GBrowse Details

Vigan.03G137000.01

Basic Information:
Name: Vigan.03G137000.01
Multiple alignment
Variant Information
Position: Chr03:15814464..15818027 (- strand)
Length: 3564
Functional Information:
Description: Similar to hydroxyacylglutathione hydrolase cytoplasmic-like. [XP_004490514.1, Cicer arietinum]
GO: Biological Process: glutathione biosynthetic process (GO:0006750)
Molecular Function: hydroxyacylglutathione hydrolase activity (GO:0004416)
Molecular Function: zinc ion binding (GO:0008270)
Molecular Function: hydrolase activity (GO:0016787)
InterPro: Beta-lactamase-like (IPR001279)
Hydroxyacylglutathione hydrolase (IPR017782)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:101.53,76.15,38.67,42.74,51.93,52.64,64.48,32.74
Arabidopsis thaliana homolog: AT3G10850.1
Automatic updates:
Name: NM_001248436 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527131 (LOC100527131), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:15814464..15814639 (- strand)
Length: 176
Type: three_prime_UTR
Position: Chr03:15814640..15814714 (- strand)
Length: 75
Type: CDS
Position: Chr03:15814973..15815149 (- strand)
Length: 177
Type: CDS
Position: Chr03:15816089..15816202 (- strand)
Length: 114
Type: CDS
Position: Chr03:15816416..15816494 (- strand)
Length: 79
Type: CDS
Position: Chr03:15817336..15817497 (- strand)
Length: 162
Type: CDS
Position: Chr03:15817580..15817702 (- strand)
Length: 123
Type: CDS
Position: Chr03:15817780..15817826 (- strand)
Length: 47
Type: CDS
Position: Chr03:15817827..15818027 (- strand)
Length: 201
Type: five_prime_UTR


>Vigan.03G137000.01
CAATAAGGTT CATGTGATAT CTTTAACACA ATCGTTCTAA CAAGAGTCCT AATCAATAAA ATTGAATTCC ATTGATTTTA
TGATAAAGTA TATATATAAA CATTATGGAA ATGAAAATTT TAGTCCATTT ATAAATCCGT CGCCGCTAGA TACTCGAAAG
GAGTCGAATT TTGGAAGAGT GTTTGAATCG GAAAGGGAAA GATGAAAATC CAACACATAC CATGTCTCGA AGACAATTAT
TCTTATCTGA TCGTCGATGA GAGCACCAAG GAAGCCGCGG CGGTGGACCC AGTCGAGCCG GAGAAGATTC TCGAAGCTGC
CAACTCGTAT GGTGTCACTC TCAAACTCGT CCTCACCACC CACCATCACT GGGATCATGC TGGTGGAAAC GAGAAGATAA
AACAACTGGT GCCTGGAATC AAGGTCTATG GTGGTTCCAT CGATAACGTG AAGGGTTGCA CCGACAAGGT TGAAAACGGT
GATAAGGTCT CCCTTGGAGC TGACGTCACT ATATTGGCCC TTCATACACC TTGTCACACA AAAGGCCACA TAAGTTACTA
TGTTACTGGC AAAGAGGATG AGCATCCGGC TGTTTTTACT GGAGATACAT TGTTTATTGC TAGTTGTGGG AAATTTTTTG
AGGGAACTGC TGAACAGATG TATCAGTCTC TCAATGTAAC ACTAGGTTCA TTGCCAAAGA CAACTCGAGT ATACTGTGGC
CATGAGTATT CAGTGAAGAA CTTGCAATTT GCTCTGACAC TTGAGCCAGA CAATTCGAGG ACACAACAGA AATTAACCTG
GGCTCAGAAT CAGAGACAAG CTGGTCAAGC AACAATTCCC TCAACCATTG AGGATGAGTT GGAGACCAAT CCCTTTATGA
GGGTTGATCT ACCTGAGATC CAGGAGAGGG TGGGCTGTAA GTCACCTGTT GAAGCATTAG GAGAGATAAG GAAGCGGAAA
GACAACTGGA GAGGCTAATG AAACTAGCAT TCTCATTTGT TCATACTTCA ATTTCCTGTT CTGTTTTATA ATATGAATAA
GGCCTTTATG TAGATACTGT AACCGTTTGA TTTACCTGAA ACTGAAATGA GAGTCAGAGG CTTGTCAAGC TAGGGGCACG
GATTCTGATT AGCAATGTCG CCTATATGCA TATT

>Vigan.03G137000.01
ATGAAAATCC AACACATACC ATGTCTCGAA GACAATTATT CTTATCTGAT CGTCGATGAG AGCACCAAGG AAGCCGCGGC
GGTGGACCCA GTCGAGCCGG AGAAGATTCT CGAAGCTGCC AACTCGTATG GTGTCACTCT CAAACTCGTC CTCACCACCC
ACCATCACTG GGATCATGCT GGTGGAAACG AGAAGATAAA ACAACTGGTG CCTGGAATCA AGGTCTATGG TGGTTCCATC
GATAACGTGA AGGGTTGCAC CGACAAGGTT GAAAACGGTG ATAAGGTCTC CCTTGGAGCT GACGTCACTA TATTGGCCCT
TCATACACCT TGTCACACAA AAGGCCACAT AAGTTACTAT GTTACTGGCA AAGAGGATGA GCATCCGGCT GTTTTTACTG
GAGATACATT GTTTATTGCT AGTTGTGGGA AATTTTTTGA GGGAACTGCT GAACAGATGT ATCAGTCTCT CAATGTAACA
CTAGGTTCAT TGCCAAAGAC AACTCGAGTA TACTGTGGCC ATGAGTATTC AGTGAAGAAC TTGCAATTTG CTCTGACACT
TGAGCCAGAC AATTCGAGGA CACAACAGAA ATTAACCTGG GCTCAGAATC AGAGACAAGC TGGTCAAGCA ACAATTCCCT
CAACCATTGA GGATGAGTTG GAGACCAATC CCTTTATGAG GGTTGATCTA CCTGAGATCC AGGAGAGGGT GGGCTGTAAG
TCACCTGTTG AAGCATTAGG AGAGATAAGG AAGCGGAAAG ACAACTGGAG AGGCTAA

>Vigan.03G137000.01
MKIQHIPCLE DNYSYLIVDE STKEAAAVDP VEPEKILEAA NSYGVTLKLV LTTHHHWDHA GGNEKIKQLV PGIKVYGGSI
DNVKGCTDKV ENGDKVSLGA DVTILALHTP CHTKGHISYY VTGKEDEHPA VFTGDTLFIA SCGKFFEGTA EQMYQSLNVT
LGSLPKTTRV YCGHEYSVKN LQFALTLEPD NSRTQQKLTW AQNQRQAGQA TIPSTIEDEL ETNPFMRVDL PEIQERVGCK
SPVEALGEIR KRKDNWRG*