GBrowse Details

Vigan.03G025500.01

Basic Information:
Name: Vigan.03G025500.01
Multiple alignment
Variant Information
Position: Chr03:1947691..1951881 (+ strand)
Length: 4191
Functional Information:
Description: Similar to Uncharacterized protein. [I1M6L6, Glycine max]
GO: Molecular Function: methyltransferase activity (GO:0008168)
InterPro: SAM dependent carboxyl methyltransferase (IPR005299)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.77,2.32,0.23,4.14,1.16,3.89,1.49
Arabidopsis thaliana homolog: AT5G55250.1
Automatic updates:
Name: PZ206913 NCBI(nuccore)
Organism: Arachis hypogaea
Description: Arachis hypogaea clone Col-1 indole-3-acetic acid carboxyl methyltransferase (IAMT) mRNA, partial cds.
PubMed ID: -
Status: Known Variant
Name: PZ206932 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max clone Col-1 indole-3-acetic acid carboxyl methyltransferase (IAMT) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:1947691..1947896 (+ strand)
Length: 206
Type: five_prime_UTR
Position: Chr03:1947897..1948007 (+ strand)
Length: 111
Type: CDS
Position: Chr03:1948240..1948659 (+ strand)
Length: 420
Type: CDS
Position: Chr03:1949998..1950273 (+ strand)
Length: 276
Type: CDS
Position: Chr03:1951031..1951387 (+ strand)
Length: 357
Type: CDS
Position: Chr03:1951388..1951881 (+ strand)
Length: 494
Type: three_prime_UTR


>Vigan.03G025500.01
CAGCTAACAG CACAAGTTAG CATAATATAC ATTGAAATAA TAATAATAAC AACAAGTAGA AGCCAACTTC CTTCTCTATA
TATACCAACT CTCCACCCTC TCAGTTTTCC AAACACTCTT TCTTTTGTCT CTTCTCAGAC ACACTTAATT TCTCTTTCAC
TCTTTCACTC TTTCATCTCA TCCAACAACT ACCTAGTCAC TGAATCATGG CTCCCATGGG AGACAATGTT GTTGTGTCCA
ACATGGAACT TGAAAGGTTG CTCAGCATGA AAGGAGGCAA AGGAGAAGCC AGCTATGCCA ACAATTCCCA AGCTCAGGCC
ATACATGCGA GGTCGATGCT TCATCTTCTC AGAGAGACTT TGGACAGAGT TGAGCTGGCT GAGGGACGAG AGGTGCCGTT
TGTGGTGGTG GACTTGGGCT GTTCGTGTGG GAGCAACACC ATAAACGTGG TGGATGTGAT GATAAAGCAC GTTATGAAAC
GGTACGAGGC GTTGGGGTGG CAGCCACCGG AGTTTTCAGC TTTCTTCTCA GACCTTCCCA GCAATGACTT CAACACACTC
TTTCAGCTGC TTCCTCCTCT CGCCAACCAT GGCGTCAGCA TGGAAGAATG CCTTGCCGCC GACAACCACC GCTCCTACTT
CGCCGCCGGA GTCCCCGGTT CTTTCTACCG GAGGCTTTTT CCGGCGAGGT CTGTGGATGT TTTCCACTCA GCTTTCTCTT
TGCACTGGCT TTCTCAGGTG CCAGAAAGTG TTGTGGACAA AAGGTCAAGT GCATACAACA AAGGAAGAGT GTTTATCCAT
GGTGCTGATG AGAGCACAGC AAATGCTTAC AAGAAACAAT TCCAAACAGA TTTGGCAGGG TTTCTGATGG CAAGGTCAGT
GGAGATGAAG AGAGAGGGGT CCATGTTCTT AGTTTGCTTG GCCAGAACTT CAGTGGACCC TACAGACCAA GGTGGGGCAG
GCCTTCTTTT TGGGACCCAC TTTCAGGATG CTTGGGATGA TCTTGTCCAA GAGGGGTTGA TTAGTCAAGA AAAACGAGAC
AGTTTTAACA TTCCAGTTTA TGCAGCAAGC CTGCAAGACT TCAAGGAGGT GGTTGAAGCG AATGGTTCAT TCACCATAGA
CAAGCTTGAG GTATTCAAAG GAGGAAGTCC ACTTGTGGTG AATCAACCAG ATGATGCAAG TGAAGTAGGA AGAGCTCTAG
CCAACAGCTG CAGGACCGTG TCAGGAGTTC TTGTTGATGC CCACATTGGT GACAAACTAA GTGAGGAACT TTTTCTTAGA
GTGGAGCGTA GAGCCACTAG CCATGCCAAA GAGCTATTAG AGCAACTGCA GTTCTTTCAC ATAGTTGCAT CCCTTTCCTT
TAGAGACTGA GAGAAAAAGG TTACTATTTG AAGAAGATAA CTAGACGACA AAGGCTTTTT CTCCACCACC CTCTCTCCCT
TTTTTCTTTG TGTGTTGTGA TACCGCATAG GAGGAGTCAG AATGCACAAA AGAAAGAGAA AAAGAGAGGT TGACTACTTC
CAACCTATTG TTTTCTCCCT CTTTTGCGTG TTGTTTGTCT GTCATATTGC TGACTCTAGC TACTTGCCAT GCATTATGCA
CTTTCTGACT TATGTTCCCT TGCCTCTGAA CTAATTTTCC TCTCTACATT AGTGTGCATA TCTTGTGAAA GTTGTATGAA
TGGAACTTGT ACCTAACAAG CTGGTTGTTG GATATGCTAT TTCATTTTAG TCATATTGTC CTTTCTTCCT TCTCCTAGTC
AATCTAAAAC CTTCATTTAG TATTTCATAA GACAATCAAA TAGGTAGAAA AATGGTTTGT TCTGTTCCCT TGTAATTTAA
AGATTGAAAC ACGGCTTTTT TTTT

>Vigan.03G025500.01
ATGGCTCCCA TGGGAGACAA TGTTGTTGTG TCCAACATGG AACTTGAAAG GTTGCTCAGC ATGAAAGGAG GCAAAGGAGA
AGCCAGCTAT GCCAACAATT CCCAAGCTCA GGCCATACAT GCGAGGTCGA TGCTTCATCT TCTCAGAGAG ACTTTGGACA
GAGTTGAGCT GGCTGAGGGA CGAGAGGTGC CGTTTGTGGT GGTGGACTTG GGCTGTTCGT GTGGGAGCAA CACCATAAAC
GTGGTGGATG TGATGATAAA GCACGTTATG AAACGGTACG AGGCGTTGGG GTGGCAGCCA CCGGAGTTTT CAGCTTTCTT
CTCAGACCTT CCCAGCAATG ACTTCAACAC ACTCTTTCAG CTGCTTCCTC CTCTCGCCAA CCATGGCGTC AGCATGGAAG
AATGCCTTGC CGCCGACAAC CACCGCTCCT ACTTCGCCGC CGGAGTCCCC GGTTCTTTCT ACCGGAGGCT TTTTCCGGCG
AGGTCTGTGG ATGTTTTCCA CTCAGCTTTC TCTTTGCACT GGCTTTCTCA GGTGCCAGAA AGTGTTGTGG ACAAAAGGTC
AAGTGCATAC AACAAAGGAA GAGTGTTTAT CCATGGTGCT GATGAGAGCA CAGCAAATGC TTACAAGAAA CAATTCCAAA
CAGATTTGGC AGGGTTTCTG ATGGCAAGGT CAGTGGAGAT GAAGAGAGAG GGGTCCATGT TCTTAGTTTG CTTGGCCAGA
ACTTCAGTGG ACCCTACAGA CCAAGGTGGG GCAGGCCTTC TTTTTGGGAC CCACTTTCAG GATGCTTGGG ATGATCTTGT
CCAAGAGGGG TTGATTAGTC AAGAAAAACG AGACAGTTTT AACATTCCAG TTTATGCAGC AAGCCTGCAA GACTTCAAGG
AGGTGGTTGA AGCGAATGGT TCATTCACCA TAGACAAGCT TGAGGTATTC AAAGGAGGAA GTCCACTTGT GGTGAATCAA
CCAGATGATG CAAGTGAAGT AGGAAGAGCT CTAGCCAACA GCTGCAGGAC CGTGTCAGGA GTTCTTGTTG ATGCCCACAT
TGGTGACAAA CTAAGTGAGG AACTTTTTCT TAGAGTGGAG CGTAGAGCCA CTAGCCATGC CAAAGAGCTA TTAGAGCAAC
TGCAGTTCTT TCACATAGTT GCATCCCTTT CCTTTAGAGA CTGA

>Vigan.03G025500.01
MAPMGDNVVV SNMELERLLS MKGGKGEASY ANNSQAQAIH ARSMLHLLRE TLDRVELAEG REVPFVVVDL GCSCGSNTIN
VVDVMIKHVM KRYEALGWQP PEFSAFFSDL PSNDFNTLFQ LLPPLANHGV SMEECLAADN HRSYFAAGVP GSFYRRLFPA
RSVDVFHSAF SLHWLSQVPE SVVDKRSSAY NKGRVFIHGA DESTANAYKK QFQTDLAGFL MARSVEMKRE GSMFLVCLAR
TSVDPTDQGG AGLLFGTHFQ DAWDDLVQEG LISQEKRDSF NIPVYAASLQ DFKEVVEANG SFTIDKLEVF KGGSPLVVNQ
PDDASEVGRA LANSCRTVSG VLVDAHIGDK LSEELFLRVE RRATSHAKEL LEQLQFFHIV ASLSFRD*