GBrowse Details

Vigan.03G059100.01

Basic Information:
Name: Vigan.03G059100.01
Multiple alignment
Variant Information
Position: Chr03:5672637..5675175 (+ strand)
Length: 2539
Functional Information:
Description: Similar to CM0545.330.nc protein. [B0BLA9, Lotus japonicus]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.96,9.00,49.04,1.83,10.96,2.35,10.16
Arabidopsis thaliana homolog: AT3G44020.1
Automatic updates:
Name: NM_001250471 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100305836 (LOC100305836), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:5672637..5672662 (+ strand)
Length: 26
Type: five_prime_UTR
Position: Chr03:5672663..5672950 (+ strand)
Length: 288
Type: CDS
Position: Chr03:5673576..5673612 (+ strand)
Length: 37
Type: CDS
Position: Chr03:5674570..5674653 (+ strand)
Length: 84
Type: CDS
Position: Chr03:5674901..5674953 (+ strand)
Length: 53
Type: CDS
Position: Chr03:5674954..5675175 (+ strand)
Length: 222
Type: three_prime_UTR


>Vigan.03G059100.01
TATTATTATT TGATTTTGTT TTATCAATGG CCACTCTTCC TTACTGCACT CTTCATCCTC TATCTTCTTC TCTCAGTCCT
TCTTCCACTT TGGTTCACCT TTGTTCATGC TCTTCCACAC CTTCTCGTCC TCTTCTCCAA TTCCCCTCCA ATCTCAGACG
CAAAGCCACC AAGAAGCCCA GACTGTTTTT GATCGTTCAC CCCATTTTTC TCTTTAACGG CGTCGCCACC ACTTTCTATT
TTGACACCCA AACAGTCATC GTTACTGTTA GTGTTTTGGC CGCCATTGCT CTTTCTCTCT TCCTTGGCCT CAAGGGTGAT
CCGGTGCCTT GTGAGCGATG TGGTGGCAAT GGTGGGACAA AATGCGTGTT TTGTGACTAT GGCAAGATGA AGCAAGATAT
GGGGTTAATT AACTGTAAAG TATGCAAGGG TTCAGGATTG ATTTTCTGCA AGAAATGTGG AGGTTCAGGC TATTCCCGTC
GGCTATGAGC TGTGAAATTC CTCCTATATG TTAAGACCAT CTGTTCTGAG ATATGTAAGA TGTTGTAACA ATTTTACTTC
ATAGTGTCTT TTTCTCTGTG AATCATTTTA ATCAAGTTAT TCTGAAGTCC TCTTAGCTAA TTGGTTTTTC CATAAAAATT
AGTCTAATTT TGGTAATAGT GTTTAATATG GTTTCTTCTT GAAAATATAA GTTAGGTAAA AACATGGTTG 

>Vigan.03G059100.01
ATGGCCACTC TTCCTTACTG CACTCTTCAT CCTCTATCTT CTTCTCTCAG TCCTTCTTCC ACTTTGGTTC ACCTTTGTTC
ATGCTCTTCC ACACCTTCTC GTCCTCTTCT CCAATTCCCC TCCAATCTCA GACGCAAAGC CACCAAGAAG CCCAGACTGT
TTTTGATCGT TCACCCCATT TTTCTCTTTA ACGGCGTCGC CACCACTTTC TATTTTGACA CCCAAACAGT CATCGTTACT
GTTAGTGTTT TGGCCGCCAT TGCTCTTTCT CTCTTCCTTG GCCTCAAGGG TGATCCGGTG CCTTGTGAGC GATGTGGTGG
CAATGGTGGG ACAAAATGCG TGTTTTGTGA CTATGGCAAG ATGAAGCAAG ATATGGGGTT AATTAACTGT AAAGTATGCA
AGGGTTCAGG ATTGATTTTC TGCAAGAAAT GTGGAGGTTC AGGCTATTCC CGTCGGCTAT GA

>Vigan.03G059100.01
MATLPYCTLH PLSSSLSPSS TLVHLCSCSS TPSRPLLQFP SNLRRKATKK PRLFLIVHPI FLFNGVATTF YFDTQTVIVT
VSVLAAIALS LFLGLKGDPV PCERCGGNGG TKCVFCDYGK MKQDMGLINC KVCKGSGLIF CKKCGGSGYS RRL*