GBrowse Details

Vigan.03G022600.01

Basic Information:
Name: Vigan.03G022600.01
Multiple alignment
Variant Information
Position: Chr03:1666016..1671812 (- strand)
Length: 5797
Functional Information:
Description: Similar to Uncharacterized protein. [I1JJG7, Glycine max]
GO: Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700)
Molecular Function: sequence-specific DNA binding (GO:0043565)
InterPro: DNA-binding WRKY (IPR003657)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.31,5.73,9.99,10.50,6.85,4.52,7.34,10.90
Arabidopsis thaliana homolog: AT4G26640.2
Structure :
Position: Chr03:1666016..1666290 (- strand)
Length: 275
Type: three_prime_UTR
Position: Chr03:1666291..1666765 (- strand)
Length: 475
Type: CDS
Position: Chr03:1668188..1668346 (- strand)
Length: 159
Type: CDS
Position: Chr03:1668433..1668598 (- strand)
Length: 166
Type: CDS
Position: Chr03:1668696..1669248 (- strand)
Length: 553
Type: CDS
Position: Chr03:1669613..1669780 (- strand)
Length: 168
Type: CDS
Position: Chr03:1671298..1671516 (- strand)
Length: 219
Type: CDS
Position: Chr03:1671517..1671812 (- strand)
Length: 296
Type: five_prime_UTR


>Vigan.03G022600.01
TGTGAGTTTA GTTACAGAGA AGTAACAAAA AAAAAAGTTG AGAAAGAAGG GTTTAAAATG ACAGAGAAGA GAAGAGAGTC
ACAGACATGT GAGTGAGTTG TTTGTGAGAG AAAGAGAGAT CCAACATTGT AAGTCAACTG AGTCCTGCTC TTACAGCATC
TCTGACACAA CACAACCTTC AAACACAAAA CACAAACACA ACACCCACAA AACAAAAATT GCATCTTGAA ATGACCCTTT
TGCCCTTCGC TCCCTCCCTA CTTCTGCTCT GACTCTCATC AACGCCACCG CTCACAATGG ACGCCTCCGC CGAGCCCAGC
CCGAGTTCGG AGCTACGCCT CAACGGGGCA TCCGAGGATC CAAATCGAGG TGGGTCGGGT CAGAATTCGA CGGCGAGGTA
CAAGCTGATT GCGCCGGCGA AGCTTCCGAT CTCGAGGTCG CCGTGCATCA CGATTCCTCC AGGACTGAGT CCGACATCGT
TTCTGGAATC ACCGGTTCTT CTCTCTAACA TGAAGGTGGA GTCTTCACCA ACTACAGGGT CCCTCCGCAA GCTTCAACAA
ACAGTACATG GTTCTAAGGC CTCTGCTACA TTTGCAGTAA CCACTGCATG CTTCAATACC AATACTGTTG ATGACAGGAA
ATCAAGCTTC TTTGAGTTTA AACCACTCAA CAGGTTGAAT ATGGTTCCTG CAGACTTCAA TAACCATGTT ATCAAACAAT
CAACTCAAGC AGAAGGTCTA GGAAAAGCAC AATCATTTGT TTCCTCACCA TTAGTTGAAA GTGAGATAGC AGTTCCTGCT
AACGAATTAA GTCTATCATC ACCTGTACAA ATGGTTAGTT CTAGTCCTAG TGCTCCTGTT GATGTTGATT TGGATGACGT
TAACCACAAA AGCAACACAG CTACTGGGCT TCAAGAATCG CATGTTGAGG TTAGAGGCAA TGGAATTTCA GTTGCAGCTG
AGAAAACATC TGATGATGGA TACAATTGGC GAAAATACGG GCAAAAACTT GTTAAAGGAA GTGAATTTCC ACGCAGTTAT
TACAAATGTA CACATCCTAA CTGTGAAGTG AAAAAACTGT TTGAACGCTC TCATGATGGT CAAATCGCGG AGATAATTTA
CAAGGGAACA CATGATCATC CTAAACCTCA ACCAAGCTGC CGATACTCTA CTGGTACTAT TATGTCTATT CAAGTAGAGA
GATCCGATAA GGATTCTTCT TTGGCTGGCC TAGATGACAA AGCATCCTCC ATGTATGGTC AGTTGTCCCA TGCTGCTGAG
CGCAACAGTG CTTCTGAGCC ATCAACCATA GCAACAAACG ATGATGGTTT AGAGGGTGTT GGGTTTGTGT CAAACAGGAT
TAGTGATGAC ACTGATGATG ATGATCCCTT CTCAAAGCGA AGAAAAATGG AACTTGGAAG TGTTGACATC ACTCCTGTAG
TGAAGCCTAT CCGGGAGCCA CGGGTTGTTG TACAAACTTT GAGTGAGGTT GATATATTGG ATGATGGGTA TCGCTGGCGT
AAGTATGGCC AAAAGGTGGT GAGAGGCAAT CCTAACCCAA GGAGTTATTA CAAATGCACA AATGCGGGTT GCCCTGTCAG
AAAACATGTG GAGAGGGCAT CTCATGATCC AAAAGCAGTG ATAACCACAT ATGAGGGTAA ACACAATCAT GATGTACCAG
CTGCAAAGAA TAGCAGCCAT GACATGGCAG TAGCTGCAGC TGGACAGACA AGAATTAAGT TGGAAGAAAG TGATACTATT
AGCCTTGACC TTGGGATGGG AATTAGCTCA GCTGCTGAAC ATAGATCAAA CGCACAAGGG AAAATAATGC ACTCTGAATT
TGGGAGCACT CAAACTCACA CTAGTAATTC TAATTTCAAG TTTGTTCATA CTACCTCAGC TCCAGTATAC TTTGGTGTTC
TAAATAACAG CTCTAATCCC TATGGTTCTA GAGACAATAG GAGTGATGGT CCAGCTTTAA ACCATGCCTC GTATCCTTGC
CCACAGAGCA TGGGAAGAAT ACTAATGGGT CCATGAAGTT GATCACACAA CAGACATGAA AATAAAAGTT CTGAGTAACA
TTTTACTTTG TTTTTAATTT TTGGCGGGTA TAGCTTCAAA GGTGTAACGT CTCATTTTCT GTACGGAAAT GCAGATAGTT
CTTTTATGTT TATATCACTA TTTGAGAGCT GCCGTTATGT AGAATTGGTA GCAGCTCCAT CATGTTGACT TTTAAATCTC
TGTAATTGTA TAATTATTTA TAATCATATC CAAATTCTTC TGTATAAATA TGAGGCTGAT GTCAAAGTTA C

>Vigan.03G022600.01
ATGGACGCCT CCGCCGAGCC CAGCCCGAGT TCGGAGCTAC GCCTCAACGG GGCATCCGAG GATCCAAATC GAGGTGGGTC
GGGTCAGAAT TCGACGGCGA GGTACAAGCT GATTGCGCCG GCGAAGCTTC CGATCTCGAG GTCGCCGTGC ATCACGATTC
CTCCAGGACT GAGTCCGACA TCGTTTCTGG AATCACCGGT TCTTCTCTCT AACATGAAGG TGGAGTCTTC ACCAACTACA
GGGTCCCTCC GCAAGCTTCA ACAAACAGTA CATGGTTCTA AGGCCTCTGC TACATTTGCA GTAACCACTG CATGCTTCAA
TACCAATACT GTTGATGACA GGAAATCAAG CTTCTTTGAG TTTAAACCAC TCAACAGGTT GAATATGGTT CCTGCAGACT
TCAATAACCA TGTTATCAAA CAATCAACTC AAGCAGAAGG TCTAGGAAAA GCACAATCAT TTGTTTCCTC ACCATTAGTT
GAAAGTGAGA TAGCAGTTCC TGCTAACGAA TTAAGTCTAT CATCACCTGT ACAAATGGTT AGTTCTAGTC CTAGTGCTCC
TGTTGATGTT GATTTGGATG ACGTTAACCA CAAAAGCAAC ACAGCTACTG GGCTTCAAGA ATCGCATGTT GAGGTTAGAG
GCAATGGAAT TTCAGTTGCA GCTGAGAAAA CATCTGATGA TGGATACAAT TGGCGAAAAT ACGGGCAAAA ACTTGTTAAA
GGAAGTGAAT TTCCACGCAG TTATTACAAA TGTACACATC CTAACTGTGA AGTGAAAAAA CTGTTTGAAC GCTCTCATGA
TGGTCAAATC GCGGAGATAA TTTACAAGGG AACACATGAT CATCCTAAAC CTCAACCAAG CTGCCGATAC TCTACTGGTA
CTATTATGTC TATTCAAGTA GAGAGATCCG ATAAGGATTC TTCTTTGGCT GGCCTAGATG ACAAAGCATC CTCCATGTAT
GGTCAGTTGT CCCATGCTGC TGAGCGCAAC AGTGCTTCTG AGCCATCAAC CATAGCAACA AACGATGATG GTTTAGAGGG
TGTTGGGTTT GTGTCAAACA GGATTAGTGA TGACACTGAT GATGATGATC CCTTCTCAAA GCGAAGAAAA ATGGAACTTG
GAAGTGTTGA CATCACTCCT GTAGTGAAGC CTATCCGGGA GCCACGGGTT GTTGTACAAA CTTTGAGTGA GGTTGATATA
TTGGATGATG GGTATCGCTG GCGTAAGTAT GGCCAAAAGG TGGTGAGAGG CAATCCTAAC CCAAGGAGTT ATTACAAATG
CACAAATGCG GGTTGCCCTG TCAGAAAACA TGTGGAGAGG GCATCTCATG ATCCAAAAGC AGTGATAACC ACATATGAGG
GTAAACACAA TCATGATGTA CCAGCTGCAA AGAATAGCAG CCATGACATG GCAGTAGCTG CAGCTGGACA GACAAGAATT
AAGTTGGAAG AAAGTGATAC TATTAGCCTT GACCTTGGGA TGGGAATTAG CTCAGCTGCT GAACATAGAT CAAACGCACA
AGGGAAAATA ATGCACTCTG AATTTGGGAG CACTCAAACT CACACTAGTA ATTCTAATTT CAAGTTTGTT CATACTACCT
CAGCTCCAGT ATACTTTGGT GTTCTAAATA ACAGCTCTAA TCCCTATGGT TCTAGAGACA ATAGGAGTGA TGGTCCAGCT
TTAAACCATG CCTCGTATCC TTGCCCACAG AGCATGGGAA GAATACTAAT GGGTCCATGA 

>Vigan.03G022600.01
MDASAEPSPS SELRLNGASE DPNRGGSGQN STARYKLIAP AKLPISRSPC ITIPPGLSPT SFLESPVLLS NMKVESSPTT
GSLRKLQQTV HGSKASATFA VTTACFNTNT VDDRKSSFFE FKPLNRLNMV PADFNNHVIK QSTQAEGLGK AQSFVSSPLV
ESEIAVPANE LSLSSPVQMV SSSPSAPVDV DLDDVNHKSN TATGLQESHV EVRGNGISVA AEKTSDDGYN WRKYGQKLVK
GSEFPRSYYK CTHPNCEVKK LFERSHDGQI AEIIYKGTHD HPKPQPSCRY STGTIMSIQV ERSDKDSSLA GLDDKASSMY
GQLSHAAERN SASEPSTIAT NDDGLEGVGF VSNRISDDTD DDDPFSKRRK MELGSVDITP VVKPIREPRV VVQTLSEVDI
LDDGYRWRKY GQKVVRGNPN PRSYYKCTNA GCPVRKHVER ASHDPKAVIT TYEGKHNHDV PAAKNSSHDM AVAAAGQTRI
KLEESDTISL DLGMGISSAA EHRSNAQGKI MHSEFGSTQT HTSNSNFKFV HTTSAPVYFG VLNNSSNPYG SRDNRSDGPA
LNHASYPCPQ SMGRILMGP*