GBrowse Details

Vigan.03G201800.01

Basic Information:
Name: Vigan.03G201800.01
Multiple alignment
Variant Information
Position: Chr03:32087196..32089885 (+ strand)
Length: 2690
Functional Information:
Description: Similar to protein. [F2E3J7, Hordeum vulgare var. distichum]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:6.31,4.81,13.56,7.61,15.98,16.80,13.65,15.00
Arabidopsis thaliana homolog: AT1G21930.1
Automatic updates:
Name: NM_001250968 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527306 (LOC100527306), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:32087196..32087535 (+ strand)
Length: 340
Type: five_prime_UTR
Position: Chr03:32087536..32087585 (+ strand)
Length: 50
Type: CDS
Position: Chr03:32088548..32088782 (+ strand)
Length: 235
Type: CDS
Position: Chr03:32088783..32089885 (+ strand)
Length: 1103
Type: three_prime_UTR


>Vigan.03G201800.01
AAAAAATTAA AGAATAGAGA TTTAATGTTA GAAAATGTAA CTTTTCTGAA TACTAGACCA TAAAATTTTA TAAAATTTCA
ATTAAAAGTT TTCAAATTTA ATAAAAACTT AAAACTTAAT TAAATTGACG ATAGATATCT TTTGCGAAAA AAATAATGTA
AAGTAAACTG TAATTTTGAT ATATTTGTGA CTGCGTCTGC AAAACTGTAT TTTTTTCTAA TTGGTCCTTC TTAACAGACA
CCTCTCTCTT TGGACACGAC TAGCATTCGA AATCGAAGCA AAGTGAAAGG GCACAGTTTT TATTCCTTTT TGCCTTCTCC
GCTTAAAGTT TCTGCCGAAA ATGGGAAGCG AAGATAATGT GAAGCATCTT GAAGACTGCT CCGTTTCTAA TGCATTAGGC
ACTTGGGTGT TCTCAGTTGC AGGAGCATTG TTGGCTATTC CAGTTGGCAT AAAGCGCAAA TCTCTAGCAC CCCTTGTATT
TTTTGGCACC ACAGGTACTA TGTTGGATAT TATTATGGGG ATCACTGCTT GCGAAAGGGA ACACGCAGAG CGCCAAATGA
AGCTACTTGA AGCGCAAAAT GCTGCTGCCG AAACTTCCTT GGGTGAAACA GAAATTGATT CATAAACCGC TATCTTGAAG
TTGTCAGCAT TGTCAAACTT GTTTGGGCAT GATTGTAACA AACTAAATGC ACTTTTCTGG TGGTCACTAG TCAAATATTC
TTCTACTTGA TGTTTTTTTT ATATCCTTTT ACGGTTTTTC CTCCAGCGGT GTTTAAAAAA GAAGGTGGAT ATGATGGATT
TCCGTGTTAA TTCATAAAGA TTTCAGGAAT GTTTGATCAC AATGTGTTTC TTATACAATG GTAATTAAAA AACGCCATTA
TTAGATCCTT TTTGGGACTT TTGAGGGGCA AGTTGTACAT CGAATAAATG GAGCAGTGAA CTTCTTATTT TGTTTTATCT
AATTCGATTT CTCCTTTCTC ATGAGCTATT GTCACATATA AGATTTGCCA AACTAACATT TTTAGTTTTC CTTTGGGTAC
AAGTCTTGAA GGATGCGTAT GGATAAGTTC TACCCGATTG CCTGTGCACT CGTGCATCTC ATGCTTTTTT CTGTAAAATG
TTTTCAAAGC ATATGTGAAG CTATATTCGA TTGTGCTTTC CATTTATTTA TTTCTCCAAT TTAAAATTTT GTAAGACTCC
AACATAATTT AAACTCATGA AAATATGAAA TTCTTTAGTT CTTATGAAAA TGATTGATGA CAACCCCTTT AGGAACTTTT
CATCCAAAGA CGTATCAAAT TAACACTAAG ACTAAGAAAG GGAAGTTGAA AAAGGACTTT TAAACAAAAG CATCTTTTTT
TTCTAAGTCT TAGAATGTTC TCTTTACCTA AATACATTTA CCTTATTTTG TAGGTCACCA ATAAAGGTGG GAAACCATGT
CTATATACCT TGAAAGACTA GCCAAGCAAA GGAGAACAAA GGAAGCAATG AAGAGTGCAT CTGCTGCCAA CGCTCAGCGC
ACCTGCGTTA CCGCTCAGCG ACAACGGATC GGCTTCTTCC CTTTGAGCAC GTTTTAAATG TGTTTTGCCT GAAACATGCG
ACCCAGCCTA TGTAGCTTCT TTTGCATACC TCTCTGGTAG CTTCATGCAT GTTGTGAATG TATCAGTAGC TTGCTAGGCA
CGCTTCTCTT ACTCTATAAA AGAGAGGTTC TCCTTCTTGT AAATTGAA

>Vigan.03G201800.01
ATGGGAAGCG AAGATAATGT GAAGCATCTT GAAGACTGCT CCGTTTCTAA TGCATTAGGC ACTTGGGTGT TCTCAGTTGC
AGGAGCATTG TTGGCTATTC CAGTTGGCAT AAAGCGCAAA TCTCTAGCAC CCCTTGTATT TTTTGGCACC ACAGGTACTA
TGTTGGATAT TATTATGGGG ATCACTGCTT GCGAAAGGGA ACACGCAGAG CGCCAAATGA AGCTACTTGA AGCGCAAAAT
GCTGCTGCCG AAACTTCCTT GGGTGAAACA GAAATTGATT CATAA

>Vigan.03G201800.01
MGSEDNVKHL EDCSVSNALG TWVFSVAGAL LAIPVGIKRK SLAPLVFFGT TGTMLDIIMG ITACEREHAE RQMKLLEAQN
AAAETSLGET EIDS*