GBrowse Details

Vigan.03G189400.01

Basic Information:
Name: Vigan.03G189400.01
Multiple alignment
Variant Information
Position: Chr03:29347879..29359413 (+ strand)
Length: 11535
Functional Information:
Description: Similar to Uncharacterized protein. [I1MWC4, Glycine max]
GO: Biological Process: metabolic process (GO:0008152)
Cellular Component: cytoplasm (GO:0005737)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: kinase activity (GO:0016301)
Molecular Function: phosphotransferase activity, alcohol group as acceptor (GO:0016773)
InterPro: GHMP kinase N-terminal domain (IPR006204)
Mevalonate/galactokinase (IPR006206)
Galactokinase, glycosyltransferase (IPR012369)
Ribosomal protein S5 domain 2-type fold, subgroup (IPR014721)
Galactokinase galactose-binding domain (IPR019539)
Ribosomal protein S5 domain 2-type fold (IPR020568)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:5.90,5.77,14.31,5.61,3.95,13.22,5.12,7.53
Arabidopsis thaliana homolog: AT3G42850.1, AT4G16130.1
Structure :
Position: Chr03:29347879..29347934 (+ strand)
Length: 56
Type: five_prime_UTR
Position: Chr03:29347935..29348042 (+ strand)
Length: 108
Type: CDS
Position: Chr03:29348272..29348379 (+ strand)
Length: 108
Type: CDS
Position: Chr03:29348796..29348864 (+ strand)
Length: 69
Type: CDS
Position: Chr03:29348978..29349061 (+ strand)
Length: 84
Type: CDS
Position: Chr03:29349636..29349712 (+ strand)
Length: 77
Type: CDS
Position: Chr03:29350079..29350145 (+ strand)
Length: 67
Type: CDS
Position: Chr03:29350905..29350962 (+ strand)
Length: 58
Type: CDS
Position: Chr03:29351075..29351142 (+ strand)
Length: 68
Type: CDS
Position: Chr03:29351223..29351285 (+ strand)
Length: 63
Type: CDS
Position: Chr03:29352003..29352056 (+ strand)
Length: 54
Type: CDS
Position: Chr03:29352155..29352257 (+ strand)
Length: 103
Type: CDS
Position: Chr03:29352333..29352442 (+ strand)
Length: 110
Type: CDS
Position: Chr03:29352550..29352669 (+ strand)
Length: 120
Type: CDS
Position: Chr03:29353453..29353509 (+ strand)
Length: 57
Type: CDS
Position: Chr03:29353652..29353818 (+ strand)
Length: 167
Type: CDS
Position: Chr03:29353922..29354063 (+ strand)
Length: 142
Type: CDS
Position: Chr03:29354271..29354354 (+ strand)
Length: 84
Type: CDS
Position: Chr03:29354712..29354837 (+ strand)
Length: 126
Type: CDS
Position: Chr03:29355041..29355171 (+ strand)
Length: 131
Type: CDS
Position: Chr03:29355255..29355336 (+ strand)
Length: 82
Type: CDS
Position: Chr03:29355598..29355685 (+ strand)
Length: 88
Type: CDS
Position: Chr03:29355964..29356007 (+ strand)
Length: 44
Type: CDS
Position: Chr03:29356124..29356219 (+ strand)
Length: 96
Type: CDS
Position: Chr03:29356303..29356379 (+ strand)
Length: 77
Type: CDS
Position: Chr03:29356819..29357016 (+ strand)
Length: 198
Type: CDS
Position: Chr03:29357312..29357477 (+ strand)
Length: 166
Type: CDS
Position: Chr03:29357878..29357949 (+ strand)
Length: 72
Type: CDS
Position: Chr03:29358306..29358509 (+ strand)
Length: 204
Type: CDS
Position: Chr03:29358985..29359152 (+ strand)
Length: 168
Type: CDS
Position: Chr03:29359153..29359413 (+ strand)
Length: 261
Type: three_prime_UTR


>Vigan.03G189400.01
ATACAGTACC ATCATTCTCT TGTTGGAGAC TTTGAAAGAA GTTGAATCAC TGCAAAATGA GGATCGAGCA AGAGAGTGAC
GGAGTCTCAG CTTCCACAAA GCACCTAGTA TTTGCGTATT ATGTCACTGG TCATGGTTTT GGCCATGCCA CTCGAGTTAC
TGAGGTGGTG CGGCATTTGA TTCTCGCGGG GCATGATGTG CACGTCGTCA CTGGTGCTCC TGATTTTGTT TTCACCACTG
AAATACAGTC TCCTCGCTTG TTCATTCGCA AAGTGCTTTT GGACTGTGGA GCTGTTCAGG CAGATGCGTT GACCGTTGAT
CGCCTTGCCT CTTTGGCTAA GTATTCTGAA ACAGCAGTGA AGCCCCGTGC AAAAATCTTG GCTCAAGAAT CTGAGTGGTT
GAACTCTATT AAAGCTGACT TAGTGGTCTC GGATGTTGTC CCAGTTGCAT GTCGAGCAGC AGCGGATGCA GGCATTCGCT
CTGTTTGTGT GACCAATTTC AGTTGGGACT TCATCTATGC AGAGTATGTC ATGGCTGCTG GACTAAATCA TCGTTCAATA
GTTTGGGAGA TAGCGGAGGA CTATTCACAT TGCGAGTTCC TTATTCGCCT CCCAGGATAT TGCCCAATGC CCGCTTTTCG
GGATATTTTT GATGTCCCTC TCGTTGTGAG GAGGTTGCAC AAATCTGCAA AAGAGGTGAG GAAGGAACTT GGGGTAACTG
ATGATGTGAA ACTAGTTATT CTAAACTTTG GTGGGCAGCC ATCAGGATTG AAGCTAAAGG AGGAATTCTT ACCGCCTGGC
TGGTTGTGCC TGGTTTGTGG TGCTTCTAAA AGTGATGACC TTCCACCTAA CTTCATAAAA CTTGCTCAAG ATGCGTATAC
ACCTGACATT ATTGCAGCAT CTGACTGTAT GCTTGGGAAA ATTGGATATG GCACAGTTAG TGAGGCCTTG GCATACAAGT
GCCCTTTTGT CTTTGTACGA AGAGATTATT TCAATGAAGA ACCTTTTTTG AGAAATATGC TTGAGCATTA TCAATGTGGT
GTTGAAATGA TTAGAAGGGA TTTACTGACT GGTCATTGGA GACCTTATCT TCAACGAGTG TTAAGTTTGA AACCCAGCTA
TGAAGGAGGC ATTAATGGTG GTGAGGTAGC AGCACGCATC CTGCAGGAGA CAGCTTTAGG AAAAAATTAT GCATCAGATA
AGCTTAGTGG TGCTAGAAGG TTGCGTGATG CCATAGTTCT TGGGTATCAA CTTCAAAGGG CCTCTGGCCG AGACATTACA
ATCCCAGAAT GGTATACAAC TGCAGAAGAC CAACTTGGGC CCACGACACC TGGTTCCCCT GTCGATGATG GAAGCTTAGC
ATTGAGCCCG GACTTTGCAA ACTTTGACAT TCTTCATGGA GATGTTCAAG GACTTCCGGA TACTATGGCA TTCTTACATA
GCCTGTCTGA ATTAGAGGAG AAGCACAAAA GGCGGGAGCG TAAGGCTGCA GCCAGTCTCT TCAACTGGCA GGAGGACATT
TTTGTTACGA GAGCTCCTGG AAGATTAGAT GTTATGGGTG GTATTGCTGA CTATTCTGGA AGTCTTGTGC TGCAGATGCC
AATTAAGGAA GCCTGTCATG TTGCTTTGCA AAGAATCCAT CCAAGTAAAC ATAGGCTGTG GAAACATGCT GAAGCTCGGC
AGAATGACAA AGGAGGAAAT CCAACTGCTG TCTTGCAAAT CGTATCATTT GGATCAGAAT TGAGCAATCG AGGCCCAACA
TTTGACATGG ATTTGTCTGA TTTTATGGAA GAAGGCAAAC CAATCACATA TGAGAAAGCA AAGAAATACT TTGCTCAAGA
TCCTTCCCAA AAGTGGGCTG CATATGTAGC AGGTTCTATT TTGGTCTTAA TGACTGAATT GGGTGTTCGA TTTGAAGATA
GTATAAGCAT GCTGGTTTCA TCTGCAGTTC CAGAAGGGAA AGGTGTATCA TCTTCTGCCT CTGTGGAGGT TGCTAGTATG
TCTGCTATTG CAGCTGCTCA TGGGTTAAAT ATCAGCCCAA GGGAACTGGC CATACTCTGC CAGAAGGTGG AAAACCACAT
TGTAGGAGCT CCTTGCGGAG TCATGGACCA GATGGCTTCA GCATGCGGTG AAGCCAACAA ACTTCTTGCT ATGGTTTGCC
AGCCTGCGGA AATTATTGGT CTTGTTGACA TTCCCAGCCA TATCCGTTTC TGGGGAATTG ATTCTGGAAT AAGACACAGC
GTTGGAGGTG CAGACTATGG TTCTGTTAGA ATTGGAACCT TTATGGGTAT GAAGATGATA AAGGCCAAGG CTTCTGAGGA
ATTGTCCAAG AGTTGTGCTG CTAATGGGTT GAACTATGAT GAAGTGGAAC AAGATGATCT AGAACTACTC AAACAAGAAG
CCTCCTTAGA TTACTTATGT AATTTGCCAC CTCATAGATT TGAGGCTCTT TATGCTAAGT CTCTTCCAGA GTCCATTGTT
GGTGAGGCAT TTGTAGAGCA ACATGAAAAT CATAATGATC CTGTCACTAT TATTGATCAG AAGCGTACGT ACGTAGTTAA
AGCTCCCACA ACGCATCCAA TCTATGAAAA CTTCCGAGTC AAGACCTTCA AGGCACTTCT ATCATCTGCA TCTTCAACCT
ATCAGCTTGC ATCCTTAGGA GAACTGCTAT ATCAGTGCCA CTACAGCTAC AGTGCTTGTG GACTTGGCTC TGATGGAACA
GATAGGCTTG TACACTTAGT GCAAGAGTTG CAGCACAGTG CAGAATCTAA ATCTGAAGGT GGGATTTTAT ATGGAGCCAA
GATAACTGGT GGTGGTTCAG GCGGAACAGT TTGTGTAATT GGTAGAAACT GTCTCAAGAG CAGTGAACAC ATTTTTGAGG
TTCAGCAGAG ATACAAGAAA GCTACTGGTT ATATGCCTTT TCTTTTTGAG GGTTCATCAC CAGGTGCTGG AAAATTTGGG
TACCTGAAAA TACGCCGTCG AGCTGCCCCA AAAAAGGCTA ATACGGGTGA TGATGATGCT GCAGTCACAG TGGAAAATAG
CAGTTGATCA TGGCTTATAG TCCATTACCT TAGGAATTCT TACCTTCACT ATCTTTCACG GAATATGTAC AGTTTCGTTA
CATTTTGAAC CATTTTTATC TATTATTTAA CATTTGCACT TTCTTATAAT GATTTTTTTT ACTAAAATTT ATATGGCCGT
AAATAGTGAA CAAAAAACAT TATTTGAACT TTTGTTTGGG TGTTTCCTGA TGTACCTTGT ATTCCCGCGT ATCAAAATTA
TTTGAAGCCA AATGGAAATT AACATAAA

>Vigan.03G189400.01
ATGAGGATCG AGCAAGAGAG TGACGGAGTC TCAGCTTCCA CAAAGCACCT AGTATTTGCG TATTATGTCA CTGGTCATGG
TTTTGGCCAT GCCACTCGAG TTACTGAGGT GGTGCGGCAT TTGATTCTCG CGGGGCATGA TGTGCACGTC GTCACTGGTG
CTCCTGATTT TGTTTTCACC ACTGAAATAC AGTCTCCTCG CTTGTTCATT CGCAAAGTGC TTTTGGACTG TGGAGCTGTT
CAGGCAGATG CGTTGACCGT TGATCGCCTT GCCTCTTTGG CTAAGTATTC TGAAACAGCA GTGAAGCCCC GTGCAAAAAT
CTTGGCTCAA GAATCTGAGT GGTTGAACTC TATTAAAGCT GACTTAGTGG TCTCGGATGT TGTCCCAGTT GCATGTCGAG
CAGCAGCGGA TGCAGGCATT CGCTCTGTTT GTGTGACCAA TTTCAGTTGG GACTTCATCT ATGCAGAGTA TGTCATGGCT
GCTGGACTAA ATCATCGTTC AATAGTTTGG GAGATAGCGG AGGACTATTC ACATTGCGAG TTCCTTATTC GCCTCCCAGG
ATATTGCCCA ATGCCCGCTT TTCGGGATAT TTTTGATGTC CCTCTCGTTG TGAGGAGGTT GCACAAATCT GCAAAAGAGG
TGAGGAAGGA ACTTGGGGTA ACTGATGATG TGAAACTAGT TATTCTAAAC TTTGGTGGGC AGCCATCAGG ATTGAAGCTA
AAGGAGGAAT TCTTACCGCC TGGCTGGTTG TGCCTGGTTT GTGGTGCTTC TAAAAGTGAT GACCTTCCAC CTAACTTCAT
AAAACTTGCT CAAGATGCGT ATACACCTGA CATTATTGCA GCATCTGACT GTATGCTTGG GAAAATTGGA TATGGCACAG
TTAGTGAGGC CTTGGCATAC AAGTGCCCTT TTGTCTTTGT ACGAAGAGAT TATTTCAATG AAGAACCTTT TTTGAGAAAT
ATGCTTGAGC ATTATCAATG TGGTGTTGAA ATGATTAGAA GGGATTTACT GACTGGTCAT TGGAGACCTT ATCTTCAACG
AGTGTTAAGT TTGAAACCCA GCTATGAAGG AGGCATTAAT GGTGGTGAGG TAGCAGCACG CATCCTGCAG GAGACAGCTT
TAGGAAAAAA TTATGCATCA GATAAGCTTA GTGGTGCTAG AAGGTTGCGT GATGCCATAG TTCTTGGGTA TCAACTTCAA
AGGGCCTCTG GCCGAGACAT TACAATCCCA GAATGGTATA CAACTGCAGA AGACCAACTT GGGCCCACGA CACCTGGTTC
CCCTGTCGAT GATGGAAGCT TAGCATTGAG CCCGGACTTT GCAAACTTTG ACATTCTTCA TGGAGATGTT CAAGGACTTC
CGGATACTAT GGCATTCTTA CATAGCCTGT CTGAATTAGA GGAGAAGCAC AAAAGGCGGG AGCGTAAGGC TGCAGCCAGT
CTCTTCAACT GGCAGGAGGA CATTTTTGTT ACGAGAGCTC CTGGAAGATT AGATGTTATG GGTGGTATTG CTGACTATTC
TGGAAGTCTT GTGCTGCAGA TGCCAATTAA GGAAGCCTGT CATGTTGCTT TGCAAAGAAT CCATCCAAGT AAACATAGGC
TGTGGAAACA TGCTGAAGCT CGGCAGAATG ACAAAGGAGG AAATCCAACT GCTGTCTTGC AAATCGTATC ATTTGGATCA
GAATTGAGCA ATCGAGGCCC AACATTTGAC ATGGATTTGT CTGATTTTAT GGAAGAAGGC AAACCAATCA CATATGAGAA
AGCAAAGAAA TACTTTGCTC AAGATCCTTC CCAAAAGTGG GCTGCATATG TAGCAGGTTC TATTTTGGTC TTAATGACTG
AATTGGGTGT TCGATTTGAA GATAGTATAA GCATGCTGGT TTCATCTGCA GTTCCAGAAG GGAAAGGTGT ATCATCTTCT
GCCTCTGTGG AGGTTGCTAG TATGTCTGCT ATTGCAGCTG CTCATGGGTT AAATATCAGC CCAAGGGAAC TGGCCATACT
CTGCCAGAAG GTGGAAAACC ACATTGTAGG AGCTCCTTGC GGAGTCATGG ACCAGATGGC TTCAGCATGC GGTGAAGCCA
ACAAACTTCT TGCTATGGTT TGCCAGCCTG CGGAAATTAT TGGTCTTGTT GACATTCCCA GCCATATCCG TTTCTGGGGA
ATTGATTCTG GAATAAGACA CAGCGTTGGA GGTGCAGACT ATGGTTCTGT TAGAATTGGA ACCTTTATGG GTATGAAGAT
GATAAAGGCC AAGGCTTCTG AGGAATTGTC CAAGAGTTGT GCTGCTAATG GGTTGAACTA TGATGAAGTG GAACAAGATG
ATCTAGAACT ACTCAAACAA GAAGCCTCCT TAGATTACTT ATGTAATTTG CCACCTCATA GATTTGAGGC TCTTTATGCT
AAGTCTCTTC CAGAGTCCAT TGTTGGTGAG GCATTTGTAG AGCAACATGA AAATCATAAT GATCCTGTCA CTATTATTGA
TCAGAAGCGT ACGTACGTAG TTAAAGCTCC CACAACGCAT CCAATCTATG AAAACTTCCG AGTCAAGACC TTCAAGGCAC
TTCTATCATC TGCATCTTCA ACCTATCAGC TTGCATCCTT AGGAGAACTG CTATATCAGT GCCACTACAG CTACAGTGCT
TGTGGACTTG GCTCTGATGG AACAGATAGG CTTGTACACT TAGTGCAAGA GTTGCAGCAC AGTGCAGAAT CTAAATCTGA
AGGTGGGATT TTATATGGAG CCAAGATAAC TGGTGGTGGT TCAGGCGGAA CAGTTTGTGT AATTGGTAGA AACTGTCTCA
AGAGCAGTGA ACACATTTTT GAGGTTCAGC AGAGATACAA GAAAGCTACT GGTTATATGC CTTTTCTTTT TGAGGGTTCA
TCACCAGGTG CTGGAAAATT TGGGTACCTG AAAATACGCC GTCGAGCTGC CCCAAAAAAG GCTAATACGG GTGATGATGA
TGCTGCAGTC ACAGTGGAAA ATAGCAGTTG A

>Vigan.03G189400.01
MRIEQESDGV SASTKHLVFA YYVTGHGFGH ATRVTEVVRH LILAGHDVHV VTGAPDFVFT TEIQSPRLFI RKVLLDCGAV
QADALTVDRL ASLAKYSETA VKPRAKILAQ ESEWLNSIKA DLVVSDVVPV ACRAAADAGI RSVCVTNFSW DFIYAEYVMA
AGLNHRSIVW EIAEDYSHCE FLIRLPGYCP MPAFRDIFDV PLVVRRLHKS AKEVRKELGV TDDVKLVILN FGGQPSGLKL
KEEFLPPGWL CLVCGASKSD DLPPNFIKLA QDAYTPDIIA ASDCMLGKIG YGTVSEALAY KCPFVFVRRD YFNEEPFLRN
MLEHYQCGVE MIRRDLLTGH WRPYLQRVLS LKPSYEGGIN GGEVAARILQ ETALGKNYAS DKLSGARRLR DAIVLGYQLQ
RASGRDITIP EWYTTAEDQL GPTTPGSPVD DGSLALSPDF ANFDILHGDV QGLPDTMAFL HSLSELEEKH KRRERKAAAS
LFNWQEDIFV TRAPGRLDVM GGIADYSGSL VLQMPIKEAC HVALQRIHPS KHRLWKHAEA RQNDKGGNPT AVLQIVSFGS
ELSNRGPTFD MDLSDFMEEG KPITYEKAKK YFAQDPSQKW AAYVAGSILV LMTELGVRFE DSISMLVSSA VPEGKGVSSS
ASVEVASMSA IAAAHGLNIS PRELAILCQK VENHIVGAPC GVMDQMASAC GEANKLLAMV CQPAEIIGLV DIPSHIRFWG
IDSGIRHSVG GADYGSVRIG TFMGMKMIKA KASEELSKSC AANGLNYDEV EQDDLELLKQ EASLDYLCNL PPHRFEALYA
KSLPESIVGE AFVEQHENHN DPVTIIDQKR TYVVKAPTTH PIYENFRVKT FKALLSSASS TYQLASLGEL LYQCHYSYSA
CGLGSDGTDR LVHLVQELQH SAESKSEGGI LYGAKITGGG SGGTVCVIGR NCLKSSEHIF EVQQRYKKAT GYMPFLFEGS
SPGAGKFGYL KIRRRAAPKK ANTGDDDAAV TVENSS*