GBrowse Details

Vigan.02G341700.01

Basic Information:
Name: Vigan.02G341700.01
Multiple alignment
Variant Information
Position: Chr02:45370591..45374998 (+ strand)
Length: 4408
Functional Information:
Description: Similar to Potassium transporter. [V7AZI5, Phaseolus vulgaris]
GO: Biological Process: potassium ion transmembrane transport (GO:0071805)
Cellular Component: membrane (GO:0016020)
Molecular Function: potassium ion transmembrane transporter activity (GO:0015079)
InterPro: K+ potassium transporter (IPR003855)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.14,0.04,0.05,0.05,12.87,0.88,101.46,0.03
Arabidopsis thaliana homolog: AT1G31120.1, AT1G60160.1, AT1G70300.1, AT2G30070.1, AT2G35060.2, AT2G40540.1, AT3G02050.1, AT4G13420.1, AT4G19960.1, AT4G33530.1, AT5G09400.1, AT5G14880.1
Automatic updates:
Name: NM_001287448 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max potassium transporter 5-like (HAK), mRNA.
PubMed ID: 24113821 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr02:45370591..45370626 (+ strand)
Length: 36
Type: five_prime_UTR
Position: Chr02:45370627..45370806 (+ strand)
Length: 180
Type: CDS
Position: Chr02:45370882..45371104 (+ strand)
Length: 223
Type: CDS
Position: Chr02:45372257..45372505 (+ strand)
Length: 249
Type: CDS
Position: Chr02:45372611..45372652 (+ strand)
Length: 42
Type: CDS
Position: Chr02:45372736..45372996 (+ strand)
Length: 261
Type: CDS
Position: Chr02:45373075..45373127 (+ strand)
Length: 53
Type: CDS
Position: Chr02:45373236..45373350 (+ strand)
Length: 115
Type: CDS
Position: Chr02:45373486..45373740 (+ strand)
Length: 255
Type: CDS
Position: Chr02:45373845..45374881 (+ strand)
Length: 1037
Type: CDS
Position: Chr02:45374882..45374998 (+ strand)
Length: 117
Type: three_prime_UTR


>Vigan.02G341700.01
GAAGAAGAAA AAAAAATAAG TGCGTGGAGA GTGAAGATGT CTGGAGCAGA AGGAGAAGAT GGAAGAAAGA GCACGGAGGA
AACTGGTGTA ACAGCAGAGG CAGAGAAGAA CCTTAAGCTG AAAGAGCGAA AGGTATCATG GGCAAAACTA AGACGCATAG
ATTCTCTGAA TTTAGAAGCT GGAAGAGTTT CCATGGTTGC ACACAATCCT CACAAGATGG GATGGAGAAT TACTCTCAGC
TTAGCATTTC AAAGCATAGG AGTTGTGTAT GGTGATATTG GGACATCACC CCTTTATGTA TATGCCAGTA CCTTCACCGA
TGGAATCAAG CATAATGATG ATATTTTGGG TGTTTTGTCT CTTATCATCT ACACCATCCT TCTCATACCT ATGATCAAAT
ATGTCTTCAT CGTACTGTGG GCTAATGACA ATGGCAACGG TGGGGCCTTT GCACTGTATT CATTAATATG TAGGCACATA
AAAATGAGTT TGATTCCAAA TGAACAACCA GAGGATAGGG AGCTTTCTAA TTACAAACTA GAAACCCCAT CGACTCAGAT
GAAACGGGCT CACAAACTAA AACAGAAACT CGAGGGCAGT AATGTTGCAC GAGTTGTGCT TGTGCTTCTT GCAATAATGG
GAACTTCCAT GGTTATAGGA GACGGCATTC TTACTCCATC AATATCAGTA CTTTCAGCTG TAAGTGGGAT CAGTAAATCA
TTAGGTCAAG ATGCTGTTGT GGGAATCACA ATAGCAATTT TGATAGTCCT ATTCTCTGTT CAACGTTTTG GTACTGATAA
AGTGGGATTC TCATTTGCTC CAATTATTTT GGTGTGGTTT TTGTTCATCG CTGGAATTGG TTTTTACAAC TTATTCAAAT
ATGACATTGG AGTATTACGT GCCTTTTATC CAAAATATAT ATATGATTAC TTCAAACGTA ATGGAAAGAA TGGATGGTTA
TCACTTGGTG GAGTTTTTTT ATGCATAACA GGATCTGAGG CTATGTTTGC TGACTTGGGT CACTTTAATG TACGAGCCAT
TCAAATAAGC TTTTCTTTCA TTACATGTCC ATCAATCGTG ATTGCATACA TTGGGCAAGC AGCATATTTG AGGAAGTTTC
CTGACAATGT AGCTAATACT TTCTATGATT GCATTCCAGG TCCCTTATAT TGGCCAACTT TTGTTGTGGC TGTTGCTGCT
GCCATTATAG CTAGCCAAGC AATGATTACG GGAGCATTCT CCATTATATC CCAAGCCCTA AGTCTAGGTT GTTTTCCAAG
AGTTAGGGTG GTGCACACTT CCATCAAACA TCATGGTCAG GTGTATATTC CAGAAATAAA CTACATGTTC ATGATCGCAT
GTATCGTGGT GTGTGCTGCC TTCAAGACCA CAGAAAAGAT TAGTCATGCA TATGGGATTG CGGTTATTGG TGACATGATG
ATTTCAACAA CTCTGGTTTC GCTAATAATG CTTGTTTTAT GGAAAAAGAG TCTATGGCGT GTGACATTGT TCTTCTTTGG
ATTCGGTTTC ATTGAATTAG TTTATTTAAC ATCTCAACTG ACCAAGTTTA CAGGAGGAGG GTATTTTCCA ATTGTATCAG
CTATGTTCTT GACGTCGATT ATGGGAATTT GGCACTATGT GCACAAAGAA AGATACATGT TTGAGTTAAA AAATAAGGTA
TCAAGTGCAT ATCTGAATGA AGTGGCGAAC AATCCAGATG TAAGGCGAGT ACCAGGAATT GGACTTTTGT ATTCTGAGTT
GGTGCAAGGC ATTCCTCCTA TATTCCCACA CCTTATAGCT AACATTCCAT CTGTCCACTC AATTCTTGTG TTTGTGTCTA
TTAAAGCAAT TCCCGTGAGT AGTGTTGCAT CGGAGGAGAG GTTCTTGTTT CGACAGGTGG AGCCAAGAGA GTACAGAGTT
TTTCGTTGTG TTGTGAGGCA TGGTTACAAT GATGTTCTTG AAGATCCTGC AAAGTTTGAG TCAGAATTGA TACAAAATCT
AAAGGCGTTC ATTCAGGAGG AGAACTACCA TATGGTGGAA GTGGAGGGAA TTGGAAATGC AATCGAACAA ACAACGGTGG
TTGAAAGCAG TGATAAGAGG GAAGCACATC GTTCCTCTAG TAGAATAATC CCCAATCAAC CAGCATCAGC CTCATCTGAT
TCCATTCGAT CATTGGGGGG GAGTGACACC AAGTCATATG CTAACTTCCT TGCCCCACCC ATCCATGGAG CTGAAGAGGA
ACTCAAATTC ATAGAAAAAG CATCAGAGAA AGGCGTGGTG TACATGCTGG CAGAAGCAGA GGTTGTGGCT CACCCAAACT
CCTCCATCAT CAATAAGATC ATTGTGAATT ATGTGTACAG TTTCTTCAGA AAGAACTTTA GACAAGGTCA GAGTTCCATG
GCAATCCCAC GGAATAGACT TCTCAAGATT GGAATGACAT ACGAAATATG ACATATCTCT TCCACCCATC CCTAAGCACA
ATAAATATAA ACTTCTCTTT AATTTTGATG TTACTAAAGC ATGTTACTTT AATTACCTAT AATCAACAAA AGAACCATTT
GATGTCCA

>Vigan.02G341700.01
ATGTCTGGAG CAGAAGGAGA AGATGGAAGA AAGAGCACGG AGGAAACTGG TGTAACAGCA GAGGCAGAGA AGAACCTTAA
GCTGAAAGAG CGAAAGGTAT CATGGGCAAA ACTAAGACGC ATAGATTCTC TGAATTTAGA AGCTGGAAGA GTTTCCATGG
TTGCACACAA TCCTCACAAG ATGGGATGGA GAATTACTCT CAGCTTAGCA TTTCAAAGCA TAGGAGTTGT GTATGGTGAT
ATTGGGACAT CACCCCTTTA TGTATATGCC AGTACCTTCA CCGATGGAAT CAAGCATAAT GATGATATTT TGGGTGTTTT
GTCTCTTATC ATCTACACCA TCCTTCTCAT ACCTATGATC AAATATGTCT TCATCGTACT GTGGGCTAAT GACAATGGCA
ACGGTGGGGC CTTTGCACTG TATTCATTAA TATGTAGGCA CATAAAAATG AGTTTGATTC CAAATGAACA ACCAGAGGAT
AGGGAGCTTT CTAATTACAA ACTAGAAACC CCATCGACTC AGATGAAACG GGCTCACAAA CTAAAACAGA AACTCGAGGG
CAGTAATGTT GCACGAGTTG TGCTTGTGCT TCTTGCAATA ATGGGAACTT CCATGGTTAT AGGAGACGGC ATTCTTACTC
CATCAATATC AGTACTTTCA GCTGTAAGTG GGATCAGTAA ATCATTAGGT CAAGATGCTG TTGTGGGAAT CACAATAGCA
ATTTTGATAG TCCTATTCTC TGTTCAACGT TTTGGTACTG ATAAAGTGGG ATTCTCATTT GCTCCAATTA TTTTGGTGTG
GTTTTTGTTC ATCGCTGGAA TTGGTTTTTA CAACTTATTC AAATATGACA TTGGAGTATT ACGTGCCTTT TATCCAAAAT
ATATATATGA TTACTTCAAA CGTAATGGAA AGAATGGATG GTTATCACTT GGTGGAGTTT TTTTATGCAT AACAGGATCT
GAGGCTATGT TTGCTGACTT GGGTCACTTT AATGTACGAG CCATTCAAAT AAGCTTTTCT TTCATTACAT GTCCATCAAT
CGTGATTGCA TACATTGGGC AAGCAGCATA TTTGAGGAAG TTTCCTGACA ATGTAGCTAA TACTTTCTAT GATTGCATTC
CAGGTCCCTT ATATTGGCCA ACTTTTGTTG TGGCTGTTGC TGCTGCCATT ATAGCTAGCC AAGCAATGAT TACGGGAGCA
TTCTCCATTA TATCCCAAGC CCTAAGTCTA GGTTGTTTTC CAAGAGTTAG GGTGGTGCAC ACTTCCATCA AACATCATGG
TCAGGTGTAT ATTCCAGAAA TAAACTACAT GTTCATGATC GCATGTATCG TGGTGTGTGC TGCCTTCAAG ACCACAGAAA
AGATTAGTCA TGCATATGGG ATTGCGGTTA TTGGTGACAT GATGATTTCA ACAACTCTGG TTTCGCTAAT AATGCTTGTT
TTATGGAAAA AGAGTCTATG GCGTGTGACA TTGTTCTTCT TTGGATTCGG TTTCATTGAA TTAGTTTATT TAACATCTCA
ACTGACCAAG TTTACAGGAG GAGGGTATTT TCCAATTGTA TCAGCTATGT TCTTGACGTC GATTATGGGA ATTTGGCACT
ATGTGCACAA AGAAAGATAC ATGTTTGAGT TAAAAAATAA GGTATCAAGT GCATATCTGA ATGAAGTGGC GAACAATCCA
GATGTAAGGC GAGTACCAGG AATTGGACTT TTGTATTCTG AGTTGGTGCA AGGCATTCCT CCTATATTCC CACACCTTAT
AGCTAACATT CCATCTGTCC ACTCAATTCT TGTGTTTGTG TCTATTAAAG CAATTCCCGT GAGTAGTGTT GCATCGGAGG
AGAGGTTCTT GTTTCGACAG GTGGAGCCAA GAGAGTACAG AGTTTTTCGT TGTGTTGTGA GGCATGGTTA CAATGATGTT
CTTGAAGATC CTGCAAAGTT TGAGTCAGAA TTGATACAAA ATCTAAAGGC GTTCATTCAG GAGGAGAACT ACCATATGGT
GGAAGTGGAG GGAATTGGAA ATGCAATCGA ACAAACAACG GTGGTTGAAA GCAGTGATAA GAGGGAAGCA CATCGTTCCT
CTAGTAGAAT AATCCCCAAT CAACCAGCAT CAGCCTCATC TGATTCCATT CGATCATTGG GGGGGAGTGA CACCAAGTCA
TATGCTAACT TCCTTGCCCC ACCCATCCAT GGAGCTGAAG AGGAACTCAA ATTCATAGAA AAAGCATCAG AGAAAGGCGT
GGTGTACATG CTGGCAGAAG CAGAGGTTGT GGCTCACCCA AACTCCTCCA TCATCAATAA GATCATTGTG AATTATGTGT
ACAGTTTCTT CAGAAAGAAC TTTAGACAAG GTCAGAGTTC CATGGCAATC CCACGGAATA GACTTCTCAA GATTGGAATG
ACATACGAAA TATGA

>Vigan.02G341700.01
MSGAEGEDGR KSTEETGVTA EAEKNLKLKE RKVSWAKLRR IDSLNLEAGR VSMVAHNPHK MGWRITLSLA FQSIGVVYGD
IGTSPLYVYA STFTDGIKHN DDILGVLSLI IYTILLIPMI KYVFIVLWAN DNGNGGAFAL YSLICRHIKM SLIPNEQPED
RELSNYKLET PSTQMKRAHK LKQKLEGSNV ARVVLVLLAI MGTSMVIGDG ILTPSISVLS AVSGISKSLG QDAVVGITIA
ILIVLFSVQR FGTDKVGFSF APIILVWFLF IAGIGFYNLF KYDIGVLRAF YPKYIYDYFK RNGKNGWLSL GGVFLCITGS
EAMFADLGHF NVRAIQISFS FITCPSIVIA YIGQAAYLRK FPDNVANTFY DCIPGPLYWP TFVVAVAAAI IASQAMITGA
FSIISQALSL GCFPRVRVVH TSIKHHGQVY IPEINYMFMI ACIVVCAAFK TTEKISHAYG IAVIGDMMIS TTLVSLIMLV
LWKKSLWRVT LFFFGFGFIE LVYLTSQLTK FTGGGYFPIV SAMFLTSIMG IWHYVHKERY MFELKNKVSS AYLNEVANNP
DVRRVPGIGL LYSELVQGIP PIFPHLIANI PSVHSILVFV SIKAIPVSSV ASEERFLFRQ VEPREYRVFR CVVRHGYNDV
LEDPAKFESE LIQNLKAFIQ EENYHMVEVE GIGNAIEQTT VVESSDKREA HRSSSRIIPN QPASASSDSI RSLGGSDTKS
YANFLAPPIH GAEEELKFIE KASEKGVVYM LAEAEVVAHP NSSIINKIIV NYVYSFFRKN FRQGQSSMAI PRNRLLKIGM
TYEI*