GBrowse Details

Vigan.03G041500.01

Basic Information:
Name: Vigan.03G041500.01
Multiple alignment
Variant Information
Position: Chr03:3243169..3244246 (- strand)
Length: 1078
Functional Information:
Description: Similar to glutathione S-transferase. [Q8L8H9, Phaseolus acutifolius]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Glutathione S-transferase, N-terminal (IPR004045)
Glutathione S-transferase, C-terminal (IPR004046)
Glutathione S-transferase, C-terminal-like (IPR010987)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:3701.50,274.88,156.32,31.63,13.74,1678.55,7.57,15.38
Automatic updates:
Name: KY399360 NCBI(nuccore)
Organism: Medicago truncatula
Description: Medicago truncatula putative phi class glutathione transferase GSTF4 mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:3243169..3243216 (- strand)
Length: 48
Type: three_prime_UTR
Position: Chr03:3243217..3243671 (- strand)
Length: 455
Type: CDS
Position: Chr03:3243795..3243843 (- strand)
Length: 49
Type: CDS
Position: Chr03:3243939..3244082 (- strand)
Length: 144
Type: CDS
Position: Chr03:3244083..3244246 (- strand)
Length: 164
Type: five_prime_UTR

>Vigan.03G041500.01 class=Sequence position=Chr03:3243169..3244246 (- strand)
AAATATTATA TACAATCAAT CATGTAGTAG ATATTATTGT ATAAATAATA TTTTCTTAAT GTGATTTGAC TCTTTCACTT
GAGTCACTAT AAGAAGTGTT ACCCAGAAGC AAAGGTTGTG TTTGGCTCTT TCACTTCAGT ATTGTTTGTC GAAGAGAATC
AAAAATGGTG GTGAAGGTGT ACGGTCCCCA CTGTGCTTCC ACCAAACGGG TGCTGGTTTG TCTCATTGAG AAGGAGATCG
AATTTGAGGT TGTCCCTGTC GATGTCACTA AGGGCGAGCA CAAAAATCCC GAGTATCTCA AGTTACAGGT TCAAAAACTC
TTTTTTTTTT CTCTCCTCTC TTGAAGATTC CTCCATTAAT TCTTTATCTT CTCATTCATC TTCTTTGTTG ATCACATCTG
CAGCCCTTTG GAGTTGTTCC CGTCATCCAA GATGGAGACT ACACCTTATA TGGTTAATTA CACTTTCATC TCCAAAACTT
TTCCTTTTTC CATTCATGTT TTGTTGAGTG ACTAAGGTTT ATAGTCGTTT ATTTTCCAAC CTTAAAATCT GCTGGTTTTT
GGTCTGTTTG TGCAGAATCA CGTGCCATAA TGAGGTATTA TGCAGAGAAA TACAGATCTG AAGGGGTTGA GTTGTTAGGG
AGGACAGCAG AAGAGAGGGG TGTAGTGGAA CAATGGCTGG AAGTTGAAGC ACATAACTTT AATCCACCGG CGTATGATTT
GGCCGTGCAT GTTCTGTTTG GTCCATTATT AGGCATCACT CCAGATCCAA AGGTGGCGGA AGAGAGTGAA GCAAAGCTGG
TGAAGGTGTT GGATGTTTAT GAGGAGAGAC TGTCAAAGAG CAAGTATCTG GGTGGGGATT TCTTCAGTCT TGCTGACATA
AGTCATCTTC CATTCACAGA TTACATTGTG AATAAGATGA ATAAAGGGTA TTTGATTAAA GAGAGGAAGC ATGTGAGTGC
TTGGTGGGAT GAGATAAGCA GTAGACCGTC GTGGAAGAAG GTTATCGAAC TCTACCAACC TCCGATCTAG TTCTTCAATG
GAGTCTGCAA TTATTGTCAT CTATCTTTCT ACGTGCTT

>Vigan.03G041500.01
AAATATTATA TACAATCAAT CATGTAGTAG ATATTATTGT ATAAATAATA TTTTCTTAAT GTGATTTGAC TCTTTCACTT
GAGTCACTAT AAGAAGTGTT ACCCAGAAGC AAAGGTTGTG TTTGGCTCTT TCACTTCAGT ATTGTTTGTC GAAGAGAATC
AAAAATGGTG GTGAAGGTGT ACGGTCCCCA CTGTGCTTCC ACCAAACGGG TGCTGGTTTG TCTCATTGAG AAGGAGATCG
AATTTGAGGT TGTCCCTGTC GATGTCACTA AGGGCGAGCA CAAAAATCCC GAGTATCTCA AGTTACAGCC CTTTGGAGTT
GTTCCCGTCA TCCAAGATGG AGACTACACC TTATATGAAT CACGTGCCAT AATGAGGTAT TATGCAGAGA AATACAGATC
TGAAGGGGTT GAGTTGTTAG GGAGGACAGC AGAAGAGAGG GGTGTAGTGG AACAATGGCT GGAAGTTGAA GCACATAACT
TTAATCCACC GGCGTATGAT TTGGCCGTGC ATGTTCTGTT TGGTCCATTA TTAGGCATCA CTCCAGATCC AAAGGTGGCG
GAAGAGAGTG AAGCAAAGCT GGTGAAGGTG TTGGATGTTT ATGAGGAGAG ACTGTCAAAG AGCAAGTATC TGGGTGGGGA
TTTCTTCAGT CTTGCTGACA TAAGTCATCT TCCATTCACA GATTACATTG TGAATAAGAT GAATAAAGGG TATTTGATTA
AAGAGAGGAA GCATGTGAGT GCTTGGTGGG ATGAGATAAG CAGTAGACCG TCGTGGAAGA AGGTTATCGA ACTCTACCAA
CCTCCGATCT AGTTCTTCAA TGGAGTCTGC AATTATTGTC ATCTATCTTT CTACGTGCTT 

>Vigan.03G041500.01
ATGGTGGTGA AGGTGTACGG TCCCCACTGT GCTTCCACCA AACGGGTGCT GGTTTGTCTC ATTGAGAAGG AGATCGAATT
TGAGGTTGTC CCTGTCGATG TCACTAAGGG CGAGCACAAA AATCCCGAGT ATCTCAAGTT ACAGCCCTTT GGAGTTGTTC
CCGTCATCCA AGATGGAGAC TACACCTTAT ATGAATCACG TGCCATAATG AGGTATTATG CAGAGAAATA CAGATCTGAA
GGGGTTGAGT TGTTAGGGAG GACAGCAGAA GAGAGGGGTG TAGTGGAACA ATGGCTGGAA GTTGAAGCAC ATAACTTTAA
TCCACCGGCG TATGATTTGG CCGTGCATGT TCTGTTTGGT CCATTATTAG GCATCACTCC AGATCCAAAG GTGGCGGAAG
AGAGTGAAGC AAAGCTGGTG AAGGTGTTGG ATGTTTATGA GGAGAGACTG TCAAAGAGCA AGTATCTGGG TGGGGATTTC
TTCAGTCTTG CTGACATAAG TCATCTTCCA TTCACAGATT ACATTGTGAA TAAGATGAAT AAAGGGTATT TGATTAAAGA
GAGGAAGCAT GTGAGTGCTT GGTGGGATGA GATAAGCAGT AGACCGTCGT GGAAGAAGGT TATCGAACTC TACCAACCTC
CGATCTAG

>Vigan.03G041500.01
MVVKVYGPHC ASTKRVLVCL IEKEIEFEVV PVDVTKGEHK NPEYLKLQPF GVVPVIQDGD YTLYESRAIM RYYAEKYRSE
GVELLGRTAE ERGVVEQWLE VEAHNFNPPA YDLAVHVLFG PLLGITPDPK VAEESEAKLV KVLDVYEERL SKSKYLGGDF
FSLADISHLP FTDYIVNKMN KGYLIKERKH VSAWWDEISS RPSWKKVIEL YQPPI*