GBrowse Details

Vigan.03G093000.01

Basic Information:
Name: Vigan.03G093000.01
Multiple alignment
Variant Information
Position: Chr03:9382599..9383220 (+ strand)
Length: 622
Functional Information:
Description: Similar to Gibberellic acid-stimulated protein 1. [F1BXA4, Glycine soja]
InterPro: Gibberellin regulated protein (IPR003854)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,0.00,0.00,0.19,0.94,0.77,0.17
Automatic updates:
Name: NM_001248226 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max gibberellin-regulated protein 1 (GASA1), mRNA.
PubMed ID: 31123969 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr03:9382599..9382706 (+ strand)
Length: 108
Type: five_prime_UTR
Position: Chr03:9382707..9382790 (+ strand)
Length: 84
Type: CDS
Position: Chr03:9382867..9382900 (+ strand)
Length: 34
Type: CDS
Position: Chr03:9382991..9383172 (+ strand)
Length: 182
Type: CDS
Position: Chr03:9383173..9383220 (+ strand)
Length: 48
Type: three_prime_UTR

>Vigan.03G093000.01 class=Sequence position=Chr03:9382599..9383220 (+ strand)
CTTAAACAAC GGGATTCATT ATTAGGTTTC GTATTCGGTT GTGTTATTCC TATAAATATC CCTCCAATTC CTAACAAAGA
AATAAGAAAA GCTTACATTC ATATAGCCAT GGCAGCAGCT TCCTATTACA GCCCCATGAT GGTTGCCCTC TCTCTGCTTC
TTCTGTTGGT CTCATTCTCG AGTGTAGCTC AGGTACATTA GATTACATAA TGTAGATAAG CAGAATGATT AAATCTCTGA
CAAGTGTGTA TGTGATGTTT GAATTCAGGC TTATACGCGC AGCGGAACAC TTGGGCCTTC AGGTATGGAG TGGTGAAAAA
GGATGATGTT GGTTTTGGGT TAATTTGTAT GATGATGATG ATGATAATGA TAAATATGCG ATTGAATAAC AGATTGTAAA
CCGAAGTGCA CATACCGTTG CTCGGCAACT TCACACAAGA AGCCATGCAT GTTTTTCTGT CAGAAGTGTT GTGCCAAATG
CCTATGCGTT CCTCCTGGTA CATACGGCAA CAAGCAACTT TGCCCTTGTT ACAACTCCTG GAAGACCAAG GAAGGACGAC
CCAAATGCCC TTAAACCCAT CATACCTTCT TTCGCAGATT CTACTTTCTG TTCCTACAAT AT

>Vigan.03G093000.01
CTTAAACAAC GGGATTCATT ATTAGGTTTC GTATTCGGTT GTGTTATTCC TATAAATATC CCTCCAATTC CTAACAAAGA
AATAAGAAAA GCTTACATTC ATATAGCCAT GGCAGCAGCT TCCTATTACA GCCCCATGAT GGTTGCCCTC TCTCTGCTTC
TTCTGTTGGT CTCATTCTCG AGTGTAGCTC AGGCTTATAC GCGCAGCGGA ACACTTGGGC CTTCAGATTG TAAACCGAAG
TGCACATACC GTTGCTCGGC AACTTCACAC AAGAAGCCAT GCATGTTTTT CTGTCAGAAG TGTTGTGCCA AATGCCTATG
CGTTCCTCCT GGTACATACG GCAACAAGCA ACTTTGCCCT TGTTACAACT CCTGGAAGAC CAAGGAAGGA CGACCCAAAT
GCCCTTAAAC CCATCATACC TTCTTTCGCA GATTCTACTT TCTGTTCCTA CAATAT

>Vigan.03G093000.01
ATGGCAGCAG CTTCCTATTA CAGCCCCATG ATGGTTGCCC TCTCTCTGCT TCTTCTGTTG GTCTCATTCT CGAGTGTAGC
TCAGGCTTAT ACGCGCAGCG GAACACTTGG GCCTTCAGAT TGTAAACCGA AGTGCACATA CCGTTGCTCG GCAACTTCAC
ACAAGAAGCC ATGCATGTTT TTCTGTCAGA AGTGTTGTGC CAAATGCCTA TGCGTTCCTC CTGGTACATA CGGCAACAAG
CAACTTTGCC CTTGTTACAA CTCCTGGAAG ACCAAGGAAG GACGACCCAA ATGCCCTTAA 

>Vigan.03G093000.01
MAAASYYSPM MVALSLLLLL VSFSSVAQAY TRSGTLGPSD CKPKCTYRCS ATSHKKPCMF FCQKCCAKCL CVPPGTYGNK
QLCPCYNSWK TKEGRPKCP*