GBrowse Details

Vigan.03G233200.01

Basic Information:
Name: Vigan.03G233200.01
Multiple alignment
Variant Information
Position: Chr03:36677525..36690181 (+ strand)
Length: 12657
Functional Information:
Description: Similar to Uncharacterized protein. [I1M9I8, Glycine max]
InterPro: Triose-phosphate transporter domain (IPR004853)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:18.12,16.85,5.05,14.29,3.88,3.23,11.63,5.25
Arabidopsis thaliana homolog: AT4G32272.2
Automatic updates:
Name: NM_001255148 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-like (LOC100819763), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:36677525..36677728 (+ strand)
Length: 204
Type: five_prime_UTR
Position: Chr03:36677729..36677885 (+ strand)
Length: 157
Type: CDS
Position: Chr03:36677973..36678049 (+ strand)
Length: 77
Type: CDS
Position: Chr03:36680061..36680222 (+ strand)
Length: 162
Type: CDS
Position: Chr03:36680317..36680450 (+ strand)
Length: 134
Type: CDS
Position: Chr03:36681856..36681986 (+ strand)
Length: 131
Type: CDS
Position: Chr03:36682098..36682142 (+ strand)
Length: 45
Type: CDS
Position: Chr03:36682243..36682340 (+ strand)
Length: 98
Type: CDS
Position: Chr03:36682967..36683074 (+ strand)
Length: 108
Type: CDS
Position: Chr03:36689608..36689664 (+ strand)
Length: 57
Type: CDS
Position: Chr03:36689758..36689832 (+ strand)
Length: 75
Type: CDS
Position: Chr03:36689833..36690181 (+ strand)
Length: 349
Type: three_prime_UTR


>Vigan.03G233200.01
TCTTGGAGTG TGATGGAAAC AGTTTGAGAG CTGAGAGTTG AATTGACCAA GTCGTGAAGT CGGGATTCGC TAGTGGCCTT
CTAGACTGGG TCTGACTCTA ACCCCTCTCT CATTCTTCGC CTTTCACTTC CTCGAATTCT CCTTCAAACT CCAATCCAAT
CGCAAAACCA AACCAAACCC TTCGCTCTCC AATTCCCTTT CTCTATGTCT CTCAAACCGT CAAATTCCTC GCAGAATCTC
ATGCTCCCCG TCTCCGATCC TCCCTCCATC CAAGACGATT ACGCCGATGA CAAGCTCTTC AGAGGCTCCG CCATGACCAA
ACGCGGAGCC TTCGCCGCCG TCTCTTACAT GTCCTGCGCT GTTTTGCTGG TGATGTTCAA TAAAGCAGCG CTTTCGTCTT
ATAATTTTCC CTCCGCCAAT GTTATCACAC TTCTTCAGAT GGTGTGTTCG TGTTGCTTCC TCTATCTGTT GAGACGATGG
AGGATGATAT CTTTCTCAGC AAATGAATCC TTACTTATAT CAGATACCTC AACAAAATTT GTATCACTGA AGACTTTGAA
GCACACTCTT CCTCTGTCAG GAGCATACTT ATTTTACATG CTAGTCACCA TGGAGTCTGT TCGTGGAGTA AATGTTCCAA
TGTACACAAC TCTGAGGAGG ACCACAGTGG TGTTTACAAT GCTTGTTGAG TTTGCTCTGG TGGGGCAGAG GTATACACGT
TCGGTCATTT TAAGTGTTGG CTTGATTGTC TTTGGTGCCT TTGTTGCGGG AGCTCGGGAT CTTTCTTTTG ATGCTTATGG
CTATGCTGTT GTTTTCATGT CAAACATCGC CACAGCAATA TATCTCGCAA CTATATCCCG CATTGGGAAA ACTAGTGGTC
TTAATAGCTT TGGGCTTATG TGGTGCAATG GTATCATATG TGGGCCTGTT TTACTGATCT GGACATTTGT TCGTGGTGAT
TTGAAGATAT CAATCAATTT TCCATATCTC TTCTCACCTG GTTTTATCGT TATTTTGCTT TTTTCCTGCA TACTGGCATT
CTTCTTGAAT TACTGTATTT TTCTGAACAC AACTCTAAAT TCAGCTGTCA CACAGACAAT TTGTGGTAAT CTGAAGGATC
TATTTACTAT TGGTCTTGGC TGGATAATTT TTGGTGGGCT ACCTTTTGAT ATTTGGAACA TATCCGGGCA ATTTCTTGGT
TTTGCTGGAT CTGGTCTATA TGCCTACTAC AAGCTCATTG GCAAATAACT GACTCGAGTT CTCTAGATGA AGTTTTTGTT
TTTTCAATTT GGGAGTGCCA TTTGCTTCAG TTTTCTGCCC ATTACTGCAT TCCTCGAGAA GGAAGAAGAA CCTGAACGAA
CTCGGGTATT GGAACTTGTG ATCGACAGAT CGATACTTGT GGGAAATTTT GCTAATTACA ACTTGACATA CGACTGTTTC
TGGGGAACTA GAGGAGAAAG GCTGTCATGG CTATAGTGTA TTCAAACATC TAATTTGATT AATGCTATGC ATATCTCTCT
GGAAGTGTAA CTGTTAACAA ACATTGTATT TTAATAGAAA ATTCATCGTA GACAGAAAAT TTAAATCTAC CAATTCA

>Vigan.03G233200.01
ATGTCTCTCA AACCGTCAAA TTCCTCGCAG AATCTCATGC TCCCCGTCTC CGATCCTCCC TCCATCCAAG ACGATTACGC
CGATGACAAG CTCTTCAGAG GCTCCGCCAT GACCAAACGC GGAGCCTTCG CCGCCGTCTC TTACATGTCC TGCGCTGTTT
TGCTGGTGAT GTTCAATAAA GCAGCGCTTT CGTCTTATAA TTTTCCCTCC GCCAATGTTA TCACACTTCT TCAGATGGTG
TGTTCGTGTT GCTTCCTCTA TCTGTTGAGA CGATGGAGGA TGATATCTTT CTCAGCAAAT GAATCCTTAC TTATATCAGA
TACCTCAACA AAATTTGTAT CACTGAAGAC TTTGAAGCAC ACTCTTCCTC TGTCAGGAGC ATACTTATTT TACATGCTAG
TCACCATGGA GTCTGTTCGT GGAGTAAATG TTCCAATGTA CACAACTCTG AGGAGGACCA CAGTGGTGTT TACAATGCTT
GTTGAGTTTG CTCTGGTGGG GCAGAGGTAT ACACGTTCGG TCATTTTAAG TGTTGGCTTG ATTGTCTTTG GTGCCTTTGT
TGCGGGAGCT CGGGATCTTT CTTTTGATGC TTATGGCTAT GCTGTTGTTT TCATGTCAAA CATCGCCACA GCAATATATC
TCGCAACTAT ATCCCGCATT GGGAAAACTA GTGGTCTTAA TAGCTTTGGG CTTATGTGGT GCAATGGTAT CATATGTGGG
CCTGTTTTAC TGATCTGGAC ATTTGTTCGT GGTGATTTGA AGATATCAAT CAATTTTCCA TATCTCTTCT CACCTGGTTT
TATCGTTATT TTGCTTTTTT CCTGCATACT GGCATTCTTC TTGAATTACT GTATTTTTCT GAACACAACT CTAAATTCAG
CTGTCACACA GACAATTTGT GGTAATCTGA AGGATCTATT TACTATTGGT CTTGGCTGGA TAATTTTTGG TGGGCTACCT
TTTGATATTT GGAACATATC CGGGCAATTT CTTGGTTTTG CTGGATCTGG TCTATATGCC TACTACAAGC TCATTGGCAA
ATAA

>Vigan.03G233200.01
MSLKPSNSSQ NLMLPVSDPP SIQDDYADDK LFRGSAMTKR GAFAAVSYMS CAVLLVMFNK AALSSYNFPS ANVITLLQMV
CSCCFLYLLR RWRMISFSAN ESLLISDTST KFVSLKTLKH TLPLSGAYLF YMLVTMESVR GVNVPMYTTL RRTTVVFTML
VEFALVGQRY TRSVILSVGL IVFGAFVAGA RDLSFDAYGY AVVFMSNIAT AIYLATISRI GKTSGLNSFG LMWCNGIICG
PVLLIWTFVR GDLKISINFP YLFSPGFIVI LLFSCILAFF LNYCIFLNTT LNSAVTQTIC GNLKDLFTIG LGWIIFGGLP
FDIWNISGQF LGFAGSGLYA YYKLIGK*