GBrowse Details

Vigan.02G287500.01

Basic Information:
Name: Vigan.02G287500.01
Multiple alignment
Variant Information
Position: Chr02:39886209..39890756 (- strand)
Length: 4548
Functional Information:
Description: Similar to Uncharacterized protein. [K7LCL1, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Cellular Component: endoplasmic reticulum (GO:0005783)
Molecular Function: protein disulfide isomerase activity (GO:0003756)
Molecular Function: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (GO:0016671)
InterPro: Endoplasmic reticulum oxidoreductin 1 (IPR007266)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:22.34,22.69,9.92,8.18,66.32,24.26,24.66,10.92
Arabidopsis thaliana homolog: AT1G72280.1, AT2G38960.3
Automatic updates:
Name: AB622258 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max Gm ero1b mRNA for ER oxidoreductin 1b, complete cds.
PubMed ID: 26645455 NCBI(pubmed)
Status: Known Variant
Name: NM_001317680 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max endoplasmic reticulum oxidoreductin-1 (LOC100783071), mRNA.
PubMed ID: 26645455 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr02:39886209..39886710 (- strand)
Length: 502
Type: three_prime_UTR
Position: Chr02:39886711..39886893 (- strand)
Length: 183
Type: CDS
Position: Chr02:39886991..39887114 (- strand)
Length: 124
Type: CDS
Position: Chr02:39887607..39887809 (- strand)
Length: 203
Type: CDS
Position: Chr02:39887949..39888053 (- strand)
Length: 105
Type: CDS
Position: Chr02:39888269..39888387 (- strand)
Length: 119
Type: CDS
Position: Chr02:39888720..39888830 (- strand)
Length: 111
Type: CDS
Position: Chr02:39889263..39889515 (- strand)
Length: 253
Type: CDS
Position: Chr02:39889990..39890121 (- strand)
Length: 132
Type: CDS
Position: Chr02:39890290..39890448 (- strand)
Length: 159
Type: CDS
Position: Chr02:39890449..39890756 (- strand)
Length: 308
Type: five_prime_UTR


>Vigan.02G287500.01
GAAAAAAATA ATGAAATGGA CTCCTATTGG TTGAAACACG TAACCACACG CAGCCACCAC GGTGTCCGAA TTTGACACTG
GAATTTTCTT ACGAACACTG TTTTGCACAA ACCAAAAATC GAAACCAACA ACCGCCCATT TATTTAACTC CGACGACCTT
GACTGCTGCA AACAGCAAAA ACTGCCCTCA ACTTAGTACC TTGTAGAACG CTTCCATTTC CCCTTCGAAA TTCACGACAC
TGGGATCCGT CGAAGAACGC CAAAAATCTC GGTGCTTTGT TTCGGAAGCA CCGGCATTGG AAACTGTGAT GGTGGAAACG
GAGCCTAAGA AGAAGGGTTG GGGAGTGCCA TGGCTTTGGG TTCTGATGTC TCTCGTGGCT GTGTTTGTTG CTATGGCTGT
GTCGTCTAAA ACTTCTACCA GAATTTCTCT GTCTGGAGCC ATTGATAGAG CTTGTCAGTG TGCCCGGGGT GCACCGAAGT
TCAGTGGCAT GGTAGAGGAC TGTTGTTGTG ATTACGAAAC TGTGGACCAT CTCAATGAGG AAGTGTTGAA CCCTTCCCTC
CAAGAACTCG TGAAGACCCC TTTCTTTCGA TATTTTAAGG TGAAATTATG GTGTGACTGT CCTTTCTGGC CCGATGACGG
CATGTGCCGG TTGCGGGACT GTAGTGTATG TGAATGTCCA GAAAGTGAAT TCCCTGAATC ATTTAAGAAG CCACATGCCT
TCTCAATGAA TGATCTTGTT TGTCAAGAAG GTAAACCTCA GGCAGCTGTT GACCGTACTT TAGACAGTAA AGTTTTCAGA
GGATGGACAG AAATAGACAA TCCATGGACA AATGATGATG AGACAGACAA CGACGAGATG ACATACGTGA ATCTTCAACT
GAATCCTGAA AGGTATACTG GTTACTCTGG TGCTTCTGCA AGAAGGATAT GGGATGCTGT CTACTCTGAG AACTGCCCCA
AATATCCGTC TCAAGAGTTA TGCCAAGAGG AAAAGATTTT GTATAAATTG ATATCCGGTC TTCACTCCTC CATATCAGTA
CATATAGCTG CTGAGTATCT ACTTGATGAA ACTTCAAATT TGTGGGGCCA AAATCTTACT TTGGTGTATG ATCGAGTCCT
AAAATACCCT GATCGTGTCA GCAATTTGTA TTTCACTTTT CTCTTTGTGC TGCGAGCAGT GACCAAGGCT GCAGATTATC
TGGAACAGGC AGAGTATGAT ACAGGTAACC ATTATGAGGA CCTTAAGACA CAGTCCTTGA TAAAACAGGT ACTTCATAAC
CCCAAGCTTC AAGCTGCTTG TCCGATTCCA TTTGATGAAG CTAATTTGTG GAGAGGCCAA AGTGGACCTG AGCTAAAACT
GCAAATTCAA CAACAATTTA GAAACATCAG TGCATTGATG GATTGTATAG GATGTGAGAA GTGTCGATTA TGGGGTAAGC
TTCAGGTTCT TGGTCTTGGA ACTGCATTAA AGATTCTCTT CTCTGTTGAT GGTCAAGAAA ACTCAAGTCA AACACTGCAG
CTGCAAAGGA ATGAGGTAAT TGCATTGATG AACCTTCTGA ATCGGCTTTC AGAATCTGTC AAATTTGTCC GTGAAGTGGG
ACCTGCAGCT GATAGTGTGA TGGAAGGACA TGTTTCTGCT CATAAAACAC TGATTAACGC ATGGAAAAAA ATTTGGTCCT
TTGTATCTAA AACTTAGGTA AGATGCTCTC TTCTCAGTAT TTGTTGTATC AGTCTATGAT GTACCAAACT GAGTATTAGA
TGTTTTTGCA TCTGCAGGCT GGGTGAGTGG TGACAGTTCT GTTTTCTGTG ATTCAAATTA CTTCATAGGT TATACATAGA
AAACCACTGT CATAGTTGGG AAACTAATGT ACTTAGAGTG TCTCAAAATG GAAAATAAAT TGGTTAGAGT ATAGGGGGAA
AGATTAAGTG AAAGTAATAG AAAATATATT ACTTGGGAAT TTGGGGTTTA ATCCCCTTCC CCACTGATTT TGTAGTTCAA
TATTTCTTGC AATATCTGTG CAACATTTCT CCTTGTGTCT TGAGGAAAGG AAACAAAGAA ACAATCACAC ACCTCCACAC
TTTTTGGAGT TGTAGAGAAA GAGTATTGAC AAAAACAGTG AACATGATGT TTGTTTCCTT CGACATGATA GGTTGGTTAT
CAACTGAGTG AATCATAAAT AAGTATTGGT AAAAAATTG

>Vigan.02G287500.01
ATGGTGGAAA CGGAGCCTAA GAAGAAGGGT TGGGGAGTGC CATGGCTTTG GGTTCTGATG TCTCTCGTGG CTGTGTTTGT
TGCTATGGCT GTGTCGTCTA AAACTTCTAC CAGAATTTCT CTGTCTGGAG CCATTGATAG AGCTTGTCAG TGTGCCCGGG
GTGCACCGAA GTTCAGTGGC ATGGTAGAGG ACTGTTGTTG TGATTACGAA ACTGTGGACC ATCTCAATGA GGAAGTGTTG
AACCCTTCCC TCCAAGAACT CGTGAAGACC CCTTTCTTTC GATATTTTAA GGTGAAATTA TGGTGTGACT GTCCTTTCTG
GCCCGATGAC GGCATGTGCC GGTTGCGGGA CTGTAGTGTA TGTGAATGTC CAGAAAGTGA ATTCCCTGAA TCATTTAAGA
AGCCACATGC CTTCTCAATG AATGATCTTG TTTGTCAAGA AGGTAAACCT CAGGCAGCTG TTGACCGTAC TTTAGACAGT
AAAGTTTTCA GAGGATGGAC AGAAATAGAC AATCCATGGA CAAATGATGA TGAGACAGAC AACGACGAGA TGACATACGT
GAATCTTCAA CTGAATCCTG AAAGGTATAC TGGTTACTCT GGTGCTTCTG CAAGAAGGAT ATGGGATGCT GTCTACTCTG
AGAACTGCCC CAAATATCCG TCTCAAGAGT TATGCCAAGA GGAAAAGATT TTGTATAAAT TGATATCCGG TCTTCACTCC
TCCATATCAG TACATATAGC TGCTGAGTAT CTACTTGATG AAACTTCAAA TTTGTGGGGC CAAAATCTTA CTTTGGTGTA
TGATCGAGTC CTAAAATACC CTGATCGTGT CAGCAATTTG TATTTCACTT TTCTCTTTGT GCTGCGAGCA GTGACCAAGG
CTGCAGATTA TCTGGAACAG GCAGAGTATG ATACAGGTAA CCATTATGAG GACCTTAAGA CACAGTCCTT GATAAAACAG
GTACTTCATA ACCCCAAGCT TCAAGCTGCT TGTCCGATTC CATTTGATGA AGCTAATTTG TGGAGAGGCC AAAGTGGACC
TGAGCTAAAA CTGCAAATTC AACAACAATT TAGAAACATC AGTGCATTGA TGGATTGTAT AGGATGTGAG AAGTGTCGAT
TATGGGGTAA GCTTCAGGTT CTTGGTCTTG GAACTGCATT AAAGATTCTC TTCTCTGTTG ATGGTCAAGA AAACTCAAGT
CAAACACTGC AGCTGCAAAG GAATGAGGTA ATTGCATTGA TGAACCTTCT GAATCGGCTT TCAGAATCTG TCAAATTTGT
CCGTGAAGTG GGACCTGCAG CTGATAGTGT GATGGAAGGA CATGTTTCTG CTCATAAAAC ACTGATTAAC GCATGGAAAA
AAATTTGGTC CTTTGTATCT AAAACTTAG

>Vigan.02G287500.01
MVETEPKKKG WGVPWLWVLM SLVAVFVAMA VSSKTSTRIS LSGAIDRACQ CARGAPKFSG MVEDCCCDYE TVDHLNEEVL
NPSLQELVKT PFFRYFKVKL WCDCPFWPDD GMCRLRDCSV CECPESEFPE SFKKPHAFSM NDLVCQEGKP QAAVDRTLDS
KVFRGWTEID NPWTNDDETD NDEMTYVNLQ LNPERYTGYS GASARRIWDA VYSENCPKYP SQELCQEEKI LYKLISGLHS
SISVHIAAEY LLDETSNLWG QNLTLVYDRV LKYPDRVSNL YFTFLFVLRA VTKAADYLEQ AEYDTGNHYE DLKTQSLIKQ
VLHNPKLQAA CPIPFDEANL WRGQSGPELK LQIQQQFRNI SALMDCIGCE KCRLWGKLQV LGLGTALKIL FSVDGQENSS
QTLQLQRNEV IALMNLLNRL SESVKFVREV GPAADSVMEG HVSAHKTLIN AWKKIWSFVS KT*