GBrowse Details

Vigan.03G181600.01

Basic Information:
Name: Vigan.03G181600.01
Multiple alignment
Variant Information
Position: Chr03:27447699..27449970 (+ strand)
Length: 2272
Functional Information:
Description: Similar to uncharacterized protein. [C6T2F6, Glycine max]
InterPro: Serine hydrolase FSH (IPR005645)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.86,2.14,9.07,13.90,11.79,7.20,14.01,10.43
Arabidopsis thaliana homolog: AT4G24380.1
Automatic updates:
Name: NM_001250762 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500670 (LOC100500670), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:27447699..27447933 (+ strand)
Length: 235
Type: five_prime_UTR
Position: Chr03:27447934..27448149 (+ strand)
Length: 216
Type: CDS
Position: Chr03:27448330..27448428 (+ strand)
Length: 99
Type: CDS
Position: Chr03:27448574..27448615 (+ strand)
Length: 42
Type: CDS
Position: Chr03:27448721..27448850 (+ strand)
Length: 130
Type: CDS
Position: Chr03:27449319..27449420 (+ strand)
Length: 102
Type: CDS
Position: Chr03:27449756..27449820 (+ strand)
Length: 65
Type: CDS
Position: Chr03:27449821..27449970 (+ strand)
Length: 150
Type: three_prime_UTR


>Vigan.03G181600.01
GAGGAGGTCC ACGCGACGTT GAATTCAATT GAAGAAACAC GCAAAAAAAA AAAAAAAAAA AGAAAGAAAG CAGAGCCTCT
GACTCCTATA AATAGGTGTC TCCGCCACCA AGTACAACAA CATATCCATA CGAACATATT CTTCTCCTGC GGCCAACCAA
CCCTTCAAAT TAACTCCGTT CAATCCTTGA ATTCTGTTAT TCCGTTAGGG TTGGTGACAG AAGGAAAAGA AAAAGATGGG
AAGCGATGGC GTGAGGAAAC CAAGATTATT GTGCCTTCAT GGGTTTCGAA CAAGCGGAGA AATACTGAAA ACGCAGTTAC
ATAAGTGGCC ACAATCCGTT CTCGACAACC TTGATCTTGT TTTTGTGGAT GCTCCTTTTC CTTGCCAAGG CAAATCCGAC
GTCGAAGGCA TTTTTGATCC TCCTTACTAC GAGTGGTTCC AGTTCAACAA GGAATTTACA GAGTACACCA ACTTTGACGA
GTGCCTTAAG TACATTGAGG ACTGCATGAT CAAGCACGGA CCTATTGATG GGCTTCTGGG TTTCTCACAG GGAGCAATAT
TATCAGCTGC GCTGCCAGGT CTTCAGGAGA AGGGTGTGGC ACTGACGAAG GTTCCCAAGG TGAAATTCGT TGTTATTGTA
GGAGGGGCAA AGTTTAGGTC ACCGTCTGTG GTGGACAAAG CATATTCTTC TCCCATTAGC TGTCCCTCTC TTCATTTTCT
AGGTGAAGTG GATTTTTTGA AACAATATGG AATGGAACTA CTAGAATCCT GTGTTGAACC CGTGGTGATT CACCACCCCA
AAGGACACAC AATACCAAGA TTAGATGATA AGAGCGTGAA GACCGTGATG GATTTCATCG AAAGGATTAA GAAAGACGTC
TCAAAATAAG ACATGAGTTT AGACAACGAG CCATTGCTTC AAAATGATTT TTAAAATTGA TCTTCATTTT AACATCAAGT
AATAGCATTA GTACTCGCAC TTTTATACAA TTTTGTTACT GGTTTATAAA GGGTCATATT TCAGAGGCTC TAAGCCAAT

>Vigan.03G181600.01
ATGGGAAGCG ATGGCGTGAG GAAACCAAGA TTATTGTGCC TTCATGGGTT TCGAACAAGC GGAGAAATAC TGAAAACGCA
GTTACATAAG TGGCCACAAT CCGTTCTCGA CAACCTTGAT CTTGTTTTTG TGGATGCTCC TTTTCCTTGC CAAGGCAAAT
CCGACGTCGA AGGCATTTTT GATCCTCCTT ACTACGAGTG GTTCCAGTTC AACAAGGAAT TTACAGAGTA CACCAACTTT
GACGAGTGCC TTAAGTACAT TGAGGACTGC ATGATCAAGC ACGGACCTAT TGATGGGCTT CTGGGTTTCT CACAGGGAGC
AATATTATCA GCTGCGCTGC CAGGTCTTCA GGAGAAGGGT GTGGCACTGA CGAAGGTTCC CAAGGTGAAA TTCGTTGTTA
TTGTAGGAGG GGCAAAGTTT AGGTCACCGT CTGTGGTGGA CAAAGCATAT TCTTCTCCCA TTAGCTGTCC CTCTCTTCAT
TTTCTAGGTG AAGTGGATTT TTTGAAACAA TATGGAATGG AACTACTAGA ATCCTGTGTT GAACCCGTGG TGATTCACCA
CCCCAAAGGA CACACAATAC CAAGATTAGA TGATAAGAGC GTGAAGACCG TGATGGATTT CATCGAAAGG ATTAAGAAAG
ACGTCTCAAA ATAA

>Vigan.03G181600.01
MGSDGVRKPR LLCLHGFRTS GEILKTQLHK WPQSVLDNLD LVFVDAPFPC QGKSDVEGIF DPPYYEWFQF NKEFTEYTNF
DECLKYIEDC MIKHGPIDGL LGFSQGAILS AALPGLQEKG VALTKVPKVK FVVIVGGAKF RSPSVVDKAY SSPISCPSLH
FLGEVDFLKQ YGMELLESCV EPVVIHHPKG HTIPRLDDKS VKTVMDFIER IKKDVSK*