GBrowse Details

Vigan.03G078500.01

Basic Information:
Name: Vigan.03G078500.01
Multiple alignment
Variant Information
Position: Chr03:7674622..7677569 (+ strand)
Length: 2948
Functional Information:
Description: Similar to Protein yippee-like. [V7BA85, Phaseolus vulgaris]
InterPro: Yippee/Mis18 (IPR004910)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:42.33,23.08,48.10,31.89,18.63,51.70,41.90,47.16
Automatic updates:
Name: NM_001251118 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500435 (LOC100500435), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:7674622..7674985 (+ strand)
Length: 364
Type: five_prime_UTR
Position: Chr03:7674986..7675081 (+ strand)
Length: 96
Type: CDS
Position: Chr03:7676267..7676310 (+ strand)
Length: 44
Type: CDS
Position: Chr03:7676834..7676942 (+ strand)
Length: 109
Type: CDS
Position: Chr03:7677050..7677105 (+ strand)
Length: 56
Type: CDS
Position: Chr03:7677209..7677290 (+ strand)
Length: 82
Type: CDS
Position: Chr03:7677291..7677569 (+ strand)
Length: 279
Type: three_prime_UTR


>Vigan.03G078500.01
AATAAATAAT TACGGGGGAA GCAGACACGT CTTGTCGGGT TCTCTTTTCG CAGAAAAAAG CGAAGATTGA TTGTTTCTCT
CTCCACATTT CTTGCAAGTC CTCTCCTTCT CTTCTCTTCT CTTCTCTTCT CAGGTAATTT TCAACGATTC CCTTTTTCAT
TTCCCTTCCT CTTCATCATC GTCATCGTAA TCTTCATCTT CTTCTTTTTC TTCTTCTATC CTTCATCGAT TGACGCTATG
TCTAGATCAT CACCGCTTCA ATTTGACCTT TGCGTGATTT CGCTTTGACT GAGTCCTTTC TTTAGTTTAC CCTTCGTCTG
AAAATCCCGG TTGATCTTCA GCCTAGAATT TTCCGAATTG ACCTATGGGG AGGTTGTTTG TGGTTCATCT CGAGGGGAAG
GTCTATAGCT GCAAACACTG CCGTACCCAT CTTGCTCTCT ATGAAGACAT CGTTTCCAAG TCTTTCCACA GCAGACATGG
GAAAGCTTAT CTCTTCAGTA AGGTCGTGAA TGTTACTGCT GGAGAAAACG AGGACAGACA GATGCTCACT GGGATGCATA
CTGTGGCTGA CATTTTCTGT GTGGGGTGTG GATCAATTGT GGGTTGGAAA TACGAGACAG CTCATGAAAA AATCCAGAAG
TACAAGGAAG GAAAATCTGT ACTTGAACGG TACAAGGTGT CAGGTCCTGA TAGCTGCAAT TATTGGGTCG GCCATGAAGC
ACATGGTGGA AGTGATGCAG ATGACGCTTA GTCATCTGCC TTTGACAATT GAATTGTACA TTCTTTAATC CCCTTCCCCT
GTTGTTCAAC GAGTGTGGAT TTTATTCGGG CAGTATTGCA AAATCTGCAT GTTGTCCCAA AGACAATTTA AATACATTTG
ATTGTTAATT CTGATGTAAA AAAAAAAACA ACTAATGTTA AAACTTCTAA GTTCGAATCA ATCATGTTTT TCTTGTTGTA
TATTGATCTC CATTCGCTAT TTTCAATTGT CAGGAGTTGG CTTGTAGCGT CAAACTCAAG TACTTTCGGG 

>Vigan.03G078500.01
ATGGGGAGGT TGTTTGTGGT TCATCTCGAG GGGAAGGTCT ATAGCTGCAA ACACTGCCGT ACCCATCTTG CTCTCTATGA
AGACATCGTT TCCAAGTCTT TCCACAGCAG ACATGGGAAA GCTTATCTCT TCAGTAAGGT CGTGAATGTT ACTGCTGGAG
AAAACGAGGA CAGACAGATG CTCACTGGGA TGCATACTGT GGCTGACATT TTCTGTGTGG GGTGTGGATC AATTGTGGGT
TGGAAATACG AGACAGCTCA TGAAAAAATC CAGAAGTACA AGGAAGGAAA ATCTGTACTT GAACGGTACA AGGTGTCAGG
TCCTGATAGC TGCAATTATT GGGTCGGCCA TGAAGCACAT GGTGGAAGTG ATGCAGATGA CGCTTAG

>Vigan.03G078500.01
MGRLFVVHLE GKVYSCKHCR THLALYEDIV SKSFHSRHGK AYLFSKVVNV TAGENEDRQM LTGMHTVADI FCVGCGSIVG
WKYETAHEKI QKYKEGKSVL ERYKVSGPDS CNYWVGHEAH GGSDADDA*