GBrowse Details

Vigan.03G003100.01

Basic Information:
Name: Vigan.03G003100.01
Multiple alignment
Variant Information
Position: Chr03:317423..322699 (+ strand)
Length: 5277
Functional Information:
Description: Similar to BZIP transcription factor bZIP107. [G7KFE1, Medicago truncatula]
InterPro: Domain of unknown function DUF632 (IPR006867)
Domain of unknown function DUF630 (IPR006868)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:25.02,29.32,14.24,13.10,11.63,8.20,9.65,12.75
Arabidopsis thaliana homolog: AT2G17110.1, AT4G35240.1
Automatic updates:
Name: DQ787084 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max bZIP transcription factor bZIP107 (bZIP107) mRNA, partial cds.
PubMed ID: 18365246 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr03:317423..317639 (+ strand)
Length: 217
Type: five_prime_UTR
Position: Chr03:317640..318804 (+ strand)
Length: 1165
Type: CDS
Position: Chr03:318886..319076 (+ strand)
Length: 191
Type: CDS
Position: Chr03:319343..319566 (+ strand)
Length: 224
Type: CDS
Position: Chr03:321328..322063 (+ strand)
Length: 736
Type: CDS
Position: Chr03:322064..322699 (+ strand)
Length: 636
Type: three_prime_UTR


>Vigan.03G003100.01
GGTGAATAGA GAGAAACTGA AAAGAGAGAA GAAATATGAT AGAAAAGGAC GAGAAAGTCC TTGCTGGCAA AAGATTCCCT
TCATTCATTA ACTCATTGTT TTGTTTTGGT GGGGCACTCA CTGCTACTGC TCTTCTTCCT CTTCCTATCT TCTACCTACG
TTCCGCTCCG ATTATACTTC CTTTATCTCC GATTACCAAA CCCTAAAAGG AACCACCATG GGATGTGCCA GCTCCAAGCT
GGACGATCTC CCGGCGGTGG CGCTCTGCCG GGAACGCTGT GTTTTTCTCG ACGAAGCAAT CCACCAGCGC TACGCACTCG
CCGCGGCCCA CATCGCTTAC ATAAACTCCC TCAAGGCAAT TGGTCACTCC CTCCACTCCT TCGTCCACCA CGACACCCAG
AGGCCGGCGC CGCCGTCTCC TTCTTCCTCC CCCTCTCCCT CTCCCTCTCC TCCCCACAAA ACCCACCAGC TTTCCAAGCA
CGCCTCTCCC GCCCACTCCG ATTCTGCCGG CTCCCACCTC CACTTCCACT CCGACTCCGA TGATCTCTCT CTCCACCATT
CCCCCCAAGC CTCCCCCATT CGTCTCCCTG CTTTCTACAA CAATTCCCAA CCACCGGATC ACCACCTTCA CATCAATTAC
ATGAAGAACA AGGCCGCCCC TTCAATTGTC TACGAGCAGA GGCCTCTCAG TCCCGAAACC GGCTACCTCG GAGAGTCTTC
TTCCTCCTTT TACCCTTACG CTTCCTCCTC CTACCCCTCC TACCCGTACG CCTATGATCC ATATTCTGCC CCTCCCTACC
CCGGATCTTC CCAGCCCCAA CCCCAACCCC AGCGCCATCC CAACTCCAAA CCCCCTCCCC CTCCCCCCTC CCCTCCCCGG
GCCTCCACCT GGGACTTCCT CAACTTCTTC GATAACACTT ACGACACCCA AGCTCATTAC ACCGCCACTC CCAGCCGTGA
CTCCAGGGAG CTCCGGGAGG AGGAGGGCAT CCCCGATTTG GAAGACGAGG ATTACCACCA CCACGAAGTC GTCAAGCAAG
TTCACGGGGA TCAGAAGCTC GTCGAACCTA AGCCCCAACC CCCCAACCCC CACCACAACC ACCTCCACGA GGAGGAGGAT
GAAGAAGAGG AAGATGAAGA TGAGGTGGAG TATGAAGTTC ACGTCGTCGA TAAGAAAGTG GTTGATGCCG ATAATGATGG
TAACAACAAA CCCAAGGACC ACGCCGCATT CCGGAGCCGC CGACCTGGCT CCCGGAATCC CCTCGAGGTC GCTAAAGAGA
TTCAGGATCT CTTTCAGAGG GCTTCTGATT CCGGTGCCCT AATCGCTAAG ATCCTCGAGG TGGGCAAGCT TCCCCACAAT
CGAAAGCACG CCGCCTATCA AGCTTCTTCC AAGATGTTAC AAGTTGTTTC TCCCTCGCTG TCTCTTATTT CCTCCCAACC
ATCTACTTCT AAAGATGCCG AATCCGCCTC TAACATGGAT GTTGATGCTG ATCTAATAAC TGGAGCACGC AATCTTTCCT
CGACACTGCA TAAGCTCCTA CTTTGGGAGA AGAAACTCTA TAATGAAGTT AAGGCTGAGG AAAAGATGCG GGTAATCCAT
GATAGGAAGC TTCGCAAGCT GAAGCGTATG GATGATAGGG GAGCTGATTT TCATAAAGTT GGTGCGACTC GGACTTTGAT
TAGGAGTCTG TCCACAAAAA TAAGAATGGC AATTCAGGTT GTGGATAAGA TTTCTATGAC AATAAATAAG ATAAGAGATG
AAGAACTGTG GCCACAGCTG AAGGAATTGA TCCAAGGGTT GACCAGAATG TGGAAATCCA TGCTTGAATG CCATCATAAT
CAGTGTGAAG CTATTAGAGA AGCCAGAATA CTGGGTTCCG TTGGATCCAG GATAAAGAGT GGTGGTGATA GTCATCTTCA
AGCGACGAAG CAACTTGAAC AAGAGCTCAT CAATTGGACT TTCCAATTTT CTGGCTGGAT AAGTGCCCAG AAAGGTTATG
TTAGAGCATT GAATAATTGG CTGCTGAAAT GTCTCCTGTA CGAACCAGAA GAAACACCTG ATGGCATAGT CCCCTTTTCC
CCTGGTAGGA TTGGGGCTCC GCAAATATTT GTAATATGCA ATCAGTGGTC CCAAGCTTTG GATAGAATAT CTGAGAAGGA
AGTTGTTGAT TCCATGCATG TATTTACGAT GAGTGTGCTT CAGATATGGG AACAAGATAA GCTAGAAATG CATAGGCAGA
TGAACCAGAA CAAGGATCTT GAGAGGAAGG TTAGAAACAT AGATAGAGAT GACCAGAAGT TGCAGAAGCA AATTCAAGCG
TTAGAGCGAA AGGTGCTTCT GCTATCTGGG GAAGGTAAAG GTCTCTCAGT TTCTGAGAAC ATCATTTATC AGAGTGACAA
AAGCAGTAGT CTACAGGCTA GTTTGCAGCG CATTTTTGAG GCCATGGAGA GATTTACCGA CGAATCTGTG AGAGCTTATG
AGGAATTATT ACAACGGAGT GAAGAAGAAA GTGCAGCCCG AAACCGCGAA TAGTTGGAAT CATATCTTTT TGCCGTTTGC
CAAGAATAGA GACATGCTGG TCTCCTTCTA CTAACTCTTC TTTACACAGA GCCTTGGGAA GAGGGATTGG GCTTGACTTC
TCACTATGAT GCTGAGAGCT GCTTTGGTGC TTTAATGCTG GGATACAACA GAAAGTGAAA TTTGAGGTGC GTGGCGCAGA
GTTGCGTTTT TTTGGTACTC GGTGCTGTAA GTCTACGGGT GAAGTTAGCC ATACAAGTTT GAGCTACCAA AAATCAGGGG
AGCCCACAGA TTTTAACGTC TAAAATTGAA TAGTCTTTCT TTCTACATTA GAAAATAGCA CAAGTATATA TGGTTAGATG
AAGGAGGGAC TTTCAGGTAT ATAATATAAC AACCCCTGCA AGTCATATGA ATGATATAGA GAGGTGCTCA AAGTGAACAA
GCTGTACAAT AGGGGAATTT TTACTCATAC GCAATTGGAA CAAAAGCCTC GTTCGCGTGA TGAACTTAGC TACCTCTCTG
TCAGCTGGAG TGACGCATGT CACTGAATGC ATATGGGTGT TTATTGGTTC CTGTATAAAA TTATGTTCAT TTCGTAAAAC
TATTCATATT CAAGTTAAAT TATTGTACAG ATTACCTATT AGCAGGCTT

>Vigan.03G003100.01
ATGGGATGTG CCAGCTCCAA GCTGGACGAT CTCCCGGCGG TGGCGCTCTG CCGGGAACGC TGTGTTTTTC TCGACGAAGC
AATCCACCAG CGCTACGCAC TCGCCGCGGC CCACATCGCT TACATAAACT CCCTCAAGGC AATTGGTCAC TCCCTCCACT
CCTTCGTCCA CCACGACACC CAGAGGCCGG CGCCGCCGTC TCCTTCTTCC TCCCCCTCTC CCTCTCCCTC TCCTCCCCAC
AAAACCCACC AGCTTTCCAA GCACGCCTCT CCCGCCCACT CCGATTCTGC CGGCTCCCAC CTCCACTTCC ACTCCGACTC
CGATGATCTC TCTCTCCACC ATTCCCCCCA AGCCTCCCCC ATTCGTCTCC CTGCTTTCTA CAACAATTCC CAACCACCGG
ATCACCACCT TCACATCAAT TACATGAAGA ACAAGGCCGC CCCTTCAATT GTCTACGAGC AGAGGCCTCT CAGTCCCGAA
ACCGGCTACC TCGGAGAGTC TTCTTCCTCC TTTTACCCTT ACGCTTCCTC CTCCTACCCC TCCTACCCGT ACGCCTATGA
TCCATATTCT GCCCCTCCCT ACCCCGGATC TTCCCAGCCC CAACCCCAAC CCCAGCGCCA TCCCAACTCC AAACCCCCTC
CCCCTCCCCC CTCCCCTCCC CGGGCCTCCA CCTGGGACTT CCTCAACTTC TTCGATAACA CTTACGACAC CCAAGCTCAT
TACACCGCCA CTCCCAGCCG TGACTCCAGG GAGCTCCGGG AGGAGGAGGG CATCCCCGAT TTGGAAGACG AGGATTACCA
CCACCACGAA GTCGTCAAGC AAGTTCACGG GGATCAGAAG CTCGTCGAAC CTAAGCCCCA ACCCCCCAAC CCCCACCACA
ACCACCTCCA CGAGGAGGAG GATGAAGAAG AGGAAGATGA AGATGAGGTG GAGTATGAAG TTCACGTCGT CGATAAGAAA
GTGGTTGATG CCGATAATGA TGGTAACAAC AAACCCAAGG ACCACGCCGC ATTCCGGAGC CGCCGACCTG GCTCCCGGAA
TCCCCTCGAG GTCGCTAAAG AGATTCAGGA TCTCTTTCAG AGGGCTTCTG ATTCCGGTGC CCTAATCGCT AAGATCCTCG
AGGTGGGCAA GCTTCCCCAC AATCGAAAGC ACGCCGCCTA TCAAGCTTCT TCCAAGATGT TACAAGTTGT TTCTCCCTCG
CTGTCTCTTA TTTCCTCCCA ACCATCTACT TCTAAAGATG CCGAATCCGC CTCTAACATG GATGTTGATG CTGATCTAAT
AACTGGAGCA CGCAATCTTT CCTCGACACT GCATAAGCTC CTACTTTGGG AGAAGAAACT CTATAATGAA GTTAAGGCTG
AGGAAAAGAT GCGGGTAATC CATGATAGGA AGCTTCGCAA GCTGAAGCGT ATGGATGATA GGGGAGCTGA TTTTCATAAA
GTTGGTGCGA CTCGGACTTT GATTAGGAGT CTGTCCACAA AAATAAGAAT GGCAATTCAG GTTGTGGATA AGATTTCTAT
GACAATAAAT AAGATAAGAG ATGAAGAACT GTGGCCACAG CTGAAGGAAT TGATCCAAGG GTTGACCAGA ATGTGGAAAT
CCATGCTTGA ATGCCATCAT AATCAGTGTG AAGCTATTAG AGAAGCCAGA ATACTGGGTT CCGTTGGATC CAGGATAAAG
AGTGGTGGTG ATAGTCATCT TCAAGCGACG AAGCAACTTG AACAAGAGCT CATCAATTGG ACTTTCCAAT TTTCTGGCTG
GATAAGTGCC CAGAAAGGTT ATGTTAGAGC ATTGAATAAT TGGCTGCTGA AATGTCTCCT GTACGAACCA GAAGAAACAC
CTGATGGCAT AGTCCCCTTT TCCCCTGGTA GGATTGGGGC TCCGCAAATA TTTGTAATAT GCAATCAGTG GTCCCAAGCT
TTGGATAGAA TATCTGAGAA GGAAGTTGTT GATTCCATGC ATGTATTTAC GATGAGTGTG CTTCAGATAT GGGAACAAGA
TAAGCTAGAA ATGCATAGGC AGATGAACCA GAACAAGGAT CTTGAGAGGA AGGTTAGAAA CATAGATAGA GATGACCAGA
AGTTGCAGAA GCAAATTCAA GCGTTAGAGC GAAAGGTGCT TCTGCTATCT GGGGAAGGTA AAGGTCTCTC AGTTTCTGAG
AACATCATTT ATCAGAGTGA CAAAAGCAGT AGTCTACAGG CTAGTTTGCA GCGCATTTTT GAGGCCATGG AGAGATTTAC
CGACGAATCT GTGAGAGCTT ATGAGGAATT ATTACAACGG AGTGAAGAAG AAAGTGCAGC CCGAAACCGC GAATAG

>Vigan.03G003100.01
MGCASSKLDD LPAVALCRER CVFLDEAIHQ RYALAAAHIA YINSLKAIGH SLHSFVHHDT QRPAPPSPSS SPSPSPSPPH
KTHQLSKHAS PAHSDSAGSH LHFHSDSDDL SLHHSPQASP IRLPAFYNNS QPPDHHLHIN YMKNKAAPSI VYEQRPLSPE
TGYLGESSSS FYPYASSSYP SYPYAYDPYS APPYPGSSQP QPQPQRHPNS KPPPPPPSPP RASTWDFLNF FDNTYDTQAH
YTATPSRDSR ELREEEGIPD LEDEDYHHHE VVKQVHGDQK LVEPKPQPPN PHHNHLHEEE DEEEEDEDEV EYEVHVVDKK
VVDADNDGNN KPKDHAAFRS RRPGSRNPLE VAKEIQDLFQ RASDSGALIA KILEVGKLPH NRKHAAYQAS SKMLQVVSPS
LSLISSQPST SKDAESASNM DVDADLITGA RNLSSTLHKL LLWEKKLYNE VKAEEKMRVI HDRKLRKLKR MDDRGADFHK
VGATRTLIRS LSTKIRMAIQ VVDKISMTIN KIRDEELWPQ LKELIQGLTR MWKSMLECHH NQCEAIREAR ILGSVGSRIK
SGGDSHLQAT KQLEQELINW TFQFSGWISA QKGYVRALNN WLLKCLLYEP EETPDGIVPF SPGRIGAPQI FVICNQWSQA
LDRISEKEVV DSMHVFTMSV LQIWEQDKLE MHRQMNQNKD LERKVRNIDR DDQKLQKQIQ ALERKVLLLS GEGKGLSVSE
NIIYQSDKSS SLQASLQRIF EAMERFTDES VRAYEELLQR SEEESAARNR E*