGATGGGAAC CTCTGCAAAC GCTGCTCCCG GTGGTCGGGG CGCCCCTGTT CCCAAAGACG TTGACTTCGC
CAATTACTTC TGCACCTATG CTTTCCTCTA CCACCAGAAG GATATGCTCT CGGATCGTGT TCGCATGGAC GCTTACTTCA
ACGCCATCTT TGAGAACAAA AACCACTTCG CTGGCAAGAC TGTTTTGGAT GTGGGGACTG GAAGTGGCAT TCTTGCTATA
TGGTCAGCGC AAGCGGGCGC GAGGAAGGTG TATGCAGTGG AAGCGACGAA GATGTCAGAA CATGCCCGTG CACTCGTCAA
AGCGAATAAT CTCCACAATG TAGTTGAGGT CATCGAGGGA TCAATGGAGG ATGTTACCTT GCCTGAGAAA GTTGACGTGA
TAATCTCTGA GTGGATGGGT TATTTTCTTC TGCGAGAATC CATGTTTGAT TCAGTTATAC ATGCTCGTGA CCACTGGCTC
AAACCGACAG GAGTGATGTA TCCTAGTCAT GCTCGCATGT GGATGGCACC CATCAGGACT GGGATAGTTG ATCACAAATC
AGGAGAATAT GAATCAACTA TGGATGATTG GAACAACTTC GTTGATGAAA CAAAAACCTA CTATGGTGTT GATATGAGCA
CTTTAACAAA GCCTTTTTCA GATGAGCAAA GAAAATACTA TCTTCAGACA TCTTTGTGGA ACAACCTTCA TCCACATCAA
GTCATTGGAA CTGCTGCTAT AATAAAGGAA ATTGATTGTT TAACTGCCAC AGTGGCTGAC ATAGAAAAAG TTAGATCAAA
CTTTTCTTTG TCAATAACCA TGGAAAACGC AAAGTTGTGT GGATTTGGAG GGTGGTTTGA TGTACATTTT CGGGGAAGAA
GTGAGGATCC AGCTAAACAG GAGATTGAGT TAACTACAGC TCCTAGTGTG GATTACGGTA CACATTGGGG CCAACAGGTT
TTTCTTTTGC ATCCTCCTAT GAATCTCAGT GAAGGTGATG ATTTAAAGGT TTCTTTTCTG ATGAGTCGCT CGAAGGCGAA
TCATCGTTTG ATGGAGGTTG AACTTGGATG TGAGATTCAT CAGCATTCCG GCAAGCTACT TGCACCTTTC AAAAATAAGT
ACTACATTGA GTAACAATTT GGATTCCAAA TTCTAGGGAC TACAGGATAC ATGTCAGATT CTATTGCTCT TCATGCTTTG
AATGATGATA TCATATAATT ATATCCCCAG GTCTATTGTA TCTTTTTGGT GGAATGGTCT TTAATAGTCT TCTTTTCCAC
AAGTACTTCT AATATTTTTA TGCAAGGTTT TCGATTATAT ACCAAGTTGT ATCCAAACAT AATATCAGTA GAGAAATGCA
ATGAGTTTTT TTTTGTCAGA AAAA

>Vigan.02G270100.01
ATGGGAACCT CTGCAAACGC TGCTCCCGGT GGTCGGGGCG CCCCTGTTCC CAAAGACGTT GACTTCGCCA ATTACTTCTG
CACCTATGCT TTCCTCTACC ACCAGAAGGA TATGCTCTCG GATCGTGTTC GCATGGACGC TTACTTCAAC GCCATCTTTG
AGAACAAAAA CCACTTCGCT GGCAAGACTG TTTTGGATGT GGGGACTGGA AGTGGCATTC TTGCTATATG GTCAGCGCAA
GCGGGCGCGA GGAAGGTGTA TGCAGTGGAA GCGACGAAGA TGTCAGAACA TGCCCGTGCA CTCGTCAAAG CGAATAATCT
CCACAATGTA GTTGAGGTCA TCGAGGGATC AATGGAGGAT GTTACCTTGC CTGAGAAAGT TGACGTGATA ATCTCTGAGT
GGATGGGTTA TTTTCTTCTG CGAGAATCCA TGTTTGATTC AGTTATACAT GCTCGTGACC ACTGGCTCAA ACCGACAGGA
GTGATGTATC CTAGTCATGC TCGCATGTGG ATGGCACCCA TCAGGACTGG GATAGTTGAT CACAAATCAG GAGAATATGA
ATCAACTATG GATGATTGGA ACAACTTCGT TGATGAAACA AAAACCTACT ATGGTGTTGA TATGAGCACT TTAACAAAGC
CTTTTTCAGA TGAGCAAAGA AAATACTATC TTCAGACATC TTTGTGGAAC AACCTTCATC CACATCAAGT CATTGGAACT
GCTGCTATAA TAAAGGAAAT TGATTGTTTA ACTGCCACAG TGGCTGACAT AGAAAAAGTT AGATCAAACT TTTCTTTGTC
AATAACCATG GAAAACGCAA AGTTGTGTGG ATTTGGAGGG TGGTTTGATG TACATTTTCG GGGAAGAAGT GAGGATCCAG
CTAAACAGGA GATTGAGTTA ACTACAGCTC CTAGTGTGGA TTACGGTACA CATTGGGGCC AACAGGTTTT TCTTTTGCAT
CCTCCTATGA ATCTCAGTGA AGGTGATGAT TTAAAGGTTT CTTTTCTGAT GAGTCGCTCG AAGGCGAATC ATCGTTTGAT
GGAGGTTGAA CTTGGATGTG AGATTCATCA GCATTCCGGC AAGCTACTTG CACCTTTCAA AAATAAGTAC TACATTGAGT
AA

>Vigan.02G270100.01
MGTSANAAPG GRGAPVPKDV DFANYFCTYA FLYHQKDMLS DRVRMDAYFN AIFENKNHFA GKTVLDVGTG SGILAIWSAQ
AGARKVYAVE ATKMSEHARA LVKANNLHNV VEVIEGSMED VTLPEKVDVI ISEWMGYFLL RESMFDSVIH ARDHWLKPTG
VMYPSHARMW MAPIRTGIVD HKSGEYESTM DDWNNFVDET KTYYGVDMST LTKPFSDEQR KYYLQTSLWN NLHPHQVIGT
AAIIKEIDCL TATVADIEKV RSNFSLSITM ENAKLCGFGG WFDVHFRGRS EDPAKQEIEL TTAPSVDYGT HWGQQVFLLH
PPMNLSEGDD LKVSFLMSRS KANHRLMEVE LGCEIHQHSG KLLAPFKNKY YIE*