GBrowse Details

Vigan.03G263100.01

Basic Information:
Name: Vigan.03G263100.01
Multiple alignment
Variant Information
Position: Chr03:40301163..40303347 (+ strand)
Length: 2185
Functional Information:
Description: Similar to Uncharacterized protein. [I1MXH9, Glycine max]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.33,2.15,88.47,44.50,12.34,83.27,9.91,23.91
Arabidopsis thaliana homolog: AT3G03990.1
Automatic updates:
Name: NM_001360147 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max alpha/beta hydroxylase D14 (D14), transcript variant 2, mRNA.
PubMed ID: 31559658 NCBI(pubmed)
29268717 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr03:40301163..40301380 (+ strand)
Length: 218
Type: five_prime_UTR
Position: Chr03:40301381..40301751 (+ strand)
Length: 371
Type: CDS
Position: Chr03:40302309..40302738 (+ strand)
Length: 430
Type: CDS
Position: Chr03:40302739..40303347 (+ strand)
Length: 609
Type: three_prime_UTR


>Vigan.03G263100.01
GGAGAATGGT GTGTTGTGAT TGAGTGAAGG GTGGTGGTGG CAGTTATAAA TAGCACCCAA AGAGACAAAG GAAACAAAAT
ATAAAATTAA ACAACCACCT TCGATTCAAC TGTTTCAAAC CCCAAAGGCC ACGCGCTCTC TTTCTCTCAC ACACAAACCA
AACCCACTCC ACTTGTGTGT CGTGTGTGTG AGTGTTCCTC TCTCTGAACA AATTCGGTAT GGGGAGTTCC ATTCTGGACG
CACTCAACGT GCGCGTTGAG GGCACCGGCG ACAAGTACCT GGTCCTGGCA CACGGCTTCG GCACAGACCA GTCGGCGTGG
CAGCGCGTGC TTCCCTACTT CACGCGCCAC TACAGCGTCA TTCTCTACGA CCTGGTGTGC GCCGGCAGCG TCAACCCAGA
CCACTTCGAC TACCGCCGCT ACACCACCCT CGACGCCTAC GTCGACGACC TCCTCAACAT CCTCGAGGCC CTCCGCGTCC
CCCGCTGCGC CTACGTCGGC CACTCCATCT CTGCCATGAT CGGCATGCTA GCCTCCATCC GCCGTCCCGA CCTCTTCTCC
AAACTCATCC TCATCGGCGC CTCCCCCAGA TTTCTGAACG ACAAGGACTA CCATGGGGGA TTCGAGCAGG GAGAGATCGA
GCAGGTGTTC TCGGCAATGG AGGCCAACTA CGAGGCGTGG GTGAACGGTT TCGCGCCACT GGCGGTGGGG GCGGACGTGC
CGACGGCTGT GAGGGAGTTT TCTCGGACGC TGTTCAACAT GCGACCGGAC ATCTCGCTGT TCGTGTCGCG CACGGTTTTC
AACAGCGACC TGAGGGGGAT TCTTGGTCTG GTTTGCGTGC CCTGCTGCAT CATGCAAACG GCACGTGACA TGTCCGTGCC
TGAAACCGTG GCCAAATACA TGAAGGAGCA CATCGGCGGG AAAAGCACCA TCCAATGGCT GGACACGGAG GGTCACCTCC
CGCATCTCAG CGCTCCCTCC TACCTGGCTC GGCAGTTGGA GATCGCGCTG TCGCAGTAGC GCGTTGAGTG GCGGCGCGTG
ATAGTTCATT AATTAAATGA TTAAGTGTTG CAGTAGTATT AGTGTTAGTA TTATTAGCAG TAGAAGGGTA GGGTAGAAGC
TACTACGAAG GGTACTAGAA GAAATGTACG AAAGGCTCCG AAAGTGGACA CGTGGCGAAT AACGTGTGGG TGTTTGCTTC
TTGGACTTTC GGATTTTTAT TTTAGGATAA GAATCTGCAC GTGGATTTCA CGTGATGCGT CCCCAGTTTT AGTAGTATCT
CTCTATCAAC GTAATTATTA TTATTAAACT AAAACATTCT CTTTATTTTT TACTAAAATT TATTAAATCT CAATTAAATT
TTGAGATTTT TATTAAATTT TAGTGGCGGA TAAAGAGAGC GATTTTAGTT TTTTTTTATC GCTTTTTGTA GTTCTTTCCT
ATTTTTCGAG AGAAAAAGAA TAGCAGAAAT GAGAGAGACC TGTCTGTTAG TGTGATTGTA GTTTTTATTA TTAATATTAT
TACGATTGCA GTTGGTTGTT GTTGCTATTG TGAAAGGTGT TGCTTTGATT TTGTGGCCCA CTTATTATTG GGCCTCAGCC
TTATTTGAGG TTTTTTTTTA TTAATTTA

>Vigan.03G263100.01
ATGGGGAGTT CCATTCTGGA CGCACTCAAC GTGCGCGTTG AGGGCACCGG CGACAAGTAC CTGGTCCTGG CACACGGCTT
CGGCACAGAC CAGTCGGCGT GGCAGCGCGT GCTTCCCTAC TTCACGCGCC ACTACAGCGT CATTCTCTAC GACCTGGTGT
GCGCCGGCAG CGTCAACCCA GACCACTTCG ACTACCGCCG CTACACCACC CTCGACGCCT ACGTCGACGA CCTCCTCAAC
ATCCTCGAGG CCCTCCGCGT CCCCCGCTGC GCCTACGTCG GCCACTCCAT CTCTGCCATG ATCGGCATGC TAGCCTCCAT
CCGCCGTCCC GACCTCTTCT CCAAACTCAT CCTCATCGGC GCCTCCCCCA GATTTCTGAA CGACAAGGAC TACCATGGGG
GATTCGAGCA GGGAGAGATC GAGCAGGTGT TCTCGGCAAT GGAGGCCAAC TACGAGGCGT GGGTGAACGG TTTCGCGCCA
CTGGCGGTGG GGGCGGACGT GCCGACGGCT GTGAGGGAGT TTTCTCGGAC GCTGTTCAAC ATGCGACCGG ACATCTCGCT
GTTCGTGTCG CGCACGGTTT TCAACAGCGA CCTGAGGGGG ATTCTTGGTC TGGTTTGCGT GCCCTGCTGC ATCATGCAAA
CGGCACGTGA CATGTCCGTG CCTGAAACCG TGGCCAAATA CATGAAGGAG CACATCGGCG GGAAAAGCAC CATCCAATGG
CTGGACACGG AGGGTCACCT CCCGCATCTC AGCGCTCCCT CCTACCTGGC TCGGCAGTTG GAGATCGCGC TGTCGCAGTA
G

>Vigan.03G263100.01
MGSSILDALN VRVEGTGDKY LVLAHGFGTD QSAWQRVLPY FTRHYSVILY DLVCAGSVNP DHFDYRRYTT LDAYVDDLLN
ILEALRVPRC AYVGHSISAM IGMLASIRRP DLFSKLILIG ASPRFLNDKD YHGGFEQGEI EQVFSAMEAN YEAWVNGFAP
LAVGADVPTA VREFSRTLFN MRPDISLFVS RTVFNSDLRG ILGLVCVPCC IMQTARDMSV PETVAKYMKE HIGGKSTIQW
LDTEGHLPHL SAPSYLARQL EIALSQ*