GBrowse Details

Vigan.03G202300.01

Basic Information:
Name: Vigan.03G202300.01
Multiple alignment
Variant Information
Position: Chr03:32141510..32146725 (+ strand)
Length: 5216
Functional Information:
Description: Similar to Uncharacterized protein. [Q0EDG6, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706)
InterPro: Oxoglutarate/iron-dependent dioxygenase (IPR005123)
Non-haem dioxygenase N-terminal domain (IPR026992)
Isopenicillin N synthase-like (IPR027443)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.07,0.47,56.49,78.36,0.02,13.53,0.24,40.08
Arabidopsis thaliana homolog: AT5G08640.1
Automatic updates:
Name: MT994314 NCBI(nuccore)
Organism: Arachis hypogaea
Description: Arachis hypogaea cultivar Golden flavonol synthase (FLS) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001250490 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max flavonol synthase (FLS1), mRNA.
PubMed ID: 25124843 NCBI(pubmed)
18927222 NCBI(pubmed)
18414005 NCBI(pubmed)
17006592 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr03:32141510..32141861 (+ strand)
Length: 352
Type: five_prime_UTR
Position: Chr03:32141862..32142367 (+ strand)
Length: 506
Type: CDS
Position: Chr03:32145970..32146297 (+ strand)
Length: 328
Type: CDS
Position: Chr03:32146410..32146622 (+ strand)
Length: 213
Type: CDS
Position: Chr03:32146623..32146725 (+ strand)
Length: 103
Type: three_prime_UTR


>Vigan.03G202300.01
ATTATTCTAA AAATATATCT TAGATTAAAT AAGTATTTTT TCCACACAAT TAATGAGAGT GTTTTTAATT ATATTTTTGA
GAGATCATAA CAAATTACCT AAAAAATAAT TTAATTAGGT AATATAGAGT TGATAGGTTT CATTATTGGA TGGAAAAAAG
CATGAGAATT AATAGTACTA TAGCACTGAC AACATATTTG GTAGCACTAA CGTGTGGTAA TGGGCTGGGA AGAGTTTCAC
TTGGGCAAAG GCAAGTGCAT CATTTATTGG TAATGAATGA GACTTGGTAA AATGTTAGGT GGTGGTTTAA GTTGTATAAA
GTGAAAGGAT GAAAAGCTGT TAGATATATA GAATGATTAA GGAAGCAAGT CCATTTTTGA CGAGAGCAAG AAAGATGGAG
GTGCTGAGGG TTCAAACCAT TGCTTCACAA GAGAAGGATG GTGCAATACC AGCCATGTTT GTTAGGGCAG AAACAGAGCA
ACCGGGAATG ACGACGGTGA AAGGGGTGAA CCTTGAAGTG CCAATAATTG ATTTTAGCAA CCCAAACGAA GAGAAAGTGT
TGGATGAGAT TGTGGAGGCA AGTAGAGAGT GGGGCATGTT TCAGATTGTG AACCATGAGA TTCCTAGCCA TGTTATAAGG
AAGTTGCAGA GTGTGGGGAA AGAGTTCTTT GAATTGCCTC AAGAAGAAAA AGAGTTAATT GCTAAGCCAG CTGGGTCTCA
TTCTTTGGAA GGTTATGGCA CAAAGCTTCA AAAGGAGACC AACGGTAAGA AAGGTTGGGT GGATCATTTG TTCCACATTC
TGTGGCCACC TTCCTCCATC AATTACCATT TCTGGCCCAA GAATCCCCCT TCTTACAGGG AAGTGAACGA GGAATACTGC
AAGTATCTAC GTGGGGTGGT GGACAAATTA TTCAAAAGTA TGTCAAAAGG GTTGGGGCTG GAAGAAGATG AGCTAAAGGA
AGTGGCAAAT GAAGAAGAAA TGCATTACCT TTTGAAGATC AACTATTACC CACCTTGTCC TTGTCCTGAT CTTGTTTTGG
GTGTGCCACC ACACACAGAC ATGTCCTACC TCACCATTCT CGTACCCAAC GAGGTGCAGG GCCTCCAAGC TTCTAGGGAT
GGTCGATGGT ACGATGTTAA GTATGTTCCC AATGCCCTCG TCATTCACGT TGGTGACCAA ATGGAGATCC TTAGCAATGG
AAAATATAAG GCAGTTTTCC ACAGAACTAC AGTGAACAAA GACAAGACAA GAATGTCATG GCCAGTGTTC ATAGAGCCCA
AAGCAGAACG TGAGGTTGGT CCTCACCCAA AGTTGGTTAA CCAAGACAAT CCTCCAAAAT ACAAGACTAA GAAATACAAG
GATTATGCTT ACTGTAAGCT CAATAAGATC CCACAGTGAT TGAATACGGC ATTACGAAAT AAAAGCCAAT AATGCTTTCC
TTGTTGGTTT TGTAATTTAT GAGATTTAAG TGTAGCTTGT GCGATGCAGA CTAATTAATA TA

>Vigan.03G202300.01
ATGATTAAGG AAGCAAGTCC ATTTTTGACG AGAGCAAGAA AGATGGAGGT GCTGAGGGTT CAAACCATTG CTTCACAAGA
GAAGGATGGT GCAATACCAG CCATGTTTGT TAGGGCAGAA ACAGAGCAAC CGGGAATGAC GACGGTGAAA GGGGTGAACC
TTGAAGTGCC AATAATTGAT TTTAGCAACC CAAACGAAGA GAAAGTGTTG GATGAGATTG TGGAGGCAAG TAGAGAGTGG
GGCATGTTTC AGATTGTGAA CCATGAGATT CCTAGCCATG TTATAAGGAA GTTGCAGAGT GTGGGGAAAG AGTTCTTTGA
ATTGCCTCAA GAAGAAAAAG AGTTAATTGC TAAGCCAGCT GGGTCTCATT CTTTGGAAGG TTATGGCACA AAGCTTCAAA
AGGAGACCAA CGGTAAGAAA GGTTGGGTGG ATCATTTGTT CCACATTCTG TGGCCACCTT CCTCCATCAA TTACCATTTC
TGGCCCAAGA ATCCCCCTTC TTACAGGGAA GTGAACGAGG AATACTGCAA GTATCTACGT GGGGTGGTGG ACAAATTATT
CAAAAGTATG TCAAAAGGGT TGGGGCTGGA AGAAGATGAG CTAAAGGAAG TGGCAAATGA AGAAGAAATG CATTACCTTT
TGAAGATCAA CTATTACCCA CCTTGTCCTT GTCCTGATCT TGTTTTGGGT GTGCCACCAC ACACAGACAT GTCCTACCTC
ACCATTCTCG TACCCAACGA GGTGCAGGGC CTCCAAGCTT CTAGGGATGG TCGATGGTAC GATGTTAAGT ATGTTCCCAA
TGCCCTCGTC ATTCACGTTG GTGACCAAAT GGAGATCCTT AGCAATGGAA AATATAAGGC AGTTTTCCAC AGAACTACAG
TGAACAAAGA CAAGACAAGA ATGTCATGGC CAGTGTTCAT AGAGCCCAAA GCAGAACGTG AGGTTGGTCC TCACCCAAAG
TTGGTTAACC AAGACAATCC TCCAAAATAC AAGACTAAGA AATACAAGGA TTATGCTTAC TGTAAGCTCA ATAAGATCCC
ACAGTGA

>Vigan.03G202300.01
MIKEASPFLT RARKMEVLRV QTIASQEKDG AIPAMFVRAE TEQPGMTTVK GVNLEVPIID FSNPNEEKVL DEIVEASREW
GMFQIVNHEI PSHVIRKLQS VGKEFFELPQ EEKELIAKPA GSHSLEGYGT KLQKETNGKK GWVDHLFHIL WPPSSINYHF
WPKNPPSYRE VNEEYCKYLR GVVDKLFKSM SKGLGLEEDE LKEVANEEEM HYLLKINYYP PCPCPDLVLG VPPHTDMSYL
TILVPNEVQG LQASRDGRWY DVKYVPNALV IHVGDQMEIL SNGKYKAVFH RTTVNKDKTR MSWPVFIEPK AEREVGPHPK
LVNQDNPPKY KTKKYKDYAY CKLNKIPQ*