GBrowse Details

Vigan.02G336800.01

Basic Information:
Name: Vigan.02G336800.01
Multiple alignment
Variant Information
Position: Chr02:45076048..45081992 (- strand)
Length: 5945
Functional Information:
Description: Similar to Uncharacterized protein. [I1NCR1, Glycine max]
InterPro: Conserved oligomeric Golgi complex, subunit 4 (IPR013167)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.26,1.40,3.22,1.84,4.43,4.14,5.69,3.48
Arabidopsis thaliana homolog: AT4G01400.1
Automatic updates:
Name: NM_001415107 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max conserved oligomeric Golgi complex subunit 4 (LOC100808943), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:45076048..45076356 (- strand)
Length: 309
Type: three_prime_UTR
Position: Chr02:45076357..45076986 (- strand)
Length: 630
Type: CDS
Position: Chr02:45077919..45078885 (- strand)
Length: 967
Type: CDS
Position: Chr02:45079250..45079878 (- strand)
Length: 629
Type: CDS
Position: Chr02:45079879..45081992 (- strand)
Length: 2114
Type: five_prime_UTR


>Vigan.02G336800.01
CAAAACTTAT GCTGAAAATT TGATTATATT TTCTGAAGAA TCATTTAATA TTACTTTGAA CTGCACGGCA GTGGTAAAGA
GTTGCCTCAG TGATATTTCT CATTTTGATT TTTGCTTGCT CTACAAGTGA GCATAATCCT GCACCTAATT AGTCGCTGCT
AATTTAAAGA ATTACAGATA TGTGAAAATA AACTGAAGTT TCCTATCAGG TCTGCCATTC TATTTCTTGA TCTTAAGTTG
AATACTTTTT CACTCAAAAA ATCATGTTTT GAACTATCAA ATATACAGAG ATATTGCTGA TTGGAATTTT GAATACAAGG
AATAAATCCA GATTTTGATG GACTTTTCAC AGTAGATCTA CCCCCACTTG CTGACATATT CTAGCTCTCA AGTTCTCCCA
TCAATCTCAG TTATGGATAC CAGACCAGAG CTTCCTCCCA AACAATCAAA ATTGCAACTA TCACTACGCA AAATCTGAAT
ATCCTGTCAG ATCTTATTCC TCTCTCTTTA AACGCTCTCT AATCACTAGT GTTCGACCAC AAAGCACCTG CAAGAAAGAC
CAGACCAGGT ATCAGACATT AGCTCATGAA TAAGAAGCAC AACAATGAAA AGCGGCAGAG ATAGAATGCA TATATATACC
GTTCCATTGA GAGATAGTGC AGCATTTCGT TCTCTCTCTG AAAGATAGGA GACAAACGCA TAAACCCTTT GTTTTCCTTG
TCTCGTATCT TGCAACACCC TTACACTGGT CACATTACCA AATCTACCAA AAAGCTGCCT CAGGTCTTCA GGCATGGTAA
ACTTGGAAAG ATTCCCAACA TACAACTTAT GAGGACCTTC ATAGTATATA GTTCTCATGG GTAACGAATT CATCGTGTCA
AGATTCCTCC TCCTCTTGGG ATTCATCTCA GCTGAAAATC TAACCAGCAC TTCGCGCCCA CCAACATCCT TCAGTTGTGA
AAAAGGAACC AAAAACACAT TTTCAGAACA AACGAACAGC CAGAACACAT TAACGAAATA ATGCATCATC GAGTTTCACA
CTCACGAACC GATGCATCCA ATGCCTCAAT TGCCTTTTTT GCGGAGTCAA TAGATGCCAT TGTGACATAA GCACTCCCTC
TACTCTCACC AGTCTCCTCA CTGCGGCAAA CCTGCAAAAG TGCAGTCACC CATCAACACA GTACCTTGTC ATCATTACCA
CCATTGCTGA TTCAGATCAT AACTATGAAA GGGGGAAACA TTTGTGCTGC TGAACTAGCT AGTCAATAAT GAAAACGAAG
ATGATAAATA GAGCAAAGAA GATTTCAAGC TCTGTTTTTT AAAAAAAAAA ATTGAATAAT TTAGTGAGAA GAGAAGAGAG
GGTATAGTAA AATGAATGTT AAATAAGGAA AAGGTGAAAG AAGCCATAAA ACCTGAGCAG AGAGTACGGT TCCATGAGGG
TTGAACATAT GAAGTAGATG TTGTACGTCA CAGCTTCTTG GAAGGTTGCA GATGTAGACT TCGGTTGGTC TTGGTTGCTT
GAACGTTTCT TCCTCCGCGT TTTGTCCTCC GTGAACGACC CTTCCTTTAT CCACCGTGGC CGCCGAGGCG GTGAAGGAGA
AAGTCGTAGC CTTGGAAAAG GAAACGAATG GTTTGCGGGA AGATCTGAAT TGGGTGTGGA GATGGTGGTT GAATAAGGGT
GTGGGTAAGG AGGAAGATGT GAAGGAGAGC AAGAAAATGG TATTAGGAGC CATGTTTAGC CTCAGTGTGT GCTATGCTGT
GCTGTGTTTT CTTTTACACC CAATCCATTT AACCCCAAAT ACACTTTTTT TTCTTTTCTA AAACATTACT TTTATTAAAA
TAACATTGAA AAAATTACTA ATAAATAAAG AATAGTTTAT AAATGATGAA TTTTAAAGGA AAAAATTATA AAATAAATAT
TTTTACAACA AGCATAAAGT TAAATATTTC GTGAGAAAAT AAGTTCTTAC AAAAACCATG GGTACCATAA TTAAGAAAAG
AGTGTAATAA TAATTAAGAG TTAGATAATA AACTCCCTTT GTTGTTGTAG TTACTTCAGA TCTGATCTGA AGGGGAATGT
GATTGTAGGT TGGGCAATTC ATGGTGTGAG AAAGATGGGG ACTACGCCTG AGGTCAACGG GAATAATGTA CCGGACGAAG
AAACACTCGG CGGCTCAATT CATTTCGGCA CGGCGGAGGC CGTCGAATAC GTCCGTTCGC TCACCGACGT CGGCGCCATG
ACGCGCCTCC TCCATGAGTG CATCGCTCAC CAGAGAGCCG TCGACGTCGA ACTCGACGAG CTTCTCTCGC AGCGCACTGA
CCTCGACCGT CACCTCCTCC AGCTCCAGCG CTCCTCCGAT GTCCTTGACA TCGTCAACTC CGACGCAGAC TACATGCTCT
CTAACGTGGC TTCCACCTCC GACCTCGCTG ACCAGGTCAG CAGCAAGGTC CGCGAGCTTG ACCTGGCGCA GTCGCGCGTC
CGCAACGCGC TCCTCCGCAT CGACGCCATT GTGGAGCGCG CCAACTCCCT CGAAGGCGTC CACCGTGCCC TCGAGGCAGA
GGACTATGAG TCTGCCTCCC GCTACGTCCA GACCTTCCTC CAAATTGACG CGCAGTACAA AGATTCCGGC TCCGATCAGC
TTCAGAGGGA TCGCTTGTTG GCAGCGAAGA AGCAGTTGGA GGGAATTGTA AGGAAGAAGC TCTCTGCCGC AGTGGATCAG
CGCGACCACC CCGCCATTCT CAGGTTCATT CGACTCTTCA CCCCGTTGGG TGTGGAGGAG GAGGGATTGC AGTTGTATGT
TGGGTACTTG AAGAAAGTGA TTGCAATGAG ATCAAGAATG GAGTTTGAGC AATTGGTGGA GACAATGGAT CAGCGTAATG
TCAATTTTGT TGGTTGTTTG ACCAATTTGT TCAAGGACAT TGTGTTGGCG ATTGAGGAGA ATAGTGAGAT CTTGAGTGGT
CTTTGTGGGG AGGATGGTAT TGTATATGCC ATCTGTGAGC TTCAGGAGGA GTGTGATTCT CGCGGTTCTG TGATTTTGAA
CAAGTATATG GAGTATAGGA AGTTGGCTAA GTTGTCCTCT GAGATAAATG CTCACAACAC CAATTTGCTT GCTGTTGGAG
GAGGTCCTGA GGGTCCTGAC CCACGAGAGG TTGAGTTATA TTTGGAGGAG ATTCTCTCCC TTATGCAGCT TGGTGAAGAT
TACACTGAAT TCATGATTTC AAAGATCAAA GGGCTTACTT CTGTTGACCC TGAGTTGCTT CCCCGTGCCA CCAGAGCTTT
TCGGAGTGGC AGTTTCAGCA AGGTTGCACA AGATTTAACT GGGTTTTATG TGATTTTGGA GGGATTTTTC ATGTTGGAGA
ACGTCAGGAA AGCAATAAGG ATTGATGAAC ACGTGCCTGA CAGCCTTACC ACTTCTATGG TGGATGATGT ATTTTATGTA
TTGCAGAGTT GCCTGCGGAG GGCAATATCC ACTTCCAATA TCAGTTCTGT TGTTGCCGTT TTGAGTGGTG CCAGCAGTTT
ACTCGGTAAT GAATATAATG AAGCCTTGCA GCAAAAAATA AGAGAGCCAA ACCTTGGTGC AAAGTTGTTC TTTGGTGGCG
TTGGTGTGCA AAAGACAGGG ACAGAAATTG CAACAGCTTT GAATAATATG GATGTTAGCA GTGAGTATGT TCTGAAGCTA
AAACATGAAA TTGAAGAACA GTGTGCTGAG GTGTTTCCTG CACTAGCTGA TCGAGAAAAG GTAAAATCTT GTTTGACTGA
GTTGGCAGAT AGCAGCAATG CTTTCAAGCA AGCTTTAACT GCTGGCATAG AACAACTTGT GTCAACCATT ACACCTCGAA
TAAGACCAAT ATTAGACAGC GTTGGAACAA TTAGCTATGA GCTTTCGGAG GCTGAGTATG CAAATAATGA GGTGAATGAT
CCATGGGTTC AGAGACTTCT CCATGCTGTT GAGACGAATG TGGCATGGTT GCAGCCACTT ATGACAGCTA ACAATTATGA
CACGTTTGTT CATTTGATTA TTGACTTCAT TGTGAAAAGG CTAGAAGTTA TTATGATGCA AAAAAGATTT AGTCAGCTAG
GCGGTCTTCA ACTTGACCGA GATGCTAGAG CTTTGGTAAG TCACTTCAGT GTCATGACAC AGAGAACTGT CAGAGACAAG
TTTGCACGTC TTACTCAAAT GGCAACAATT CTAAATTTAG AAAAGGTTTC TGAGATTCTA GATTTCTGGG GTGAGAACTC
TGGACCTATG ACCTGGAGAT TAACTCCAGC AGAAGTTAGG CGTGTATTGG GTCTGCGGAT TGATTTTAAA CCAGAAGCAA
TAGCTGCTGT GAAGTTGTAA TATCGGTTTA TATGGTCTCT TCACATTCTT TTCTTTTTTT TCTACTTTAA TTTTTCATCT
GATAAGTATT ACAGATTCAT TCTTACTACT TTTGGAGTTT GGTAAGTTAA CTTACAGTTT CGTTATACGA CTCACATTGT
TAGCTTCAAT GGCAAAATAA TAGGCACAGA GTATTCAGAT TTGCCGCCCG AGAGGCCAAG ATATTACTCG TATAGTGTAA
AATGGTCTTT GTTCCTGAAT ATCCACTTTC CAATTTTGAA TTTTTGAATA TTTTTCTGTA AATCAATTTG AGACATAGTT
CATGCGTGT

>Vigan.02G336800.01
ATGGGGACTA CGCCTGAGGT CAACGGGAAT AATGTACCGG ACGAAGAAAC ACTCGGCGGC TCAATTCATT TCGGCACGGC
GGAGGCCGTC GAATACGTCC GTTCGCTCAC CGACGTCGGC GCCATGACGC GCCTCCTCCA TGAGTGCATC GCTCACCAGA
GAGCCGTCGA CGTCGAACTC GACGAGCTTC TCTCGCAGCG CACTGACCTC GACCGTCACC TCCTCCAGCT CCAGCGCTCC
TCCGATGTCC TTGACATCGT CAACTCCGAC GCAGACTACA TGCTCTCTAA CGTGGCTTCC ACCTCCGACC TCGCTGACCA
GGTCAGCAGC AAGGTCCGCG AGCTTGACCT GGCGCAGTCG CGCGTCCGCA ACGCGCTCCT CCGCATCGAC GCCATTGTGG
AGCGCGCCAA CTCCCTCGAA GGCGTCCACC GTGCCCTCGA GGCAGAGGAC TATGAGTCTG CCTCCCGCTA CGTCCAGACC
TTCCTCCAAA TTGACGCGCA GTACAAAGAT TCCGGCTCCG ATCAGCTTCA GAGGGATCGC TTGTTGGCAG CGAAGAAGCA
GTTGGAGGGA ATTGTAAGGA AGAAGCTCTC TGCCGCAGTG GATCAGCGCG ACCACCCCGC CATTCTCAGG TTCATTCGAC
TCTTCACCCC GTTGGGTGTG GAGGAGGAGG GATTGCAGTT GTATGTTGGG TACTTGAAGA AAGTGATTGC AATGAGATCA
AGAATGGAGT TTGAGCAATT GGTGGAGACA ATGGATCAGC GTAATGTCAA TTTTGTTGGT TGTTTGACCA ATTTGTTCAA
GGACATTGTG TTGGCGATTG AGGAGAATAG TGAGATCTTG AGTGGTCTTT GTGGGGAGGA TGGTATTGTA TATGCCATCT
GTGAGCTTCA GGAGGAGTGT GATTCTCGCG GTTCTGTGAT TTTGAACAAG TATATGGAGT ATAGGAAGTT GGCTAAGTTG
TCCTCTGAGA TAAATGCTCA CAACACCAAT TTGCTTGCTG TTGGAGGAGG TCCTGAGGGT CCTGACCCAC GAGAGGTTGA
GTTATATTTG GAGGAGATTC TCTCCCTTAT GCAGCTTGGT GAAGATTACA CTGAATTCAT GATTTCAAAG ATCAAAGGGC
TTACTTCTGT TGACCCTGAG TTGCTTCCCC GTGCCACCAG AGCTTTTCGG AGTGGCAGTT TCAGCAAGGT TGCACAAGAT
TTAACTGGGT TTTATGTGAT TTTGGAGGGA TTTTTCATGT TGGAGAACGT CAGGAAAGCA ATAAGGATTG ATGAACACGT
GCCTGACAGC CTTACCACTT CTATGGTGGA TGATGTATTT TATGTATTGC AGAGTTGCCT GCGGAGGGCA ATATCCACTT
CCAATATCAG TTCTGTTGTT GCCGTTTTGA GTGGTGCCAG CAGTTTACTC GGTAATGAAT ATAATGAAGC CTTGCAGCAA
AAAATAAGAG AGCCAAACCT TGGTGCAAAG TTGTTCTTTG GTGGCGTTGG TGTGCAAAAG ACAGGGACAG AAATTGCAAC
AGCTTTGAAT AATATGGATG TTAGCAGTGA GTATGTTCTG AAGCTAAAAC ATGAAATTGA AGAACAGTGT GCTGAGGTGT
TTCCTGCACT AGCTGATCGA GAAAAGGTAA AATCTTGTTT GACTGAGTTG GCAGATAGCA GCAATGCTTT CAAGCAAGCT
TTAACTGCTG GCATAGAACA ACTTGTGTCA ACCATTACAC CTCGAATAAG ACCAATATTA GACAGCGTTG GAACAATTAG
CTATGAGCTT TCGGAGGCTG AGTATGCAAA TAATGAGGTG AATGATCCAT GGGTTCAGAG ACTTCTCCAT GCTGTTGAGA
CGAATGTGGC ATGGTTGCAG CCACTTATGA CAGCTAACAA TTATGACACG TTTGTTCATT TGATTATTGA CTTCATTGTG
AAAAGGCTAG AAGTTATTAT GATGCAAAAA AGATTTAGTC AGCTAGGCGG TCTTCAACTT GACCGAGATG CTAGAGCTTT
GGTAAGTCAC TTCAGTGTCA TGACACAGAG AACTGTCAGA GACAAGTTTG CACGTCTTAC TCAAATGGCA ACAATTCTAA
ATTTAGAAAA GGTTTCTGAG ATTCTAGATT TCTGGGGTGA GAACTCTGGA CCTATGACCT GGAGATTAAC TCCAGCAGAA
GTTAGGCGTG TATTGGGTCT GCGGATTGAT TTTAAACCAG AAGCAATAGC TGCTGTGAAG TTGTAA

>Vigan.02G336800.01
MGTTPEVNGN NVPDEETLGG SIHFGTAEAV EYVRSLTDVG AMTRLLHECI AHQRAVDVEL DELLSQRTDL DRHLLQLQRS
SDVLDIVNSD ADYMLSNVAS TSDLADQVSS KVRELDLAQS RVRNALLRID AIVERANSLE GVHRALEAED YESASRYVQT
FLQIDAQYKD SGSDQLQRDR LLAAKKQLEG IVRKKLSAAV DQRDHPAILR FIRLFTPLGV EEEGLQLYVG YLKKVIAMRS
RMEFEQLVET MDQRNVNFVG CLTNLFKDIV LAIEENSEIL SGLCGEDGIV YAICELQEEC DSRGSVILNK YMEYRKLAKL
SSEINAHNTN LLAVGGGPEG PDPREVELYL EEILSLMQLG EDYTEFMISK IKGLTSVDPE LLPRATRAFR SGSFSKVAQD
LTGFYVILEG FFMLENVRKA IRIDEHVPDS LTTSMVDDVF YVLQSCLRRA ISTSNISSVV AVLSGASSLL GNEYNEALQQ
KIREPNLGAK LFFGGVGVQK TGTEIATALN NMDVSSEYVL KLKHEIEEQC AEVFPALADR EKVKSCLTEL ADSSNAFKQA
LTAGIEQLVS TITPRIRPIL DSVGTISYEL SEAEYANNEV NDPWVQRLLH AVETNVAWLQ PLMTANNYDT FVHLIIDFIV
KRLEVIMMQK RFSQLGGLQL DRDARALVSH FSVMTQRTVR DKFARLTQMA TILNLEKVSE ILDFWGENSG PMTWRLTPAE
VRRVLGLRID FKPEAIAAVK L*