GBrowse Details

Vigan.03G183100.01

Basic Information:
Name: Vigan.03G183100.01
Multiple alignment
Variant Information
Position: Chr03:27725824..27727805 (- strand)
Length: 1982
Functional Information:
Description: Similar to 1-phosphatidylinositol 3-phosphate 5-kinase-like. [XP_006472514.1, Citrus sinensis]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:9.02,0.37,5.85,24.93,5.27,4.73,5.52,7.56
Automatic updates:
Name: NM_001248933 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100305727 (LOC100305727), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:27725824..27726769 (- strand)
Length: 946
Type: three_prime_UTR
Position: Chr03:27726770..27727250 (- strand)
Length: 481
Type: CDS
Position: Chr03:27727495..27727613 (- strand)
Length: 119
Type: CDS
Position: Chr03:27727614..27727805 (- strand)
Length: 192
Type: five_prime_UTR


>Vigan.03G183100.01
TAAATACAAC CCAACACAAC AAGCTTCACA AACACGGTCA CACGGAAACT AAGTCCATGT GTTTTATTTA TATGGACTTT
GTTTTGTCAT TTGTGGGTCT CCTCGCCTTT TCTTCTGCGG CCATACACCC ATAGCTATTC ATTCCTCAAT TATCAATATC
TTCTCTCTCT CAATGAAAAA CACCACCAAA ACATGACAAC CAAAGGAACA TCTCACTCTC AACCCAATAC AGAGTGTTGC
ATGTGTGGGG ATCTTGGTTT CTCTGATCAG CTTTTTCATT GCAAAGTCTG CCAATTCAGA TCTCAGCACA GATACTGCAG
CAATCTGTAC CCCGAGAAAG AGTCTGTTGG AACCTGCAAT TGGTGTTTGA GTCAGAGAGA GGACACCAAA GAGAAGTCAA
CCAATTCTTC GAATTCCTCC TCGTCAATTT GGAACAACGA TGGTGAGAGC AGGATCAAGA AAATAAAGAA TGGTGGCAGC
AACAACAGTG CTAAAAACAT TGGGTGGAAG AAGGGAGTTA AAGGGAGTGG TATCCTTCAT CTCCAAATTC AGAAACCCAT
TAAGAAACCA AAGTCACCGG AGTCATCAAG ATCACCATCA GCCTCCACAT CCCCCCAAAA ATCTTCACCG GTTCTGGTTT
CAACCCGTAA GAGAATAGTC ACCAACGGCG CCTTGGAAGA GAGACTGAGG AGGACCAGGT CAGAAGATAT CGCAAAGTCG
AGTGGTGCCA CCAAACAGGT CTTCAGGAAT AAGGTCAGAA GGTACAAGCT TTTGGAAGAA GTTTCTAGTT AAAATAAACA
AAATAATAAT AATAATAACA ACGTCAACAA CAAGAAGGCT TAGAATGAAG AGAGTTATGT GAGAGATGAT GAACCAGTAC
ACAACAAAGA AAAAGAAGGT CATGGGTTTT CGTGCCTTTT GTGTTTTTTC CTTCGAAGTT TTGTCCCAAT ACATGTACAG
CACAATGGTG AACTAATGAA TGAGCAAAAC GTGTTTTAGA GCTTAGACTC AGTTGTCATT TCCTTTTTTC CATTTTCAGA
ATATATGAAT TCAATCTGTC AATTGATTAC TCAATGCCGT TAGAAGAAGA GTGCTCTAAT TGCATATATA AAAAGTATTA
GGGGTGAGGT AATGAAGTTG ATAATTTGCT TAGTTTTAGG TTTAGATCTT GATATTGTAG CAGAAAATCA CAGACCCTTT
TTCCACAGTG GCGTAAAACA TGATGCTTAA TTAGCGTTTT GTTTTCCAAC TTTGATGTGA ATGAGATTAA GGTGATTGAA
AGAGATAAAA GACCCTTGAG GTTGAAGTCA TTAACCGTTA AGTGAGTGAT GATAGCCACG CGTCTTGCAT GCCAAAAGTC
TATGGATTGG AGAGAGCGTT TCCAAAAGTT TGCTAGAAAT TTCTTGGTAA CATCGGCACA CGCTTTGAAG TGGGGTTTGG
TCCTTGACAA AGAATCAAGT AACACAGTAC CAGACAAAGC TTGACAATGG GGTCAACTGC ACATGGAAAT GAGTTTCTTA
TATCCATGCA GTCATGAATA AGCACCGTTA AAGGAATGAA CATCATACCA TACATGTTCT TATCTGGAAT ACATACTTTT
GAGTTAGATT TATAGATAAA ATATGAGTCA TTGCATAATT AATTGCATGA ATTGTGAAGT TTTTCTTGGG AGTGAGTTGT
CAACTAGTTT ACAACCAAAA ACTGCACAAC ATTATGAATT TAAGAATGTT TTTATTTA

>Vigan.03G183100.01
ATGACAACCA AAGGAACATC TCACTCTCAA CCCAATACAG AGTGTTGCAT GTGTGGGGAT CTTGGTTTCT CTGATCAGCT
TTTTCATTGC AAAGTCTGCC AATTCAGATC TCAGCACAGA TACTGCAGCA ATCTGTACCC CGAGAAAGAG TCTGTTGGAA
CCTGCAATTG GTGTTTGAGT CAGAGAGAGG ACACCAAAGA GAAGTCAACC AATTCTTCGA ATTCCTCCTC GTCAATTTGG
AACAACGATG GTGAGAGCAG GATCAAGAAA ATAAAGAATG GTGGCAGCAA CAACAGTGCT AAAAACATTG GGTGGAAGAA
GGGAGTTAAA GGGAGTGGTA TCCTTCATCT CCAAATTCAG AAACCCATTA AGAAACCAAA GTCACCGGAG TCATCAAGAT
CACCATCAGC CTCCACATCC CCCCAAAAAT CTTCACCGGT TCTGGTTTCA ACCCGTAAGA GAATAGTCAC CAACGGCGCC
TTGGAAGAGA GACTGAGGAG GACCAGGTCA GAAGATATCG CAAAGTCGAG TGGTGCCACC AAACAGGTCT TCAGGAATAA
GGTCAGAAGG TACAAGCTTT TGGAAGAAGT TTCTAGTTAA 

>Vigan.03G183100.01
MTTKGTSHSQ PNTECCMCGD LGFSDQLFHC KVCQFRSQHR YCSNLYPEKE SVGTCNWCLS QREDTKEKST NSSNSSSSIW
NNDGESRIKK IKNGGSNNSA KNIGWKKGVK GSGILHLQIQ KPIKKPKSPE SSRSPSASTS PQKSSPVLVS TRKRIVTNGA
LEERLRRTRS EDIAKSSGAT KQVFRNKVRR YKLLEEVSS*