GBrowse Details

Vigan.03G049800.01

Basic Information:
Name: Vigan.03G049800.01
Multiple alignment
Variant Information
Position: Chr03:4680833..4684374 (- strand)
Length: 3542
Functional Information:
Description: Similar to uncharacterized LOC101203554. [XP_004156055.1, Cucumis sativus]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:24.99,20.44,13.73,18.22,23.24,22.15,17.82,14.16
Structure :
Position: Chr03:4680833..4681214 (- strand)
Length: 382
Type: three_prime_UTR
Position: Chr03:4681215..4681268 (- strand)
Length: 54
Type: CDS
Position: Chr03:4681486..4681545 (- strand)
Length: 60
Type: CDS
Position: Chr03:4682342..4682382 (- strand)
Length: 41
Type: CDS
Position: Chr03:4682557..4682629 (- strand)
Length: 73
Type: CDS
Position: Chr03:4682711..4682761 (- strand)
Length: 51
Type: CDS
Position: Chr03:4684198..4684263 (- strand)
Length: 66
Type: CDS
Position: Chr03:4684264..4684374 (- strand)
Length: 111
Type: five_prime_UTR


>Vigan.03G049800.01
GAATAAAAAG CAATTATCAT AGTGACTGAG GTTGCGTTTC TCCGTTCTCA GTGAAGTCTT CTCCTTCAAG AAGACGAAGA
ATTAGAAGAA AGAAGGGTTT GCAGTGCAAG CATGGATGAA GCTGAATTTC AACGCCTTCT CCAACTCTTC CCCGTTGTTC
GTTGTCGCGA TTACTCTGCA GAAGCAGCGT CATCCAGACA AATTCCATCT GGGGTAGCAC AGAATGAGGT AAAGCAATGG
CAAGATGCAT GGGATGAAAA GGAAATTAAC GATTCTGAGC AGCAAGGACT TGATCAACAT GATTCATTTT GGAGCAAGCT
AAAGACGGAG GCTGCTAGGA AGATGGATGC AGAAGAAGCA GAGAGATTTT GCAAGGCATT CCGACAAATC CATAAGAAAC
TAGTGAATGA AGAGTTGAGT TTAGATGCAG CTCGAAGCTT CTTAAAATCA TCCTAGAGTT CCAAAGAATA TGCTTTCAAC
ATTTTCCTTG TGATTCAACA ATCGGCCATT GTAATTCTTT TGTACTGTAT CAAAGTGTTT TATAATACCT GTGACATGGC
ATTTTAATTT TTATCTGTAG TTATTTATTA CTTTTGTAAT ATTAAGAACT AATATATCTT CTTTTTTTCA TTTCAATTGT
TTGAATTTCG ATTTTTATGT GCATAGAAGG TGGAGTTTCA ATCATTCCGT GTGGTTCTGA TCGTGTCAGC ATCATCGATA
AAGTCTGTTT GTTAGCATTG ATACTGAAAT TAATTTGTAC ATTCTCAACT TACAAACCTA TATATTGTAA CTGCAAAAAC
ACAAAACAGA AAAGAGTTTT TCTCTTTTTA TCCTTTTA

>Vigan.03G049800.01
ATGGATGAAG CTGAATTTCA ACGCCTTCTC CAACTCTTCC CCGTTGTTCG TTGTCGCGAT TACTCTGCAG AAGCAGCGTC
ATCCAGACAA ATTCCATCTG GGGTAGCACA GAATGAGGTA AAGCAATGGC AAGATGCATG GGATGAAAAG GAAATTAACG
ATTCTGAGCA GCAAGGACTT GATCAACATG ATTCATTTTG GAGCAAGCTA AAGACGGAGG CTGCTAGGAA GATGGATGCA
GAAGAAGCAG AGAGATTTTG CAAGGCATTC CGACAAATCC ATAAGAAACT AGTGAATGAA GAGTTGAGTT TAGATGCAGC
TCGAAGCTTC TTAAAATCAT CCTAG

>Vigan.03G049800.01
MDEAEFQRLL QLFPVVRCRD YSAEAASSRQ IPSGVAQNEV KQWQDAWDEK EINDSEQQGL DQHDSFWSKL KTEAARKMDA
EEAERFCKAF RQIHKKLVNE ELSLDAARSF LKSS*