GBrowse Details

Vigan.03G188700.01

Basic Information:
Name: Vigan.03G188700.01
Multiple alignment
Variant Information
Position: Chr03:29254228..29258785 (- strand)
Length: 4558
Functional Information:
Description: Similar to protein. [O49582, Arabidopsis thaliana]
InterPro: Protein of unknown function DUF599 (IPR006747)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.05,0.00,10.68,2.68,1.75,12.00,27.55,15.11
Automatic updates:
Name: BT092681 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-22A8 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:29254228..29254583 (- strand)
Length: 356
Type: three_prime_UTR
Position: Chr03:29254584..29255114 (- strand)
Length: 531
Type: CDS
Position: Chr03:29258470..29258637 (- strand)
Length: 168
Type: CDS
Position: Chr03:29258638..29258785 (- strand)
Length: 148
Type: five_prime_UTR


>Vigan.03G188700.01
GATCAAAGAA GAGTGACACC AATCTTATAC GCAAATTGTT CTCTCTCATA AAACAGTTCA GAAAGGAGGA AGAGAAGTTA
AGCAATAACA ATATTCCACT CTACCAAGTT ATCTCTATCT CTCTTGAAAC CTTGAAATCA AGATCATCAT GGAATGGAGG
AAGTGCTACT TGGATGTGAT ATTGGTGCCT CTTGGTTTTC TTACAAGCAT TGGCTACCAT TTCTGGCTAT GGCATAAAGT
TCGAACTCAG CCACACACAA CCATCATTGG CATCAATGCT AGTGGTCGTA GAAATTGGGT TAATGCCATG ATGAAGGACA
ATGAGAAGAA AAACATCCTG GCCGTACAAT CACTGAGGAA CACAATCATG GGTGCTACTC TAATGGCGAC AACATCCATT
CTCCTCTGCT CAGGCCTGGC AGCAGTGATA AGCAGCACGT ACAGTGTGAA AAAACCACTG AGTGATGCTG TGTATGGGGC
ACACGGGGAG TTCATGGTGG CCCTCAAGTA TGTGACTCTC CTCACAATTT TCCTCTTCTC ATTCTTCTGC CACTCTCTCT
CCATAAGGTT CATAAACCAA GTGAACATCC TAATCAACAC CCCTCAGGAC CCCATGTCCC TTGTCACCCC ACAGTACATC
AATGAGATCC TCGAGAAAGG CTTCATTCTC AACACTGTTG GGAACAGACT CTTCTATGCA GGTCTCCCTC TCCTGCTCTG
GATCTTTGGC CCTGTCTTGG TCTTCCTCTG CTCCCTCACC ATGGTTCCAG TGCTCTACAA TCTTGACTTT GTCTTCACCA
CTGCCAAGGG AAAGGTCGAG GCTAACCAAA ACAGGGATTT TGAATGAAAT TACTGTGTGC TAATATCTTA TGTGGGGTGA
CTCAATGAGT GACTGAGGAT TGAAGTAGGT CTTTTTCCTC ATTTTGATAA TAAAAAATTA ATGTGCATGT ATGCTCTCCC
CACTGGAATG AGCTTTTGGG TGATGATGAT GATGATCCAT TAGTTTCTAT AAGTTAGGTT GTGAACAAAA AGCATACCTT
GTGCATAGTT TTGATTTGCT TGGCATGCAC TATGGTTGGA TGAATAAAAT AAAAGGTTGC CATGCTTTTC TCTACCCCCC
AACTAATTAC AATGGTGCTA ATTAGTTTAT ATTCTGAATT AATAAAACAG TTCTTTATCC AATTATTAAG TTTCATGTTA
AAA

>Vigan.03G188700.01
ATGGAATGGA GGAAGTGCTA CTTGGATGTG ATATTGGTGC CTCTTGGTTT TCTTACAAGC ATTGGCTACC ATTTCTGGCT
ATGGCATAAA GTTCGAACTC AGCCACACAC AACCATCATT GGCATCAATG CTAGTGGTCG TAGAAATTGG GTTAATGCCA
TGATGAAGGA CAATGAGAAG AAAAACATCC TGGCCGTACA ATCACTGAGG AACACAATCA TGGGTGCTAC TCTAATGGCG
ACAACATCCA TTCTCCTCTG CTCAGGCCTG GCAGCAGTGA TAAGCAGCAC GTACAGTGTG AAAAAACCAC TGAGTGATGC
TGTGTATGGG GCACACGGGG AGTTCATGGT GGCCCTCAAG TATGTGACTC TCCTCACAAT TTTCCTCTTC TCATTCTTCT
GCCACTCTCT CTCCATAAGG TTCATAAACC AAGTGAACAT CCTAATCAAC ACCCCTCAGG ACCCCATGTC CCTTGTCACC
CCACAGTACA TCAATGAGAT CCTCGAGAAA GGCTTCATTC TCAACACTGT TGGGAACAGA CTCTTCTATG CAGGTCTCCC
TCTCCTGCTC TGGATCTTTG GCCCTGTCTT GGTCTTCCTC TGCTCCCTCA CCATGGTTCC AGTGCTCTAC AATCTTGACT
TTGTCTTCAC CACTGCCAAG GGAAAGGTCG AGGCTAACCA AAACAGGGAT TTTGAATGA

>Vigan.03G188700.01
MEWRKCYLDV ILVPLGFLTS IGYHFWLWHK VRTQPHTTII GINASGRRNW VNAMMKDNEK KNILAVQSLR NTIMGATLMA
TTSILLCSGL AAVISSTYSV KKPLSDAVYG AHGEFMVALK YVTLLTIFLF SFFCHSLSIR FINQVNILIN TPQDPMSLVT
PQYINEILEK GFILNTVGNR LFYAGLPLLL WIFGPVLVFL CSLTMVPVLY NLDFVFTTAK GKVEANQNRD FE*