GBrowse Details

Vigan.03G029100.01

Basic Information:
Name: Vigan.03G029100.01
Multiple alignment
Variant Information
Position: Chr03:2272831..2276249 (+ strand)
Length: 3419
Functional Information:
Description: Similar to Uncharacterized protein. [I1JJB8, Glycine max]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:140.66,35.73,94.32,735.00,53.43,138.43,28.98,281.29
Arabidopsis thaliana homolog: AT4G26850.1, AT5G55120.1
Automatic updates:
Name: NM_001254055 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max GDP-L-galactose phosphorylase 1-like (LOC100806541), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:2272831..2273553 (+ strand)
Length: 723
Type: five_prime_UTR
Position: Chr03:2273554..2273677 (+ strand)
Length: 124
Type: CDS
Position: Chr03:2274166..2274275 (+ strand)
Length: 110
Type: CDS
Position: Chr03:2274367..2274426 (+ strand)
Length: 60
Type: CDS
Position: Chr03:2274547..2274789 (+ strand)
Length: 243
Type: CDS
Position: Chr03:2274877..2275062 (+ strand)
Length: 186
Type: CDS
Position: Chr03:2275176..2275424 (+ strand)
Length: 249
Type: CDS
Position: Chr03:2275513..2275845 (+ strand)
Length: 333
Type: CDS
Position: Chr03:2275846..2276249 (+ strand)
Length: 404
Type: three_prime_UTR


>Vigan.03G029100.01
AAAAAAGATT CTGTAATGGA ATATTCGTGG AAGCAGGAGT GCTCAAATAA TGGTCCTGCT CTTACTTAAA TAATGTGAAG
AAAAACCAAA AACATACAAA ACAACGAAAC CACCGTTTCT CTTTCAATTA TTGTCTCTTC TCTCTCACTC TCTGCTATTT
CATTCATCCA TAGATTCTTC TTCCAACACA CAACACAACA CTTAGATTCA ACCATCTTTC TCTCTCTTCT TTTTCTTCAC
TTTGGTCTCT CGCAGTTCTT AACTCATAAG TCTTATCTAT CTATATAAGA AGAAAGGCAG CTCCTTTTTC TGGCTCACAG
TCACAAGCTT CATCGAATCT AAGTGAGAGA AGTTTGCATG TTGAAGAAAT CATCGAGAAA AGGGAAAGAG AAAGAAGAGG
GGATTGGGTT GAAACCCGGG GTTGAAGCGT TGCAGACATC ACGGCTATTC TAAGAGTCTA TCGCTTTCTC ATTCATGTCC
CAACTGTACG ACGGGCGGGT TGCATAATTC TCGCCAACCC TTCGCCGCAC GGTGGGCGTG GTGCGCTGCC TTCAGAAGGT
GGTAGTCCCT CCGACCTCCT CTTCCTCGCC GGTGGCGGTT TCTCCTCCTC CTGCTAGTTT CTTCTTTCTC CTTTCTTCTA
CTTAGTCAAC TGCTTTAACA AAACACGCGC AAACACTTTC GCTCTTTCTT CTTCTTCTTC TTTCTCTTCT TTGATTTCAC
AAAATGATGC TCAAAATCAA GAGGGTTCCT ACTGTCGTTT CCAACTACCA AAAAGATGAT GTTGGAGACT CTTCTCGTCC
CGTCGGAGGT TGTGGTCGGA ATTGCCTCAA AGCTTGCTGC ATTCCAGATG CAAAACTTCC TCTGTATGCT TTTAAGAAGG
TTAATGGAAA GGATTTGGCT ATGCATGAAT GCGGGGAGCC TCCCGTGGCA TTCCTGGACT CGCTTCTTCT TGGAGAGTGG
GAAGAACGCA TGCAGAGAGG ACTTTTCCGC TATGATGTTA CTGCCTGTGA AACCAAGGTG ATTCCTGGTG AATATGGTTT
CGTGGCTCAG CTTAATGAGG GTCGTCACCT CAAGAAGAGA CCAACTGAAT TCCGAGTTGA TAAGGTTCTG CAACCATTCG
ATGAAAACAA ATTCAACTTT ACGAAAGTTG GGCAAGAAGA GGTCATCTTC CAATTTGAAG CTAGCGACGA CGGAAAAATC
CAGTTCTTCC CAAATGCTCC AGTTGATGTT GATAATTCTC CCAGTTTTGT TGCCATCAAT GTCAGTCCTA TTGAGTATGG
GCATGTTTTG CTGATTCCGC GCATATTTGA GTGTTTGCCC CAAAGGATTG ACCGTGAGAG CTTCCTGCTT GCACTTCACA
TGGCAGTGGA AGCTGATAAT CCATATTTTC GATTGGGTTA CAACAGCTTG GGTGCTTTTG CAACTATTAA CCATCTTCAC
TTCCAGGCTT ACTATTTGGC TCTGCCCTTT CCCATTGAGA AGGCCCCCAC CAAGAAAATT GCAAATTTAA ATGGTGGGGT
GAAGATATCT GAACTGTTGA AGTATCCTGT TAGAGGTCTT GTCTTTGAGG GTGGAGATAC TCTGGAAGAT TTATCAAATG
CTGTTTCAGA TGCTTGTATA TGTCTTCAAA ACAGTAATAT ACCGTTCAAT GTTCTTATTA CTGACTGTGG AAAGCAAGTC
TTTCTGTTAC CACAGTGTTA CGCAGAGAAA CAAGCTCTTG GAGAAGTGGA TGCTGAGCTT CTTGACACCC AAGTTAACCC
TGCTGTGTGG GAAATTAGTG GGCACATGGT TTTAAAGAGG AAGAAGGATT ATGATGAGGC TTCTGAAGGC AATGCTTGGA
GGCTTCTTGC TGAGGTATCC CTCTCCGAAG AGAGGTTCCA AGAGGTCAAC GACCTTATTT TTGAAGCCAT TGGCTGCAGT
GAATTGGACG ATAATGTTGA AGGTGACAAG GAAGTTGATG CAGTCAGCTC AAGTGCACAC TCTACTGTGG TGGTAGCTGG
TTCAAAAGAA TGTGTTGTTC TACAGTAACA AGGCTCTACT ACTATGAACA AAACTCATGG AATCTGCAGC ATTCTAAGAA
TAATTGCTGA ACTATTATAT CACCGTTTAA GTTGTAGTAC TGTGTTGTTC TTGAGCATTA AGGTCATGTG TTTTATGTAT
TTACCTTTTT TCATGTGGAA GTCGATGAAA TAACTACTCA CCTGAGTAGT GTTGGTGATT TGGGTGTATG GTAATATGCT
TGACTTGACT GTCTCTTGTG GCTTTCATGC TGCAAGAAAT AATAAATTCA GGTATCTGTT TGTTCAGGGC TAAATCAAAC
TGCAGCTTGA ATTCTCCAGA ATGAAACTTT CACTTGCTGT ATTTCGGGCT TCACTATGTA ATAAGTGTTA TGTTTGTATA
TTAATAAATG ATATTCTGAA TGTCTCTTGG GT

>Vigan.03G029100.01
ATGATGCTCA AAATCAAGAG GGTTCCTACT GTCGTTTCCA ACTACCAAAA AGATGATGTT GGAGACTCTT CTCGTCCCGT
CGGAGGTTGT GGTCGGAATT GCCTCAAAGC TTGCTGCATT CCAGATGCAA AACTTCCTCT GTATGCTTTT AAGAAGGTTA
ATGGAAAGGA TTTGGCTATG CATGAATGCG GGGAGCCTCC CGTGGCATTC CTGGACTCGC TTCTTCTTGG AGAGTGGGAA
GAACGCATGC AGAGAGGACT TTTCCGCTAT GATGTTACTG CCTGTGAAAC CAAGGTGATT CCTGGTGAAT ATGGTTTCGT
GGCTCAGCTT AATGAGGGTC GTCACCTCAA GAAGAGACCA ACTGAATTCC GAGTTGATAA GGTTCTGCAA CCATTCGATG
AAAACAAATT CAACTTTACG AAAGTTGGGC AAGAAGAGGT CATCTTCCAA TTTGAAGCTA GCGACGACGG AAAAATCCAG
TTCTTCCCAA ATGCTCCAGT TGATGTTGAT AATTCTCCCA GTTTTGTTGC CATCAATGTC AGTCCTATTG AGTATGGGCA
TGTTTTGCTG ATTCCGCGCA TATTTGAGTG TTTGCCCCAA AGGATTGACC GTGAGAGCTT CCTGCTTGCA CTTCACATGG
CAGTGGAAGC TGATAATCCA TATTTTCGAT TGGGTTACAA CAGCTTGGGT GCTTTTGCAA CTATTAACCA TCTTCACTTC
CAGGCTTACT ATTTGGCTCT GCCCTTTCCC ATTGAGAAGG CCCCCACCAA GAAAATTGCA AATTTAAATG GTGGGGTGAA
GATATCTGAA CTGTTGAAGT ATCCTGTTAG AGGTCTTGTC TTTGAGGGTG GAGATACTCT GGAAGATTTA TCAAATGCTG
TTTCAGATGC TTGTATATGT CTTCAAAACA GTAATATACC GTTCAATGTT CTTATTACTG ACTGTGGAAA GCAAGTCTTT
CTGTTACCAC AGTGTTACGC AGAGAAACAA GCTCTTGGAG AAGTGGATGC TGAGCTTCTT GACACCCAAG TTAACCCTGC
TGTGTGGGAA ATTAGTGGGC ACATGGTTTT AAAGAGGAAG AAGGATTATG ATGAGGCTTC TGAAGGCAAT GCTTGGAGGC
TTCTTGCTGA GGTATCCCTC TCCGAAGAGA GGTTCCAAGA GGTCAACGAC CTTATTTTTG AAGCCATTGG CTGCAGTGAA
TTGGACGATA ATGTTGAAGG TGACAAGGAA GTTGATGCAG TCAGCTCAAG TGCACACTCT ACTGTGGTGG TAGCTGGTTC
AAAAGAATGT GTTGTTCTAC AGTAA

>Vigan.03G029100.01
MMLKIKRVPT VVSNYQKDDV GDSSRPVGGC GRNCLKACCI PDAKLPLYAF KKVNGKDLAM HECGEPPVAF LDSLLLGEWE
ERMQRGLFRY DVTACETKVI PGEYGFVAQL NEGRHLKKRP TEFRVDKVLQ PFDENKFNFT KVGQEEVIFQ FEASDDGKIQ
FFPNAPVDVD NSPSFVAINV SPIEYGHVLL IPRIFECLPQ RIDRESFLLA LHMAVEADNP YFRLGYNSLG AFATINHLHF
QAYYLALPFP IEKAPTKKIA NLNGGVKISE LLKYPVRGLV FEGGDTLEDL SNAVSDACIC LQNSNIPFNV LITDCGKQVF
LLPQCYAEKQ ALGEVDAELL DTQVNPAVWE ISGHMVLKRK KDYDEASEGN AWRLLAEVSL SEERFQEVND LIFEAIGCSE
LDDNVEGDKE VDAVSSSAHS TVVVAGSKEC VVLQ*