GBrowse Details

Vigan.02G312400.01

Basic Information:
Name: Vigan.02G312400.01
Multiple alignment
Variant Information
Position: Chr02:42932086..42934046 (+ strand)
Length: 1961
Functional Information:
Description: Similar to Uncharacterized protein. [I1L1B0, Glycine max]
GO: Biological Process: response to oxidative stress (GO:0006979)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: peroxidase activity (GO:0004601)
Molecular Function: heme binding (GO:0020037)
InterPro: Plant peroxidase (IPR000823)
Haem peroxidase, plant/fungal/bacterial (IPR002016)
Haem peroxidase (IPR010255)
Peroxidases heam-ligand binding site (IPR019793)
Peroxidase, active site (IPR019794)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.17,0.05,0.00,0.00,0.00,0.00,9.86,0.00
Arabidopsis thaliana homolog: AT2G18980.1
Automatic updates:
Name: BT096771 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-15B10 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:42932086..42932232 (+ strand)
Length: 147
Type: five_prime_UTR
Position: Chr02:42932233..42932448 (+ strand)
Length: 216
Type: CDS
Position: Chr02:42932564..42932761 (+ strand)
Length: 198
Type: CDS
Position: Chr02:42932884..42933049 (+ strand)
Length: 166
Type: CDS
Position: Chr02:42933454..42933860 (+ strand)
Length: 407
Type: CDS
Position: Chr02:42933861..42934046 (+ strand)
Length: 186
Type: three_prime_UTR


>Vigan.02G312400.01
AATCCTTTTC AATCTCATCC CATTTTTTTA TCATTACATG TGATATATAT ATACATATAT GTTTTTGTAT ATATGATATA
TATTACAATG TGCAGCATAA GAATGAATTG ATAGCAGCAA AAAGTAAAAA GAAGTGAAGA AGTAGTGATG GGGGATCATA
GCTTTCTTGT GATTTTTTCA TCCTTGTTGG TTCTCATAAT TTGTGCAGAC ACAAGCTTAG CTCAACTTAC TCCAGGTTTC
TACAGAAAGA CATGCCCCAA TGTGGAACGC TTGGTTCGTT CTGCTGTGGA GTTGAAGTTT CAGCAGACCT TTGTGACTGC
TCCTGCTACT CTCAGACTCT TCTTCCATGA TTGCTTTGTG AGGGGTTGTG ATGCTTCCAT TTTGCTTGCA TCTCCAAATA
ATAAGGCAGA GAAAGATCAC CCTGATGACA TTTCTCTAGC TGGGGATGGT TTTGACACAG TGGCTAAAGC CAAGGCAGCT
GTTGACAGTG TCCCTCAGTG CAGAAACAAA GTCTCTTGTG CTGATATACT TGCTCTGGCT ACCAGAGATG TCGTAAATTT
GGCTGGGGGA CCATTTTATA GAGTTGAATT GGGAAGGCGT GATGGGAGAA TATCTACTAT TGCCAGTGTT CAACGTCGTC
TTCCTCATCC TCATTTCAAT TTAGATCAGC TAAATTCCAT GTTTTCTTCC AATGGCCTCA CCCAAACAGA TATGATTGCC
TTATCAGGTG CACATACTAT TGGATTCTCT CACTGTGGTC ACTTCTCAAA ACGGATCTAC AATTTCAGTC CCAGAAAACC
AATCGACCCA ACATTAAACT TACAATATGC CTTAAAACTT AGAGAGGCAT GCCCTCTGAG AGTTGATTCT AGAATTGCCA
TAAACATGGA CCCTATGACA CCCCAAAAGT TTGATAACCA ATACTTCAAG AATCTGCAGC AAGGAAAGGG TCTATTCAGT
TCTGATCAGG TCCTGGCTAC AGATGAAAGA TCAAAGGGCA CAATCAACTT ATTTGCATCA AGTCAACTAG CTTTTAACAA
TGCTTTTGTT CAAGCTATCA CTAAGATGGG AAGAATAGGT GTCAAGACAG GAAGACAAGG GGAAATAAGG TCTGATTGTT
TCAGGGTTAA CTGAGAAACT GAAATCATGA CATGCTCTCT ACAAAAATGT TTGTAAGATG ATTCTATCAT ACTCAAGTTC
TGAAAAAGTG AGACTAGTGT AATAAATGTT GATTCTATTG TAGTAAACTA AAGCAACTGC TTTAACTGAC GTGTGTCAGT
TATACTGTGC CCTATGCACC GCTTATATAC TCTCTTACTA 

>Vigan.02G312400.01
ATGGGGGATC ATAGCTTTCT TGTGATTTTT TCATCCTTGT TGGTTCTCAT AATTTGTGCA GACACAAGCT TAGCTCAACT
TACTCCAGGT TTCTACAGAA AGACATGCCC CAATGTGGAA CGCTTGGTTC GTTCTGCTGT GGAGTTGAAG TTTCAGCAGA
CCTTTGTGAC TGCTCCTGCT ACTCTCAGAC TCTTCTTCCA TGATTGCTTT GTGAGGGGTT GTGATGCTTC CATTTTGCTT
GCATCTCCAA ATAATAAGGC AGAGAAAGAT CACCCTGATG ACATTTCTCT AGCTGGGGAT GGTTTTGACA CAGTGGCTAA
AGCCAAGGCA GCTGTTGACA GTGTCCCTCA GTGCAGAAAC AAAGTCTCTT GTGCTGATAT ACTTGCTCTG GCTACCAGAG
ATGTCGTAAA TTTGGCTGGG GGACCATTTT ATAGAGTTGA ATTGGGAAGG CGTGATGGGA GAATATCTAC TATTGCCAGT
GTTCAACGTC GTCTTCCTCA TCCTCATTTC AATTTAGATC AGCTAAATTC CATGTTTTCT TCCAATGGCC TCACCCAAAC
AGATATGATT GCCTTATCAG GTGCACATAC TATTGGATTC TCTCACTGTG GTCACTTCTC AAAACGGATC TACAATTTCA
GTCCCAGAAA ACCAATCGAC CCAACATTAA ACTTACAATA TGCCTTAAAA CTTAGAGAGG CATGCCCTCT GAGAGTTGAT
TCTAGAATTG CCATAAACAT GGACCCTATG ACACCCCAAA AGTTTGATAA CCAATACTTC AAGAATCTGC AGCAAGGAAA
GGGTCTATTC AGTTCTGATC AGGTCCTGGC TACAGATGAA AGATCAAAGG GCACAATCAA CTTATTTGCA TCAAGTCAAC
TAGCTTTTAA CAATGCTTTT GTTCAAGCTA TCACTAAGAT GGGAAGAATA GGTGTCAAGA CAGGAAGACA AGGGGAAATA
AGGTCTGATT GTTTCAGGGT TAACTGA

>Vigan.02G312400.01
MGDHSFLVIF SSLLVLIICA DTSLAQLTPG FYRKTCPNVE RLVRSAVELK FQQTFVTAPA TLRLFFHDCF VRGCDASILL
ASPNNKAEKD HPDDISLAGD GFDTVAKAKA AVDSVPQCRN KVSCADILAL ATRDVVNLAG GPFYRVELGR RDGRISTIAS
VQRRLPHPHF NLDQLNSMFS SNGLTQTDMI ALSGAHTIGF SHCGHFSKRI YNFSPRKPID PTLNLQYALK LREACPLRVD
SRIAINMDPM TPQKFDNQYF KNLQQGKGLF SSDQVLATDE RSKGTINLFA SSQLAFNNAF VQAITKMGRI GVKTGRQGEI
RSDCFRVN*