GBrowse Details

Vigan.02G325500.01

Basic Information:
Name: Vigan.02G325500.01
Multiple alignment
Variant Information
Position: Chr02:44222443..44227165 (+ strand)
Length: 4723
Functional Information:
Description: Similar to Uncharacterized protein. [I1MGK8, Glycine max]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:26.23,14.58,19.45,4.98,64.36,11.10,19.42,14.50
Arabidopsis thaliana homolog: AT4G15790.1
Automatic updates:
Name: NM_001250587 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306099 (LOC100306099), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:44222443..44222694 (+ strand)
Length: 252
Type: five_prime_UTR
Position: Chr02:44222695..44222730 (+ strand)
Length: 36
Type: CDS
Position: Chr02:44222818..44222856 (+ strand)
Length: 39
Type: CDS
Position: Chr02:44222943..44222996 (+ strand)
Length: 54
Type: CDS
Position: Chr02:44223120..44223173 (+ strand)
Length: 54
Type: CDS
Position: Chr02:44226580..44226633 (+ strand)
Length: 54
Type: CDS
Position: Chr02:44226708..44226779 (+ strand)
Length: 72
Type: CDS
Position: Chr02:44226897..44227019 (+ strand)
Length: 123
Type: CDS
Position: Chr02:44227020..44227165 (+ strand)
Length: 146
Type: three_prime_UTR


>Vigan.02G325500.01
ATAAGAGGCT TTGCAACTTG GTTGTGTATT TCCAAATCCC GCCCAATTGG ATATCTTTAT CCTTGTTTTT TCAAAATTTG
TGCTCGTTTC TTGTCTGTTG TGACTTTAAC GTTGGTGTTT CTTTCTAGAG TCTTGTTCGG AACACTCACC AAACCACGCT
CCTCTTCAAA TTCATATATA CCCAGACAAA CCCTAGAACA ACAAACAATA CAAAACAAAT CCTCTTTTCC CAAATCTTCC
ATCCCATCCT CAATGGCCAA CTCAGATTCA TCTCTTCCTC TATCCACCAA GAAGGAGAAC GTCACTCCCG TTACGTCTAA
AATCGCGGAA CTTAATGAAT CGAGATCGGA GCTTCTCGGA AGAATTCAGA GTTTGAAAAA GGATTTGCAA AGTTGGAGGT
TTAAATTAGA TACACAAGTC AAGGTCTATC GCGATGAGCT GTCAGAACTT AAGAAAACAC TTAATGTTGA AGTGGACCAA
CTTCGAGTAG AATTTCAAGA TTTGAGGGCT ACCCTTCAGC AGCAACAAGA GGATGTTACT GCTAGCTTAA GAAACTTGGG
GCTTCAGGAT GCCTCAGACG TCAAGCATGC TCCAGCACAG GAGACAAAGA TTGAAGAAGT TGACAAAGAA GAACATGAGG
TGGTAGCAGG AGAAGATAAT AACATTGAAG TAGCTGAAAA TTAAACGGCC TTTAATTTGG AGTATTAGTG TTACACCCTG
GATAAGCAGA ATGACTCTGC AGTATTGTTA GATATTTGAT GTGTTTCATT ACTACTATTG GTTGTAATAT AGAACTTTAA
ATCAATGGTA AATTTCCCGT TACCCCTCCT 

>Vigan.02G325500.01
ATGGCCAACT CAGATTCATC TCTTCCTCTA TCCACCAAGA AGGAGAACGT CACTCCCGTT ACGTCTAAAA TCGCGGAACT
TAATGAATCG AGATCGGAGC TTCTCGGAAG AATTCAGAGT TTGAAAAAGG ATTTGCAAAG TTGGAGGTTT AAATTAGATA
CACAAGTCAA GGTCTATCGC GATGAGCTGT CAGAACTTAA GAAAACACTT AATGTTGAAG TGGACCAACT TCGAGTAGAA
TTTCAAGATT TGAGGGCTAC CCTTCAGCAG CAACAAGAGG ATGTTACTGC TAGCTTAAGA AACTTGGGGC TTCAGGATGC
CTCAGACGTC AAGCATGCTC CAGCACAGGA GACAAAGATT GAAGAAGTTG ACAAAGAAGA ACATGAGGTG GTAGCAGGAG
AAGATAATAA CATTGAAGTA GCTGAAAATT AA

>Vigan.02G325500.01
MANSDSSLPL STKKENVTPV TSKIAELNES RSELLGRIQS LKKDLQSWRF KLDTQVKVYR DELSELKKTL NVEVDQLRVE
FQDLRATLQQ QQEDVTASLR NLGLQDASDV KHAPAQETKI EEVDKEEHEV VAGEDNNIEV AEN*