GBrowse Details

Vigan.03G132500.01

Basic Information:
Name: Vigan.03G132500.01
Multiple alignment
Variant Information
Position: Chr03:15257509..15260138 (+ strand)
Length: 2630
Functional Information:
Description: Similar to Fructose-bisphosphate aldolase. [V7B6Z4, Phaseolus vulgaris]
GO: Biological Process: glycolysis (GO:0006096)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332)
InterPro: Fructose-bisphosphate aldolase, class-I (IPR000741)
Aldolase-type TIM barrel (IPR013785)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:178.08,505.23,670.74,137.30,1463.30,1738.25,953.04,436.82
Arabidopsis thaliana homolog: AT2G36460.1, AT3G52930.1, AT4G26520.1, AT4G26530.1, AT5G03690.1
Automatic updates:
Name: NM_001255438 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max fructose-bisphosphate aldolase, cytoplasmic isozyme-like (LOC100778363), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001278967 NCBI(nuccore)
Organism: Cicer arietinum
Description: Cicer arietinum Fructose-bisphosphate aldolase, cytoplasmic isozyme (ALDC), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001354889 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative fructose-bisphosphate aldolase (LOC100783089), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:15257509..15257797 (+ strand)
Length: 289
Type: five_prime_UTR
Position: Chr03:15257798..15257825 (+ strand)
Length: 28
Type: CDS
Position: Chr03:15258288..15258515 (+ strand)
Length: 228
Type: CDS
Position: Chr03:15258980..15259800 (+ strand)
Length: 821
Type: CDS
Position: Chr03:15259801..15260138 (+ strand)
Length: 338
Type: three_prime_UTR


>Vigan.03G132500.01
ATAAATGTGG GCTGGTCAGT CCACCGAAAA CCAAAACCGC CATTCAATTT TGGTGTCCTT GATTCCAACG GCAGTCCACA
GAGACAAAAC ACACACTCAC CAACTTCGCG AGTGCGCTTC CTAAGACCCT AGTCCCTTTT GCTGTTGTCG TCTCCTCAAC
GCAACATCAT TATCACCATC ACTATTTAAA CCCCTCTTAA CCCTTTCCCT CGTGTTCACT TTTTCCCCAA TCTCACACCT
ACCTTGCTAT CTCCGTTCAA CTACCTCATC GTCTTCTTCC TCCTCGATCA TGTCTCACTT CAAGGGCAAG TACCATGATG
AGCTTATTGC AAATGCTGCC TACATTGGCA CTCCTGGAAA GGGTATTCTT GCTGCTGATG AGTCGACAGG TACGATTGGT
AAGCGTTTGG CCAGCATCAA TGTAGAGAAC GTTGAATCCA ACAGGCGTGC TCTTAGGGAG CTTCTTTTCA CTGCTCCTGG
TGCTCTTCAA TACCTCAGTG GAGTCATCCT CTTTGAGGAA ACCCTCTACC AGAGCACAGC TTCAGGCAAG CCCTTTGTTC
AGTTGTTGAC GGAGGCTGGT GTGCTTCCTG GTATCAAGGT TGACAAGGGC ACCGTTGAGC TTGCTGGGAC CGATGGGGAA
ACCACCACTC AGGGTCTGGA TGGCCTTGGT CAGCGTTGTG CCAAATACTA TGAAGCAGGT GCACGATTTG CCAAATGGCG
TGCCGTGCTA AAGATTGGTC CCAACGAGCC ATCAGAGCTC TCCATCCATG AGAATGCCTA TGGCTTGGCC AGATATGCTG
TCATATGCCA GGAAAATGGG TTGGTTCCCA TTGTTGAACC CGAGATCCTT GTTGATGGAC CTCATGACAT TCACAAGTGT
GCCGCTGTCA CCGAGCGTGT CCTTGCAGCA TGCTACAAGG CTTTGAATGA TCACCATGTT CTTCTTGAGG GAACTCTGTT
GAAGCCAAAC ATGGTGACAC CTGGATCTAA ATCTGCAAAG GTTGCTCCTG AGGTGGTTGC TGAACACACT GTTAGAGCCC
TGCAGCGAAC TGTACCTGCT GCAGTTCCTG CGGTAGTTTT CTTGTCTGGT GGACAGAGTG AGGAGGAGGC AACCCTCAAC
CTCAATGCCA TCAACCTGGT TAAGGGGAAG AAGCCATGGA CACTCTCTTT CTCTTTTGGA AGGGCACTTC AACAGAGTAC
CCTTAAGGCA TGGAGTGGAA AAGATGAGAA TGTGAAGAAG GCTCAAGAAG CCTTATTGGT AAGAGCCAAG GCTAACTCAG
AGGCAACTCT TGGAACCTAC AAGGGTGATT CAAAGCTTGC TGAGGGTGCC TCAGAGAGTC TCCATGTTGA GGACTACAAG
TACTGAGAAA AGTTGGTTCT CTTTATCGAG ACTAGTGCGG GGTAGGAATC GGGTGACAAC CGAATTTCTT GCTAATGAGT
ATTGTGGTTT GACTCCTCCC AGAATAATCG TTTGAAATTT TGCTTTTTGT TTTAGTGTTC TGCAATATCA TTTTAGTTTC
AATGTATTGG TCAAACATGC GCAAATGGAG GGGATTTTAA TTTGTTTTCT TGGAAGACAC CACCTTTCTA AACGAAGCTT
TGTGTTTACT TACAATTCTC CCGCTGTTTT GTTTTCGATG AAATCAATAA ATGGAAGGGT TTATGATATT CACTTTCCTA
CCTTTTTAAT TCATCAATAT TTTG

>Vigan.03G132500.01
ATGTCTCACT TCAAGGGCAA GTACCATGAT GAGCTTATTG CAAATGCTGC CTACATTGGC ACTCCTGGAA AGGGTATTCT
TGCTGCTGAT GAGTCGACAG GTACGATTGG TAAGCGTTTG GCCAGCATCA ATGTAGAGAA CGTTGAATCC AACAGGCGTG
CTCTTAGGGA GCTTCTTTTC ACTGCTCCTG GTGCTCTTCA ATACCTCAGT GGAGTCATCC TCTTTGAGGA AACCCTCTAC
CAGAGCACAG CTTCAGGCAA GCCCTTTGTT CAGTTGTTGA CGGAGGCTGG TGTGCTTCCT GGTATCAAGG TTGACAAGGG
CACCGTTGAG CTTGCTGGGA CCGATGGGGA AACCACCACT CAGGGTCTGG ATGGCCTTGG TCAGCGTTGT GCCAAATACT
ATGAAGCAGG TGCACGATTT GCCAAATGGC GTGCCGTGCT AAAGATTGGT CCCAACGAGC CATCAGAGCT CTCCATCCAT
GAGAATGCCT ATGGCTTGGC CAGATATGCT GTCATATGCC AGGAAAATGG GTTGGTTCCC ATTGTTGAAC CCGAGATCCT
TGTTGATGGA CCTCATGACA TTCACAAGTG TGCCGCTGTC ACCGAGCGTG TCCTTGCAGC ATGCTACAAG GCTTTGAATG
ATCACCATGT TCTTCTTGAG GGAACTCTGT TGAAGCCAAA CATGGTGACA CCTGGATCTA AATCTGCAAA GGTTGCTCCT
GAGGTGGTTG CTGAACACAC TGTTAGAGCC CTGCAGCGAA CTGTACCTGC TGCAGTTCCT GCGGTAGTTT TCTTGTCTGG
TGGACAGAGT GAGGAGGAGG CAACCCTCAA CCTCAATGCC ATCAACCTGG TTAAGGGGAA GAAGCCATGG ACACTCTCTT
TCTCTTTTGG AAGGGCACTT CAACAGAGTA CCCTTAAGGC ATGGAGTGGA AAAGATGAGA ATGTGAAGAA GGCTCAAGAA
GCCTTATTGG TAAGAGCCAA GGCTAACTCA GAGGCAACTC TTGGAACCTA CAAGGGTGAT TCAAAGCTTG CTGAGGGTGC
CTCAGAGAGT CTCCATGTTG AGGACTACAA GTACTGA

>Vigan.03G132500.01
MSHFKGKYHD ELIANAAYIG TPGKGILAAD ESTGTIGKRL ASINVENVES NRRALRELLF TAPGALQYLS GVILFEETLY
QSTASGKPFV QLLTEAGVLP GIKVDKGTVE LAGTDGETTT QGLDGLGQRC AKYYEAGARF AKWRAVLKIG PNEPSELSIH
ENAYGLARYA VICQENGLVP IVEPEILVDG PHDIHKCAAV TERVLAACYK ALNDHHVLLE GTLLKPNMVT PGSKSAKVAP
EVVAEHTVRA LQRTVPAAVP AVVFLSGGQS EEEATLNLNA INLVKGKKPW TLSFSFGRAL QQSTLKAWSG KDENVKKAQE
ALLVRAKANS EATLGTYKGD SKLAEGASES LHVEDYKY*