GBrowse Details

Vigan.03G032600.01

Basic Information:
Name: Vigan.03G032600.01
Multiple alignment
Variant Information
Position: Chr03:2520296..2525260 (+ strand)
Length: 4965
Functional Information:
Description: Similar to Purple acid phosphatases. [G0T439, Glycine max]
GO: Molecular Function: acid phosphatase activity (GO:0003993)
Molecular Function: hydrolase activity (GO:0016787)
Molecular Function: metal ion binding (GO:0046872)
InterPro: Phosphoesterase domain (IPR004843)
Purple acid phosphatase-like, N-terminal (IPR008963)
Purple acid phosphatase, N-terminal (IPR015914)
Iron/zinc purple acid phosphatase-like C-terminal domain (IPR025733)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:13.79,5.79,5.07,13.07,7.62,16.96,23.89,7.37
Arabidopsis thaliana homolog: AT3G20500.1
Automatic updates:
Name: NM_001252699 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max purple acid phosphatase 4 (PAP4), mRNA.
PubMed ID: 24595918 NCBI(pubmed)
Status: Known Variant
Name: NM_001252742 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max purple acid phosphatase 18-like (LOC100787977), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:2520296..2520366 (+ strand)
Length: 71
Type: five_prime_UTR
Position: Chr03:2520367..2520519 (+ strand)
Length: 153
Type: CDS
Position: Chr03:2521084..2521752 (+ strand)
Length: 669
Type: CDS
Position: Chr03:2521922..2522110 (+ strand)
Length: 189
Type: CDS
Position: Chr03:2522193..2522281 (+ strand)
Length: 89
Type: CDS
Position: Chr03:2522438..2522657 (+ strand)
Length: 220
Type: CDS
Position: Chr03:2522658..2525260 (+ strand)
Length: 2603
Type: three_prime_UTR


>Vigan.03G032600.01
TTTTGCGATG AAGAGTAGAA AGAAGGATTG AAGTGGTAGC AGGTACTTTG TTGTCTCAGG CAGACACTGA TATGGAACAA
CCAAAACACA AACTTCTTCT GATTCTAACG CTTCTTTTTT CAACCGTCAC GGTTGAATCT GAATACCTTC GCCCTCTTCC
TCGTAAAACC TTAACCATCC CACTGTATTC AATTTCCAAG GCTCACTCCT CTTATCCTCA ACAGGTACAC ATTTCTTTGG
CAGGAGAGAA GCACATCAGA GTTACCTGGA TAACCGATGA TAAACATTCA CCCTCGTATG TAGAATACGG AACATTACCT
GGGAGATATG ACTCAATTGC TGAAGGAGAG TTCACCTCTT ATAACTATAT GTTATATACC TCAGGAACGA TACATCATGT
TGTAATTGGA CCTTTGGAAG ACAATACTGT GTACTTTTAC CGTTGTGGGG GAAAAGGTCC TGATTTCCAG CTCAAAACCC
CTCCAAACCA ATTTCCAATT GTTTTTGCTG TGGCTGGCGA TCTTGGTCAG ACTGGCTGGA CTAAATCAAC ACTGGCTCAC
ATTGACCAAT CTCAATATGA TGTCTACCTG CTTCCAGGAG ACCTTTCATA TGCTGATTGT ATGCAGCATC TGTGGGACAG
TTTTGGTGAA CTAGTGGAGC CGCTTGCTAG TACAAGGCCA TGGATGGTGA CAGAGGGCAA CCATGAAGAA GAGAACATAC
TCTTGTTAAC GGACAAGTTT GTGTCCTATA ATTCCAGATG GAAAATGCCA TTTGAGGAAA GTGGATCAAC TTCAAATCTC
TATTATTCTT TTGAAGTTGC TGGTGTCCAC GTTATCATGC TTGGCTCCTA TGAAGATTAT GATGTGTACT CTGAACAATA
TAGATGGCTA AAGGAAGATC TGTCAAAGGT TGATAGGGAA AGGACACCTT GGTTGCTTGT GTCATTTCAT ATACCGTGGT
ATAATAGTAA CAAGGCCCAT CAAGGTGCAG GGGATGATAT GATGGCAGCT ATTGAGCCGT TGCTTTATGC CGCTAGTGTT
GATTTAGTTA TTGCTGGTCA TGTTCACGCT TACGAACGTT CGAAACGTGT CTATAATGGA AGATTGGATC CCTGTGGTGC
TGTCCATATA ACTATAGGTG ATGGAGGAAA CAGGGAAGGC TTAGCTCGGA AGTATATAAA CCCACAGCCA AAGTGGTCAG
AATTCCGCGA AGCCAGTTTT GGTCACGGTG AGCTGAAGTT TGTAAACTCC ACTCATGCCC TCTGGAGTTG GCACAGGAAC
GATGATGACA ATTCAGTAAA AGTTGATGAT ATCTGGATAA ACTCTTTGGT CAGCTCGGGA TGCGTTGATC AGAAGACACA
TGAACTCAGA AGTACACTTA TGATACCCTA AAAGTTGTAT CTGCAAATGT TACTCCGTAA CCGTGTGGAT CAGCATAAGT
TCTGTAAAAA TATAGATGAT GAAACAATAC ATTAGTTTAC AATGGATCAC TAGCAGCAGA ATGGGTAAAG TCAGGTATTT
CAGTATTTGC CGCTCGTTTT GCTGGTACAT ATATTTAGAT ATTATAAGGA CTTGGACTAG TCAGTAAATT CAGCATAGGG
CGAGTTGTCT CTTTGCAATT GATGCTGTTG CTTGTTTAGT CTGAACCTAT AGGATTTGTT TCTGTATGTA CAGCAAAATA
AATTTGGTTG CTTACTGGTT AGTGAAAAAT GCATGCATTT TATATTCAGG ACTGGCATTC AGATTGTTGA TATGATTCTA
GATCCACGCA AAGAGTAAAG CCATGATGTC CGAAGGTCTA ATTAACAAAG TGCTGAAGAG TAATGGGACA TGATGGAATG
CAAATTAGCA ATCTAAGAAT AGGGTCACAT TATGGATTAT TTCGACTTTC ATTACATTTA AGCCATCTTA GCAAGTTTTA
CAAAGATTTG TAGAGAAACC GAGTTCTGAT AACAGATATC TGTATCTGGT GAATTGAGGC GGGCAAAATC TTTTCCCTTC
CTCCCCCTCT TTTTTTTTTC TTCCCCGTGA TAACAATTAA CTCCATTTTA CATTATCAAC ATTAAGTGGT TGGATTGCTC
TGGCCTGTTT CTGCTGTTTT TTGTGTAATT AATAACAAAC CGGCTCCATC CTCGCAATGT CTCTCGGTTT GATGTCGAGG
CCAGTTAGCA TGAGCAGCCA TGATTCTGTT CAAAAGTTGT AGGGGAACAG ACTGTCCTGT ATTTTCTTGA GAACGGCACT
GAGCAACACG CATAATGTAT TCATTTATTC AGTCTAAACA TAGATCAGGT CATGTAGATG TAGCAGAAGT AACGTCAAAA
ACTGCTAAAT TATCTTGATT CTAAAGATCC ATTCAGATTG TCCAATCATT AAAAGAGCGT TGGGCTACTA AAACATCGAT
ATAAAGGCAT AGTCTAGTTC CAGTAAACTG ATTGCTTTAC TCAGATTGCT CCTGTCCTTG TTCAGCATAT GGGGCACAGC
AATAATCTGT AGACTTTCAA TAAACTCATC GGAGAATGAA TTATCCATGG CATATCATAT ACAGATAATC TTGCCGGCCT
CTTGCGCGTT TTTGCATGCA GGAAATGGAT AATGAGGCCA AAACAAAAAA ACTCTTACAA AGTTCATGGT TCACAATTCA
TTTTAAATAG TTTATGTTTT GGGTTTAAGC ATCTTTTTCA AGCTGATCAA TCTAAAGAAG AAAGGACCTC AACTGGAGAA
GTGTTCGCTC AGTCTCTCTT CTTTACAGCG TCTCTGGTCT CCAACCATGG ACTCAAAAGT ATACAAGAGA CCATCCAAAC
CCTCTTGATT CTCCCCAACT GCCTTCAAGG CAAATACAAT ACTCTCAATA GTAGACAAAT AACCAGCTTT AGGCTGATGT
CTCACATCAC TATATAAGCT CGCCTCGTTC ACTTCTAACT TCACATGGGG CAAAACGTTC AACCAAGGAT TTTCGCTGTA
AATTCTTTTC GCCTTAGCCC ATGTTCCATC CAAAACAATC AAGTTCTTCA CCTCAAAACC AATAGCATTT AGGTCACTAA
TATTCACAGC TTTATCGGAG GGAAATAATA GCACTGATCC AGGACGAACC TCCAGCTCAA ACTCTTCACA TTCTTCTTCC
AAGTCTGCAT CCCCATTCAG TTGCTTTCTT TGAAATTTCT TCACCAAAAA CCCTTCTGAG AGTGCTTCAG AAGCTTCGGG
ATATGCCAAA ATATTGTCAA AGCTTAACTT GGGGGATTGA CATTGTGCCT GTGCTATCCA AATATGAGAC ATAGAGCTAA
TAGCACCATA TTTGCCAATG GCAACATTAA TAGCAAGCCT ACCACTATGT TCATGCACAC CTCTGGTTAA ACCACGATTT
GGAGGGACAA CATTTTTCTC AACTTCATCA TTCACCACTG CACCATCAGT GGTACTCACT TGAGTCCCAA CTTCAGCAAG
AGTGGGAGAA TCCAGAAAAC ATCCACGATC ATTTCTCAAA CCACATTTTT TGGCATTATC AGAATCGCTC AAGTTAGAGC
TTTTCTCAGA AAGTAGTTTC TGGGTGTCTC CAAATTCGCA ATACGGACGA GAAAGGAGTA CATTCATCAC GTTTCCAGCA
AGACCCGTTT GGCAATTCGG ATCCAACAAG CGAATCTGGA ACCGGGCGTG GAAATTAACA TCAGAAACAG TTGCAACGGT
GAGATTCTTG AGGCCCAATC TAGCGATTCT GGTAGAATTG AGGGGGTGCT TACGCTCAAG AGCGTGCTGC AGAATGGTTA
CGTGGACGGA ATTTTGGACA CACGGTGTGA GGATTCGAGA GCAGAGACAC GTTCGTGTGG GTTTGGAACA CGACGGGCAA
ATGGGTCTTT TAGAATTGCC CTGAGTTGTC GACATCAAAA TCTTGGTGAC TCTCCGCTGA AGGAGCTTGT GACCGTGTGA
AAGGTTGAGC TTGAACCAGG GGGTGGTTTG GATTTGGGTA ACGAGAAAAA CCATCCCTAT AAGTTTGGTC TCTA

>Vigan.03G032600.01
ATGGAACAAC CAAAACACAA ACTTCTTCTG ATTCTAACGC TTCTTTTTTC AACCGTCACG GTTGAATCTG AATACCTTCG
CCCTCTTCCT CGTAAAACCT TAACCATCCC ACTGTATTCA ATTTCCAAGG CTCACTCCTC TTATCCTCAA CAGGTACACA
TTTCTTTGGC AGGAGAGAAG CACATCAGAG TTACCTGGAT AACCGATGAT AAACATTCAC CCTCGTATGT AGAATACGGA
ACATTACCTG GGAGATATGA CTCAATTGCT GAAGGAGAGT TCACCTCTTA TAACTATATG TTATATACCT CAGGAACGAT
ACATCATGTT GTAATTGGAC CTTTGGAAGA CAATACTGTG TACTTTTACC GTTGTGGGGG AAAAGGTCCT GATTTCCAGC
TCAAAACCCC TCCAAACCAA TTTCCAATTG TTTTTGCTGT GGCTGGCGAT CTTGGTCAGA CTGGCTGGAC TAAATCAACA
CTGGCTCACA TTGACCAATC TCAATATGAT GTCTACCTGC TTCCAGGAGA CCTTTCATAT GCTGATTGTA TGCAGCATCT
GTGGGACAGT TTTGGTGAAC TAGTGGAGCC GCTTGCTAGT ACAAGGCCAT GGATGGTGAC AGAGGGCAAC CATGAAGAAG
AGAACATACT CTTGTTAACG GACAAGTTTG TGTCCTATAA TTCCAGATGG AAAATGCCAT TTGAGGAAAG TGGATCAACT
TCAAATCTCT ATTATTCTTT TGAAGTTGCT GGTGTCCACG TTATCATGCT TGGCTCCTAT GAAGATTATG ATGTGTACTC
TGAACAATAT AGATGGCTAA AGGAAGATCT GTCAAAGGTT GATAGGGAAA GGACACCTTG GTTGCTTGTG TCATTTCATA
TACCGTGGTA TAATAGTAAC AAGGCCCATC AAGGTGCAGG GGATGATATG ATGGCAGCTA TTGAGCCGTT GCTTTATGCC
GCTAGTGTTG ATTTAGTTAT TGCTGGTCAT GTTCACGCTT ACGAACGTTC GAAACGTGTC TATAATGGAA GATTGGATCC
CTGTGGTGCT GTCCATATAA CTATAGGTGA TGGAGGAAAC AGGGAAGGCT TAGCTCGGAA GTATATAAAC CCACAGCCAA
AGTGGTCAGA ATTCCGCGAA GCCAGTTTTG GTCACGGTGA GCTGAAGTTT GTAAACTCCA CTCATGCCCT CTGGAGTTGG
CACAGGAACG ATGATGACAA TTCAGTAAAA GTTGATGATA TCTGGATAAA CTCTTTGGTC AGCTCGGGAT GCGTTGATCA
GAAGACACAT GAACTCAGAA GTACACTTAT GATACCCTAA 

>Vigan.03G032600.01
MEQPKHKLLL ILTLLFSTVT VESEYLRPLP RKTLTIPLYS ISKAHSSYPQ QVHISLAGEK HIRVTWITDD KHSPSYVEYG
TLPGRYDSIA EGEFTSYNYM LYTSGTIHHV VIGPLEDNTV YFYRCGGKGP DFQLKTPPNQ FPIVFAVAGD LGQTGWTKST
LAHIDQSQYD VYLLPGDLSY ADCMQHLWDS FGELVEPLAS TRPWMVTEGN HEEENILLLT DKFVSYNSRW KMPFEESGST
SNLYYSFEVA GVHVIMLGSY EDYDVYSEQY RWLKEDLSKV DRERTPWLLV SFHIPWYNSN KAHQGAGDDM MAAIEPLLYA
ASVDLVIAGH VHAYERSKRV YNGRLDPCGA VHITIGDGGN REGLARKYIN PQPKWSEFRE ASFGHGELKF VNSTHALWSW
HRNDDDNSVK VDDIWINSLV SSGCVDQKTH ELRSTLMIP*