GBrowse Details

Vigan.03G071500.01

Basic Information:
Name: Vigan.03G071500.01
Multiple alignment
Variant Information
Position: Chr03:6898879..6900573 (- strand)
Length: 1695
Functional Information:
Description: Similar to Uncharacterized protein. [G7K7C1, Medicago truncatula]
GO: Molecular Function: protein dimerization activity (GO:0046983)
InterPro: Myc-type, basic helix-loop-helix (bHLH) domain (IPR011598)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.30,4.00,17.20,0.09,27.02,0.99,0.88
Automatic updates:
Name: NM_001249149 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306253 (LOC100306253), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:6898879..6899039 (- strand)
Length: 161
Type: three_prime_UTR
Position: Chr03:6899040..6899135 (- strand)
Length: 96
Type: CDS
Position: Chr03:6899442..6899609 (- strand)
Length: 168
Type: CDS
Position: Chr03:6899736..6899861 (- strand)
Length: 126
Type: CDS
Position: Chr03:6900342..6900419 (- strand)
Length: 78
Type: CDS
Position: Chr03:6900420..6900573 (- strand)
Length: 154
Type: five_prime_UTR


>Vigan.03G071500.01
TGGGGAGAAA ACACATGAGA TCATATGGAT TTGAGAGCTC ATCCCTTCTT TTAAATTACC ACAGAACTCT GCAGAGGTTA
TAGCAAAAGA AAAGAACCAG AGTGAAAAAA CCAGAAGGAT CATAAGCTGT GAGAGAGAAA GAGACCGCGA AAAAATGGTT
TCCAAAGAGC AAAAGAGAGC AGCACTGCAT GAGCAGCTGC AACATCTTCG ATCTCTTACT AACTCTCATG CTCTAAACGA
AAGTTCGATC GTTATCGATG CATCGAAGTA TATTGAAAAG TTAAAGCAAA AGGTAGAAAG ACTGAATCAA GAGATAGCTT
CTGCAGAAAC TTCAACTGCA CACGACCCAT TGCCTATGGT TACAGTAGAA ACCTTGGAAA AGGGATTTCT TATAAATGTT
TACTCAGCAA AAGGGTGTTC AGGTCTGCTT GTTTCCATAT TGGAGGTCTT TGAAGAGATG AGACTAACTG TGCTCGAAGC
TAGGGTTTCG TGTACAGACA CTTTTCGATT TCAAGCTGTT GGAGAAAATG AAGAAGAAAG AGACACCATT GATGCACATA
CTGTCAAAGA AGCTGTAGGA CAAGCAATAA AGAACTGGAG CAAAGGTGGC GATGAAGAGT AAATCAGTAA TTTGCATTTT
TCATCTTTTT TTCATTTTCT TTCATGGTGG CTAGATGGTA ATTTGTTCCT TATGGAATTG ATTTAGCTTC CAATTTTTAA
GAAAATATGT CAGCGTGTCT AAGATACATA TGAAGATAAT GAAGAAGAGT AGTTGATGAT TGA

>Vigan.03G071500.01
ATGGTTTCCA AAGAGCAAAA GAGAGCAGCA CTGCATGAGC AGCTGCAACA TCTTCGATCT CTTACTAACT CTCATGCTCT
AAACGAAAGT TCGATCGTTA TCGATGCATC GAAGTATATT GAAAAGTTAA AGCAAAAGGT AGAAAGACTG AATCAAGAGA
TAGCTTCTGC AGAAACTTCA ACTGCACACG ACCCATTGCC TATGGTTACA GTAGAAACCT TGGAAAAGGG ATTTCTTATA
AATGTTTACT CAGCAAAAGG GTGTTCAGGT CTGCTTGTTT CCATATTGGA GGTCTTTGAA GAGATGAGAC TAACTGTGCT
CGAAGCTAGG GTTTCGTGTA CAGACACTTT TCGATTTCAA GCTGTTGGAG AAAATGAAGA AGAAAGAGAC ACCATTGATG
CACATACTGT CAAAGAAGCT GTAGGACAAG CAATAAAGAA CTGGAGCAAA GGTGGCGATG AAGAGTAA

>Vigan.03G071500.01
MVSKEQKRAA LHEQLQHLRS LTNSHALNES SIVIDASKYI EKLKQKVERL NQEIASAETS TAHDPLPMVT VETLEKGFLI
NVYSAKGCSG LLVSILEVFE EMRLTVLEAR VSCTDTFRFQ AVGENEEERD TIDAHTVKEA VGQAIKNWSK GGDEE*