GBrowse Details

Vigan.03G081400.01

Basic Information:
Name: Vigan.03G081400.01
Multiple alignment
Variant Information
Position: Chr03:8019265..8022997 (- strand)
Length: 3733
Functional Information:
Description: Similar to Organic anion transporter. [U5TZK8, Phaseolus vulgaris]
GO: Cellular Component: membrane (GO:0016020)
InterPro: Drug/metabolite transporter (IPR000620)
Triose-phosphate transporter domain (IPR004853)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.84,1.57,18.58,15.66,18.18,18.57,19.83,20.45
Arabidopsis thaliana homolog: AT3G11320.1, AT5G05820.1
Automatic updates:
Name: NM_001255256 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max probable sugar phosphate/phosphate translocator At3g11320-like (LOC100817995), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:8019265..8019808 (- strand)
Length: 544
Type: three_prime_UTR
Position: Chr03:8019809..8019955 (- strand)
Length: 147
Type: CDS
Position: Chr03:8020642..8020870 (- strand)
Length: 229
Type: CDS
Position: Chr03:8020975..8021078 (- strand)
Length: 104
Type: CDS
Position: Chr03:8022223..8022663 (- strand)
Length: 441
Type: CDS
Position: Chr03:8022664..8022997 (- strand)
Length: 334
Type: five_prime_UTR


>Vigan.03G081400.01
TCTTTTTAAA ACAAAATTAC CAACCCATTA CATTTGATGA CAGGGAAAAT AAAAATAATA AAATAAAAAG GAAGAAAGGG
AATAAAAGAA AGCAGAGGGA AGCGAAGGAC CTGTTTGTTT ACGCGCTTTG CCTTTGGCAT CCATTGATAA AATCAGTTGC
TGGGTTTTGA GCCGAAACAA ACAGTCCCTC GCCCTCGATT GGAACATTGG AATCAATCAA TCAAATCAAA TCAAATCAGT
GAGCGGTGGC GATGGAGGAA GGAGCGGGTT GTGAGATTGA TGGAAGGGAA TTTTAGACGG AAGGTTCTCA GATCCACGCT
CTCTCCATCA CAGAATGAAG GGTGGGAGCC GTTTCTTCAC CATAGCTCTG GTCTCCGCCT GGTACGCCAC CAACATTGGG
GTTTTGCTCC TTAACAAGTA CCTTCTCAGT AACTATGGCT TCAAGTACCC TATATTCCTC ACCATGTGCC ACATGACCGC
TTGTTCCCTC TTCAGCTACG TCGCCATCGC CTGGCTCAGG CTCGTTCCCA TGCAGACCAT ACGCTCCCGC CTCCAGTTCC
TCAAGATCGC CGCTCTCAGC CTCGTCTTCT GCGTCTCCGT CGTCTTCGGC AACGTCTCCC TCCGCTACCT CCCCGTCTCC
TTCAACCAGG CCATCGGCGC CACCACTCCC TTCTTCACCG CCGTTTTCGC CTATCTCATC ACCTTCAAGA GAGAGGCCTG
GCTCACCTAC CTCACCCTCG TCCCCGTCGT CGCCGGCGTC GTCATTGCCA GCGGGAGTGA ACCGAGCTTC CATTTATTTG
GATTCATAGT ATGTGTTGCA GCTACAGCTG CCCGAGCCTT AAAATCAGTG TTGCAAGGAA TTTTACTTTC TTCTGAAGGA
GAGAAGCTGA ATTCTATGAA CCTTCTTCTT TATATGGCTC CAATTGCTGT TGTTTTCCTT CTCCCTGCCA CACTACTGAT
GGAAGAAAAT GTGATTGGCA TTACATTGGC TCTTGCCAGA GATGATGTGA AGATCATTTG GTATCTGCTA TTTAATTCAG
CACTTGCTTA TCTTGTCAAC CTGACCAATT TCTTGGTCAC CAAACATACC AGTGCTCTTA CCCTGCAGGT ACTTGGGAAT
GCTAAAGGGG CTGTAGCAGT AGTAGTTTCA ATTCTGATAT TTAGAAACCC AGTGTCAGTC ACTGGAATGA TGGGTTATTC
ATTCACAGTC CTTGGAGTAG TACTCTATAG TGAAGCCAAA AAGCGAAGCA AGTGATACAG ATGCTGTCAT TCATGAGATT
TGGGAAGTCA GCAATGGATT CCCTATATTT GTTTTCATCC CTGTGCGGAC AACCTCGAGA TTCCGTGAGG CAAATTTGTT
AGCATGATTG TGATCAGAAT CCGGATGTTT CAGACTATAT ATACAATTTT TTTACCCCAC ATGGAAAGCC TCATTAAACG
GGTTCCCCAC CGTTTTAGCA CCTGTGCAGA AATAGCCCAC AGTACAAAGT TTCAATAAGT GACTGATCTC TTTGAAGAAA
GAGTTGTAGA ATTGGATCCT CTGCTCATTT GTTGTTTACA TTTGTTTATT GATGATAAAG TTCGTGGTTA TTTTCATAGC
AAAAGTTCTG TATTGCCTAT CCCAAAACAA TGTCTAGCGT GTAATATCTT CTTCTTAATG GGGGTTGAGG AGATTCTTTA
GTCTTTCAAA CTAGGAAATT ATACAACTAT TTGTTCATTA TGTGTTAGAA TGTAGTCAGA TACCCTTTTT TATTTTACAA
ATATATTTAG AATCTGCATT GACTTATTTT ATAAAAATA

>Vigan.03G081400.01
ATGAAGGGTG GGAGCCGTTT CTTCACCATA GCTCTGGTCT CCGCCTGGTA CGCCACCAAC ATTGGGGTTT TGCTCCTTAA
CAAGTACCTT CTCAGTAACT ATGGCTTCAA GTACCCTATA TTCCTCACCA TGTGCCACAT GACCGCTTGT TCCCTCTTCA
GCTACGTCGC CATCGCCTGG CTCAGGCTCG TTCCCATGCA GACCATACGC TCCCGCCTCC AGTTCCTCAA GATCGCCGCT
CTCAGCCTCG TCTTCTGCGT CTCCGTCGTC TTCGGCAACG TCTCCCTCCG CTACCTCCCC GTCTCCTTCA ACCAGGCCAT
CGGCGCCACC ACTCCCTTCT TCACCGCCGT TTTCGCCTAT CTCATCACCT TCAAGAGAGA GGCCTGGCTC ACCTACCTCA
CCCTCGTCCC CGTCGTCGCC GGCGTCGTCA TTGCCAGCGG GAGTGAACCG AGCTTCCATT TATTTGGATT CATAGTATGT
GTTGCAGCTA CAGCTGCCCG AGCCTTAAAA TCAGTGTTGC AAGGAATTTT ACTTTCTTCT GAAGGAGAGA AGCTGAATTC
TATGAACCTT CTTCTTTATA TGGCTCCAAT TGCTGTTGTT TTCCTTCTCC CTGCCACACT ACTGATGGAA GAAAATGTGA
TTGGCATTAC ATTGGCTCTT GCCAGAGATG ATGTGAAGAT CATTTGGTAT CTGCTATTTA ATTCAGCACT TGCTTATCTT
GTCAACCTGA CCAATTTCTT GGTCACCAAA CATACCAGTG CTCTTACCCT GCAGGTACTT GGGAATGCTA AAGGGGCTGT
AGCAGTAGTA GTTTCAATTC TGATATTTAG AAACCCAGTG TCAGTCACTG GAATGATGGG TTATTCATTC ACAGTCCTTG
GAGTAGTACT CTATAGTGAA GCCAAAAAGC GAAGCAAGTG A

>Vigan.03G081400.01
MKGGSRFFTI ALVSAWYATN IGVLLLNKYL LSNYGFKYPI FLTMCHMTAC SLFSYVAIAW LRLVPMQTIR SRLQFLKIAA
LSLVFCVSVV FGNVSLRYLP VSFNQAIGAT TPFFTAVFAY LITFKREAWL TYLTLVPVVA GVVIASGSEP SFHLFGFIVC
VAATAARALK SVLQGILLSS EGEKLNSMNL LLYMAPIAVV FLLPATLLME ENVIGITLAL ARDDVKIIWY LLFNSALAYL
VNLTNFLVTK HTSALTLQVL GNAKGAVAVV VSILIFRNPV SVTGMMGYSF TVLGVVLYSE AKKRSK*