GBrowse Details

Vigan.03G287200.01

Basic Information:
Name: Vigan.03G287200.01
Multiple alignment
Variant Information
Position: Chr03:42522713..42526631 (+ strand)
Length: 3919
Functional Information:
Description: Similar to Uncharacterized protein. [I1MY10, Glycine max]
GO: Molecular Function: catalytic activity (GO:0003824)
InterPro: Alpha/beta hydrolase fold-1 (IPR000073)
Epoxide hydrolase-like (IPR000639)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:16.89,13.67,8.05,12.49,10.00,4.87,15.26,9.36
Arabidopsis thaliana homolog: AT4G24160.1
Automatic updates:
Name: NM_001254206 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative 1-acylglycerol-3-phosphate O-acyltransferase (LOC100789925), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:42522713..42522956 (+ strand)
Length: 244
Type: five_prime_UTR
Position: Chr03:42522957..42523144 (+ strand)
Length: 188
Type: CDS
Position: Chr03:42523744..42523980 (+ strand)
Length: 237
Type: CDS
Position: Chr03:42524062..42524108 (+ strand)
Length: 47
Type: CDS
Position: Chr03:42524205..42524323 (+ strand)
Length: 119
Type: CDS
Position: Chr03:42524417..42524565 (+ strand)
Length: 149
Type: CDS
Position: Chr03:42525352..42525461 (+ strand)
Length: 110
Type: CDS
Position: Chr03:42525561..42525660 (+ strand)
Length: 100
Type: CDS
Position: Chr03:42526080..42526203 (+ strand)
Length: 124
Type: CDS
Position: Chr03:42526286..42526411 (+ strand)
Length: 126
Type: CDS
Position: Chr03:42526412..42526631 (+ strand)
Length: 220
Type: three_prime_UTR


>Vigan.03G287200.01
ATTAAGGTGC ACATGCGTCA TTGCGCGCGT AAGCTTTTTC TCCGATGTTC CCTTTTTCTT CTTTCTGCTC CGTTCTCGTT
GTTTCAGTAT CAGCAAATTT GACAGTTGTT CTTCTCTTTT CTGCTTAAAA CCTTTTTCCT CTCTTCTGCT TCAAATCTTT
CTCAATTTGT TCAAATCATT TGTAACTTTT CCAACTACTC TGATACCAAA CAGAGTCACT GTTAGTTGGT TTATTCGTTA
TTGGATGAAC GCAATTCGTT CTCGTTGGTT TATGAGAATG GCAGAAGACC TTGGAAAGAG CAACCTCGAA TCCTCTGCTG
CTTCTGTTTC CACGACAACC TCGCGACGCT TTTGGCCTTC CGTCTTACGT TGGATACCCA CTTCCACCGA CCACATCATC
AATTCCGAGA AGCGGCTTCT CTCTCTTGTC AAGACTCCAT ATGTTCAAGA ACAGATTAAT ATTGGTTCTG GTCCACCTGA
TTCCAGAGTT AGATGGTTTC GTTCATCGAG CAATGAACCA CGGTTTATTA ACACTGTCAC ATTTGACAGT AAGGATGACT
CTCCCACTTT GGTAATGGTT CATGGATATG CCGCGTCACA GGGTTTCTTT TTTCGTAATT TTGATGCACT TGCCACTCGT
TTCAGAGTTA TTGCTATCGA TCAACTTGGT TGGGGTGGAT CTAGCAGGCC TGACTTTTCA TGCAGAAGCA CTGAAGAAAC
TGAGGCGTGG TTCATTGATT CTTTTGAGGA ATGGAGAAAA GCCAAAAACC TGAGCAATTT TATACTACTA GGGCATTCTT
TTGGTGGTTA TGTTGCTTCC AAATACGCAC TTAAGCACCC CGAACATGTA AAACACTTGA TTTTGGTGGG ACCTGCTGGA
TTTTCGTCTG AATCAGAGAG AATTACAAAG TTCTTATCTA CATGGAAGGG ATCAATCCTG AATCAAATAT GGGAATCTAA
TTTTACGCCT CAGAAAATCA TCAGGGGTCT AGGTCCTTGG GGTCCTGATA TGGTCCGCAA GTATACCAGT GCCAGGTTTG
TTACACATAC AACTGGAGAA ATGCTGACAG AATCTGAATC AAGATTACTG ACAGATTATG TTTACCATAC TTTAGCAGCG
AAAGCTAGTG GCGAGCTGTG CTTAAAATAT CTATTTTCAT TTGGAGCACT GCCGAGGTCG CCTCTTCTTG ACAGGGCATC
AGAGTGGAAG GTGCCCACCA CTTTCATATA TGGTTTTCAG GACTGGATGA ATTATGAAGG AGCTCAAAAA GCTCGCAAAG
ATATGAAGGT TCCCTGTGAA ATACTTAGGG TTCCTCAGGC CGGGCACTTT GTGTTCATTG ACAACCCTAG TAGCTTTCAT
TCAGCTGTGT TTTACGCTTG CCGAAGGTTT CTAAGTTCTC ATCCAGACCG TGAATCCCTT CCTGAATGGC TAATCTCAGC
ATAGAGTATA ATAATCTTGT TCCTCTGCAC TGCTGTCTAT GATTATTTAC AATTTCACAA ATTAAATTCC TTAATTATTT
CAAGCCATGT CCTGTTCATG CTTAAATGGA TTTTTCATCT CTAAGGGCAT TTTAAAAAAT AATGACCTGT AATATAGATC
TTGTCACTAA AATATGTTCA TTATAACTTG TTATTAGGTT GTCTATTTAT TGTGTTACTG GTGA

>Vigan.03G287200.01
ATGAACGCAA TTCGTTCTCG TTGGTTTATG AGAATGGCAG AAGACCTTGG AAAGAGCAAC CTCGAATCCT CTGCTGCTTC
TGTTTCCACG ACAACCTCGC GACGCTTTTG GCCTTCCGTC TTACGTTGGA TACCCACTTC CACCGACCAC ATCATCAATT
CCGAGAAGCG GCTTCTCTCT CTTGTCAAGA CTCCATATGT TCAAGAACAG ATTAATATTG GTTCTGGTCC ACCTGATTCC
AGAGTTAGAT GGTTTCGTTC ATCGAGCAAT GAACCACGGT TTATTAACAC TGTCACATTT GACAGTAAGG ATGACTCTCC
CACTTTGGTA ATGGTTCATG GATATGCCGC GTCACAGGGT TTCTTTTTTC GTAATTTTGA TGCACTTGCC ACTCGTTTCA
GAGTTATTGC TATCGATCAA CTTGGTTGGG GTGGATCTAG CAGGCCTGAC TTTTCATGCA GAAGCACTGA AGAAACTGAG
GCGTGGTTCA TTGATTCTTT TGAGGAATGG AGAAAAGCCA AAAACCTGAG CAATTTTATA CTACTAGGGC ATTCTTTTGG
TGGTTATGTT GCTTCCAAAT ACGCACTTAA GCACCCCGAA CATGTAAAAC ACTTGATTTT GGTGGGACCT GCTGGATTTT
CGTCTGAATC AGAGAGAATT ACAAAGTTCT TATCTACATG GAAGGGATCA ATCCTGAATC AAATATGGGA ATCTAATTTT
ACGCCTCAGA AAATCATCAG GGGTCTAGGT CCTTGGGGTC CTGATATGGT CCGCAAGTAT ACCAGTGCCA GGTTTGTTAC
ACATACAACT GGAGAAATGC TGACAGAATC TGAATCAAGA TTACTGACAG ATTATGTTTA CCATACTTTA GCAGCGAAAG
CTAGTGGCGA GCTGTGCTTA AAATATCTAT TTTCATTTGG AGCACTGCCG AGGTCGCCTC TTCTTGACAG GGCATCAGAG
TGGAAGGTGC CCACCACTTT CATATATGGT TTTCAGGACT GGATGAATTA TGAAGGAGCT CAAAAAGCTC GCAAAGATAT
GAAGGTTCCC TGTGAAATAC TTAGGGTTCC TCAGGCCGGG CACTTTGTGT TCATTGACAA CCCTAGTAGC TTTCATTCAG
CTGTGTTTTA CGCTTGCCGA AGGTTTCTAA GTTCTCATCC AGACCGTGAA TCCCTTCCTG AATGGCTAAT CTCAGCATAG


>Vigan.03G287200.01
MNAIRSRWFM RMAEDLGKSN LESSAASVST TTSRRFWPSV LRWIPTSTDH IINSEKRLLS LVKTPYVQEQ INIGSGPPDS
RVRWFRSSSN EPRFINTVTF DSKDDSPTLV MVHGYAASQG FFFRNFDALA TRFRVIAIDQ LGWGGSSRPD FSCRSTEETE
AWFIDSFEEW RKAKNLSNFI LLGHSFGGYV ASKYALKHPE HVKHLILVGP AGFSSESERI TKFLSTWKGS ILNQIWESNF
TPQKIIRGLG PWGPDMVRKY TSARFVTHTT GEMLTESESR LLTDYVYHTL AAKASGELCL KYLFSFGALP RSPLLDRASE
WKVPTTFIYG FQDWMNYEGA QKARKDMKVP CEILRVPQAG HFVFIDNPSS FHSAVFYACR RFLSSHPDRE SLPEWLISA*