GBrowse Details

Vigan.03G185400.01

Basic Information:
Name: Vigan.03G185400.01
Multiple alignment
Variant Information
Position: Chr03:28468957..28471622 (+ strand)
Length: 2666
Functional Information:
Description: Similar to Uncharacterized protein. [G7I281, Medicago truncatula]
InterPro: Early nodulin 93 ENOD93 protein (IPR005050)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:91.97,30.84,60.36,37.81,61.84,59.58,60.35,27.44
Automatic updates:
Name: NM_001248310 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500499 (LOC100500499), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:28468957..28469117 (+ strand)
Length: 161
Type: five_prime_UTR
Position: Chr03:28469118..28469229 (+ strand)
Length: 112
Type: CDS
Position: Chr03:28470054..28470115 (+ strand)
Length: 62
Type: CDS
Position: Chr03:28470504..28470579 (+ strand)
Length: 76
Type: CDS
Position: Chr03:28471122..28471222 (+ strand)
Length: 101
Type: CDS
Position: Chr03:28471223..28471622 (+ strand)
Length: 400
Type: three_prime_UTR


>Vigan.03G185400.01
ATGACATACG GCAACTCTGA TAGACACGAA CATTCTGCGT ACATACATAT AGTATATTAT AGTATACGGT AATAATAATA
ATTAGCCACC GGGTTTCGGT TCAGAGAACC TGCTACAAAA GAAGAAAAGT TTGTTGAAGA GAGCCAACCA CAACAAAAAC
AATGGGTATT CCGTCGGAAC TTCGGGAAAT CTTCTTACCC AACAAAAAAG ATGTCTTTAT TGCTTCTCCC GCAGAGGATA
GGAGGGTTTT GAGGACCAAA CAATGCACTG ATGAAGGTGT GCATGCTGGA TTCAGGGCTG CTTGCGTTGC TTGTGTTGCC
AGTGCTGTGC CTACTTTGAC TGCAGTTCGT GTGATCCCAT GGGCAAAGGC AAACCTCAAT TATACTGCTC AGGCACTCAT
AATATCAGCT GCATCCATCG CTGCATACTT CATCACTGCT GATAAAACTA TCTTGGAGTG TGCAAGGAAA AATGCCCAGC
TTGAAGATGC TTTGGTACAC AATCAACAAT AGACGTTTCT TACGAACTGC AAGAACCCGT CGTTGTTATA CACTCAACAG
GACTATTGCA AAGGCGTATA TTATTAAAGA AAATGTTTTT GTCTTGTGAA TTTGACAGTC ATTTGAAATT GCAACTCACT
TGCGGCTTCA GAAGTAAAAA TGTTAAGCTA TGTTGACTTT TGTTGTTTTT CCATCTTTCG TTAAATAAAT TTAATGCATA
AACTTCGAAG TTCCATGAGC TGTTCCACAA TTAAGCCTGA TTCTAATTTC ATGTTATAAC CACCCTGTTC CACAAATTCA
TTGCGCGCCT TTGTCTGTCT CCTGTGGTTT ATAGCTTCAC ATTTATACTG ATGTTTTAAA AAATTAGCGT AGCCACCAGA
GAGGCAAAAA TCCTTCTTAC CAAACAAACC TA

>Vigan.03G185400.01
ATGGGTATTC CGTCGGAACT TCGGGAAATC TTCTTACCCA ACAAAAAAGA TGTCTTTATT GCTTCTCCCG CAGAGGATAG
GAGGGTTTTG AGGACCAAAC AATGCACTGA TGAAGGTGTG CATGCTGGAT TCAGGGCTGC TTGCGTTGCT TGTGTTGCCA
GTGCTGTGCC TACTTTGACT GCAGTTCGTG TGATCCCATG GGCAAAGGCA AACCTCAATT ATACTGCTCA GGCACTCATA
ATATCAGCTG CATCCATCGC TGCATACTTC ATCACTGCTG ATAAAACTAT CTTGGAGTGT GCAAGGAAAA ATGCCCAGCT
TGAAGATGCT TTGGTACACA ATCAACAATA G

>Vigan.03G185400.01
MGIPSELREI FLPNKKDVFI ASPAEDRRVL RTKQCTDEGV HAGFRAACVA CVASAVPTLT AVRVIPWAKA NLNYTAQALI
ISAASIAAYF ITADKTILEC ARKNAQLEDA LVHNQQ*