GBrowse Details

Vigan.03G055800.01

Basic Information:
Name: Vigan.03G055800.01
Multiple alignment
Variant Information
Position: Chr03:5281045..5286116 (- strand)
Length: 5072
Functional Information:
Description: Similar to uncharacterized protein. [B8ACJ3, Oryza sativa subsp. indica]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:25.95,50.57,23.53,17.35,23.77,37.24,20.42,23.34
Arabidopsis thaliana homolog: AT5G21070.1
Automatic updates:
Name: NM_001253322 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100808307 (LOC100808307), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001253986 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100789121 (LOC100789121), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:5281045..5281358 (- strand)
Length: 314
Type: three_prime_UTR
Position: Chr03:5281359..5281569 (- strand)
Length: 211
Type: CDS
Position: Chr03:5282688..5283015 (- strand)
Length: 328
Type: CDS
Position: Chr03:5285813..5285960 (- strand)
Length: 148
Type: CDS
Position: Chr03:5285961..5286116 (- strand)
Length: 156
Type: five_prime_UTR


>Vigan.03G055800.01
CAATATTTTA TTCCGATAGA TATAGAATGA ATTTTCCCAC CTTTTTTCGC CATTTTATTC AGATTTAGTT ATTCTCATCC
CAATCGGAAA CAGTGCTTGC ATGCTTGTAG AGTTCCACAA CAGATCTGAA CGATCGATTC TCTATTTTCG TGGGCAATGG
GTGGCTTCAC CGCTGAAGAT CTGTCCACCA TCGGCGGAAT CGCCACCGTC TCGCTCCTCC ATTCCTTCAT TCCCACTCAC
TGGCTTCCTT TCTCCATTGT AGGTCGCGCG CAGAAATGGA CTCTTTCCAC AACTCTTATC GTCACTGCTC TTGGAGCAAT
TTTGCATGTA ATATCCACTT CACTGCTTGG TATAACGGCA ATTACCATGG CGAACACTAT TGCTGGTGAA GAAACAGTGC
ATAAGGTTGC TTCACTTTTG CTTGTATTTC TGGGTGGTAG TTATATACTG TTGTTTCTGA CGGGAAAGGG TGGCCATAGT
CATTCACACA ACCAACCAAT GGAGAAAATG GCTGTAGCTG GACTTATTCT TGTTCCCGCT TTGTCTCCTT GTGCTACAAC
TCTCCCAGTA TTTCTCGCAG TTGGAAATTC ATCTTCCATG ATGGTGCTTG CCATCGTAGT ACTATTGTTC AGCACAATAA
CTGTGATGAC TTCGCTGGTA GCATTGTCGT TTTACGGAGC CAGTCAGCTG AAGTTTCACT GGGTGGAGCG GTATGACAAA
CTTCTTGTTG GTTCAGTGCT TTGTTTAGTT GGAGTCTTGA CCCTACTTTT CCATGATCAT GATCATGGAG ACGTGATTTC
GATTGGAGAG CAGCACTCAC ATAGGAAGAT TATTTCCTTT TGAGATCTAT AAATGTTTTG TAATTACATG TTTTTGAGCA
TCGTCAAGGT GGTGTTTTCA TCTTGTAGTA GAAGGAAAAG AAAAGAAGGA AAACAGATGT TTCTGTTCAG GAGAATTGAT
CACCTTGGTC AAGTTTAAGT GTTTGTATAC TGAGTTTACT GTGAGAAGTT AATGAATATT CAAATTATCA ATTAGTTTAG
TCTAGTTCTG AAAGAATGAC CACTCCCCAA TTTCACTTTC ACTGTCCTCT GACTTGTGCT TTTAAACCTT GTATTGAAAT
CAAAATGTTT TTATAATTGA GATAAACATT TTTTTTA

>Vigan.03G055800.01
ATGGGTGGCT TCACCGCTGA AGATCTGTCC ACCATCGGCG GAATCGCCAC CGTCTCGCTC CTCCATTCCT TCATTCCCAC
TCACTGGCTT CCTTTCTCCA TTGTAGGTCG CGCGCAGAAA TGGACTCTTT CCACAACTCT TATCGTCACT GCTCTTGGAG
CAATTTTGCA TGTAATATCC ACTTCACTGC TTGGTATAAC GGCAATTACC ATGGCGAACA CTATTGCTGG TGAAGAAACA
GTGCATAAGG TTGCTTCACT TTTGCTTGTA TTTCTGGGTG GTAGTTATAT ACTGTTGTTT CTGACGGGAA AGGGTGGCCA
TAGTCATTCA CACAACCAAC CAATGGAGAA AATGGCTGTA GCTGGACTTA TTCTTGTTCC CGCTTTGTCT CCTTGTGCTA
CAACTCTCCC AGTATTTCTC GCAGTTGGAA ATTCATCTTC CATGATGGTG CTTGCCATCG TAGTACTATT GTTCAGCACA
ATAACTGTGA TGACTTCGCT GGTAGCATTG TCGTTTTACG GAGCCAGTCA GCTGAAGTTT CACTGGGTGG AGCGGTATGA
CAAACTTCTT GTTGGTTCAG TGCTTTGTTT AGTTGGAGTC TTGACCCTAC TTTTCCATGA TCATGATCAT GGAGACGTGA
TTTCGATTGG AGAGCAGCAC TCACATAGGA AGATTATTTC CTTTTGA

>Vigan.03G055800.01
MGGFTAEDLS TIGGIATVSL LHSFIPTHWL PFSIVGRAQK WTLSTTLIVT ALGAILHVIS TSLLGITAIT MANTIAGEET
VHKVASLLLV FLGGSYILLF LTGKGGHSHS HNQPMEKMAV AGLILVPALS PCATTLPVFL AVGNSSSMMV LAIVVLLFST
ITVMTSLVAL SFYGASQLKF HWVERYDKLL VGSVLCLVGV LTLLFHDHDH GDVISIGEQH SHRKIISF*