GBrowse Details

Vigan.03G292600.01

Basic Information:
Name: Vigan.03G292600.01
Multiple alignment
Variant Information
Position: Chr03:42995066..42999900 (+ strand)
Length: 4835
Functional Information:
Description: Similar to Uncharacterized protein. [I1MC32, Glycine max]
GO: Biological Process: protein folding (GO:0006457)
Biological Process: response to stress (GO:0006950)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: unfolded protein binding (GO:0051082)
InterPro: Heat shock protein Hsp90 family (IPR001404)
Histidine kinase-like ATPase, ATP-binding domain (IPR003594)
Endoplasmin (IPR015566)
Heat shock protein Hsp90, conserved site (IPR019805)
Ribosomal protein S5 domain 2-type fold (IPR020568)
Heat shock protein Hsp90, N-terminal (IPR020575)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:33.22,137.18,182.89,103.15,314.44,284.41,95.04,175.28
Arabidopsis thaliana homolog: AT2G04030.1, AT3G07770.1, AT4G24190.1, AT5G52640.1, AT5G56000.1, AT5G56010.1, AT5G56030.2
Automatic updates:
Name: NM_001357388 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max HSP90 superfamily protein (LOC100819942), mRNA.
PubMed ID: 27862521 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr03:42995066..42995162 (+ strand)
Length: 97
Type: five_prime_UTR
Position: Chr03:42995163..42995229 (+ strand)
Length: 67
Type: CDS
Position: Chr03:42995324..42995444 (+ strand)
Length: 121
Type: CDS
Position: Chr03:42995535..42995688 (+ strand)
Length: 154
Type: CDS
Position: Chr03:42995801..42995881 (+ strand)
Length: 81
Type: CDS
Position: Chr03:42996042..42996153 (+ strand)
Length: 112
Type: CDS
Position: Chr03:42996237..42996363 (+ strand)
Length: 127
Type: CDS
Position: Chr03:42996464..42996602 (+ strand)
Length: 139
Type: CDS
Position: Chr03:42996994..42997111 (+ strand)
Length: 118
Type: CDS
Position: Chr03:42997249..42997445 (+ strand)
Length: 197
Type: CDS
Position: Chr03:42997545..42997760 (+ strand)
Length: 216
Type: CDS
Position: Chr03:42997853..42998018 (+ strand)
Length: 166
Type: CDS
Position: Chr03:42998274..42998412 (+ strand)
Length: 139
Type: CDS
Position: Chr03:42998507..42998657 (+ strand)
Length: 151
Type: CDS
Position: Chr03:42998850..42999254 (+ strand)
Length: 405
Type: CDS
Position: Chr03:42999360..42999617 (+ strand)
Length: 258
Type: CDS
Position: Chr03:42999618..42999900 (+ strand)
Length: 283
Type: three_prime_UTR


>Vigan.03G292600.01
AAACCATCTA AACGCAGATG CGAAATCAAT CCAAACTAAA CGGATCTCTT CTTCACTGTT GGAAGCTACT AGAAGCATTG
AGTGTGCGCG CACTGCGATG AGGAAGTGGA CGGTTGCTTC CGTTCTCCTT CTACTCTGTC TCCTCTTTCT CTTTGCAGAT
CAAGGTCGAA AGTTTCAGGC GAATGCCGCG GGTGATTCCG ACGGCGTTGT AGATCCGCCC AAGGTGGAGG ACAAGATCGG
CGCGGTTCCT CATGGCCTTT CTACCGATTC AGATGTGGTC AAAAGGGAGG CGGAGTCGAT CTCGAAGAAA TCTCTTCGGA
GCAACGCCGA GAAGTTTGAG TTCCAAGCGG AAGTGTCACG GCTCATGGAT ATTATCATCA ACTCTCTCTA TAGTAACAAG
GATATCTTCC TCAGAGAGTT GATTTCCAAT GCTTCTGACG CTTTGGACAA GATTAGGTTC CTCTCTCTCA CGGACAAGGA
GGTTTTGGGA GAAGGTGATA ACACCAAGCT TGATATTCAG ATTAAATTAG ACAAGGAAAA GAAAATTCTC TCGATCAGAG
ACCGGGGTAT TGGTATGACG AAGGAGGATT TGATTAAGAA TTTGGGAACA ATTGCTAAAT CTGGAACTTC AGCATTTGTT
GAGAAAATGC AAACAAGTGG AGATCTCAAT CTCATTGGGC AGTTTGGTGT CGGCTTTTAC TCTGTGTATC TCGTGGCTGA
CTATGTTGAA GTTATTAGCA AGCATAATGA GGATAAGCAG TATGTATGGG AATCAAAAGC TGATGGAGCT TTCGCAATCT
CGGAAGATAC ATGGAACGAA CCTCTAGGAC GTGGAACCGA GATTAGACTA CACCTCAAAG AAGAGGCTGG GGAGTACTTA
GAGGAATCTA AACTGAAAGA ATTGGTGAAG AGGTACTCTG AATTTATTAA CTTCCCTATC TATATTTGGG CAAGCAAAGA
GGTTGATGTG GAGGTTCCCG CAGATGAAGA TGATTCCGGT GATGAAGATG ATTCTGCTGA TGGCAGCTCC AAGGAGGAAA
CCGAAGACGA AGATGCTGAT AAAGGTGAAG ATGAAGACAA GCCTAAGACA AAAACAGTGA AGGAAACAAC TTACGAATGG
GAACTTCTAA ATGATGTGAA AGCTATATGG CTGAGGAATC CAAAGGAGGT TACCGAGGAA GAATACACCA AATTCTACCA
CTCTCTTGCC AAGGATTTCA GTGATGAGAA ACCTCTATCG TGGAGTCACT TCACTGCCGA AGGTGATGTA GAGTTCAAGG
CAGTCCTGTT TGTACCACCT AAGGCACCTC AGGATTTATA CGAGAGCTAT TATAACGCAA ACAAATCCAA CCTGAAGTTG
TATGTTAGAC GAGTCTTCAT TTCAGACGAG TTTGATGAAC TGTTGCCCAA GTACCTAAAC TTCTTGAGGG GTCTTGTTGA
TTCCGACACA TTGCCACTCA ATGTATCGCG AGAAATGCTT CAACAACATA ATAGTCTAAA GACAATCAAG AAGAAACTTA
TCAGGAAAGC CCTTGATATG ATCCGTAGGA TTGCTGATGA GGATCCTGAC GAGTCCAGTG ACAGAGAAAA GAAAGAAGAT
GCATCCTCTG ACAACGATGA GAAGAAAGGT CAATATGTCA AGTTCTGGAA TGAATTTGGT AAATCCATTA AACTTGGTAT
CATCGAGGAT GCCACTAACA GAAATCGGTT GGCAAAATTG CTCAGATTTG AGAGCACCAA GTCTGATGGT AAATTGACAT
CCCTGGATCA GTACATTTCT AGAATGAAAG CTGGCCAGAA GGACATCTTT TACATAACTG GAACCAGCAA AGAACAGCTG
GAGAAATCTC CATTCCTTGA ACAGCTTAAG AAGAAAAATT TTGAGGTTAT TTACTTCACG GATCCAGTTG ATGAATACTT
AATGCAATAC CTGATGGATT ATGAAGATAA AAAGTTCCAA AATGTGTCCA AGGAGGGTTT GAAACTCGGG AAGGATACGA
AAAACAAGGA ACTGAAGGAA TCCTTTAAGG ATCTTACGAA GTGGTGGAAA ACTGCTCTAT CCAAGGATAA TGTCGATGAT
GTGAAGATAT CCAACCGATT GGATAACACT CCTTGTGTAG TAGTGACATC AAAATATGGT TGGAGTGCAA ACATGGAGCG
AATCATGCAG TCTCAAACTT TGTCAGATGC TAGCAAGCAA GCATACATGC GTGGGAAGAG GGTGCTTGAG ATCAATCCTA
GGCATCCTAT TATCAAGGAG CTCCGCGAGA GAGTAGTAAA GAACCCCGAG GATGAGGGCG TGAAACAAAC AGCACAGCTG
ATGTACCAGA CTGCACTCTT CGAAAGTGGC TTCAATCTTG ATGATCCTAA GGATTTCACT TCCCGTATTT ATGATTCGGT
GAAGTCTAGT ATGAACATCA GTCCTGATGC AACAGTTGAA GAGGAAGATG ACACCGAGGC GGAGGCTGAA AGTGAGGTAA
AAGAAACTCC AAACAAGCCT GAAGCTGAAG TTGATGATGA TGTTGACGAT GCGAAAGACG AGTTGTAGAT TTCAATGACA
TCCACTATTT ATTGACGGTG CTGTCGGTTT CCTTTTCTTT TTCATGGTTT AGCTAATAGA CCGTAATAGC TTTATGTACG
AGTTTTGTTT TCGTAAGTTT AAGACCTTAG TGTAATCATC TTTTACGTTG GAATTTTGTC CTCCCACCAT ACTAGCTTAA
CACAATTTTC GGTCACAAGT TTACTTCTTT GTCTTTACTA TCATCAGCGT CGTGTCAAAA GATTTCGCCG CATTATGAGA
AAAATATATC ATAAAAAATG ATAAGTATTT A

>Vigan.03G292600.01
ATGAGGAAGT GGACGGTTGC TTCCGTTCTC CTTCTACTCT GTCTCCTCTT TCTCTTTGCA GATCAAGGTC GAAAGTTTCA
GGCGAATGCC GCGGGTGATT CCGACGGCGT TGTAGATCCG CCCAAGGTGG AGGACAAGAT CGGCGCGGTT CCTCATGGCC
TTTCTACCGA TTCAGATGTG GTCAAAAGGG AGGCGGAGTC GATCTCGAAG AAATCTCTTC GGAGCAACGC CGAGAAGTTT
GAGTTCCAAG CGGAAGTGTC ACGGCTCATG GATATTATCA TCAACTCTCT CTATAGTAAC AAGGATATCT TCCTCAGAGA
GTTGATTTCC AATGCTTCTG ACGCTTTGGA CAAGATTAGG TTCCTCTCTC TCACGGACAA GGAGGTTTTG GGAGAAGGTG
ATAACACCAA GCTTGATATT CAGATTAAAT TAGACAAGGA AAAGAAAATT CTCTCGATCA GAGACCGGGG TATTGGTATG
ACGAAGGAGG ATTTGATTAA GAATTTGGGA ACAATTGCTA AATCTGGAAC TTCAGCATTT GTTGAGAAAA TGCAAACAAG
TGGAGATCTC AATCTCATTG GGCAGTTTGG TGTCGGCTTT TACTCTGTGT ATCTCGTGGC TGACTATGTT GAAGTTATTA
GCAAGCATAA TGAGGATAAG CAGTATGTAT GGGAATCAAA AGCTGATGGA GCTTTCGCAA TCTCGGAAGA TACATGGAAC
GAACCTCTAG GACGTGGAAC CGAGATTAGA CTACACCTCA AAGAAGAGGC TGGGGAGTAC TTAGAGGAAT CTAAACTGAA
AGAATTGGTG AAGAGGTACT CTGAATTTAT TAACTTCCCT ATCTATATTT GGGCAAGCAA AGAGGTTGAT GTGGAGGTTC
CCGCAGATGA AGATGATTCC GGTGATGAAG ATGATTCTGC TGATGGCAGC TCCAAGGAGG AAACCGAAGA CGAAGATGCT
GATAAAGGTG AAGATGAAGA CAAGCCTAAG ACAAAAACAG TGAAGGAAAC AACTTACGAA TGGGAACTTC TAAATGATGT
GAAAGCTATA TGGCTGAGGA ATCCAAAGGA GGTTACCGAG GAAGAATACA CCAAATTCTA CCACTCTCTT GCCAAGGATT
TCAGTGATGA GAAACCTCTA TCGTGGAGTC ACTTCACTGC CGAAGGTGAT GTAGAGTTCA AGGCAGTCCT GTTTGTACCA
CCTAAGGCAC CTCAGGATTT ATACGAGAGC TATTATAACG CAAACAAATC CAACCTGAAG TTGTATGTTA GACGAGTCTT
CATTTCAGAC GAGTTTGATG AACTGTTGCC CAAGTACCTA AACTTCTTGA GGGGTCTTGT TGATTCCGAC ACATTGCCAC
TCAATGTATC GCGAGAAATG CTTCAACAAC ATAATAGTCT AAAGACAATC AAGAAGAAAC TTATCAGGAA AGCCCTTGAT
ATGATCCGTA GGATTGCTGA TGAGGATCCT GACGAGTCCA GTGACAGAGA AAAGAAAGAA GATGCATCCT CTGACAACGA
TGAGAAGAAA GGTCAATATG TCAAGTTCTG GAATGAATTT GGTAAATCCA TTAAACTTGG TATCATCGAG GATGCCACTA
ACAGAAATCG GTTGGCAAAA TTGCTCAGAT TTGAGAGCAC CAAGTCTGAT GGTAAATTGA CATCCCTGGA TCAGTACATT
TCTAGAATGA AAGCTGGCCA GAAGGACATC TTTTACATAA CTGGAACCAG CAAAGAACAG CTGGAGAAAT CTCCATTCCT
TGAACAGCTT AAGAAGAAAA ATTTTGAGGT TATTTACTTC ACGGATCCAG TTGATGAATA CTTAATGCAA TACCTGATGG
ATTATGAAGA TAAAAAGTTC CAAAATGTGT CCAAGGAGGG TTTGAAACTC GGGAAGGATA CGAAAAACAA GGAACTGAAG
GAATCCTTTA AGGATCTTAC GAAGTGGTGG AAAACTGCTC TATCCAAGGA TAATGTCGAT GATGTGAAGA TATCCAACCG
ATTGGATAAC ACTCCTTGTG TAGTAGTGAC ATCAAAATAT GGTTGGAGTG CAAACATGGA GCGAATCATG CAGTCTCAAA
CTTTGTCAGA TGCTAGCAAG CAAGCATACA TGCGTGGGAA GAGGGTGCTT GAGATCAATC CTAGGCATCC TATTATCAAG
GAGCTCCGCG AGAGAGTAGT AAAGAACCCC GAGGATGAGG GCGTGAAACA AACAGCACAG CTGATGTACC AGACTGCACT
CTTCGAAAGT GGCTTCAATC TTGATGATCC TAAGGATTTC ACTTCCCGTA TTTATGATTC GGTGAAGTCT AGTATGAACA
TCAGTCCTGA TGCAACAGTT GAAGAGGAAG ATGACACCGA GGCGGAGGCT GAAAGTGAGG TAAAAGAAAC TCCAAACAAG
CCTGAAGCTG AAGTTGATGA TGATGTTGAC GATGCGAAAG ACGAGTTGTA G

>Vigan.03G292600.01
MRKWTVASVL LLLCLLFLFA DQGRKFQANA AGDSDGVVDP PKVEDKIGAV PHGLSTDSDV VKREAESISK KSLRSNAEKF
EFQAEVSRLM DIIINSLYSN KDIFLRELIS NASDALDKIR FLSLTDKEVL GEGDNTKLDI QIKLDKEKKI LSIRDRGIGM
TKEDLIKNLG TIAKSGTSAF VEKMQTSGDL NLIGQFGVGF YSVYLVADYV EVISKHNEDK QYVWESKADG AFAISEDTWN
EPLGRGTEIR LHLKEEAGEY LEESKLKELV KRYSEFINFP IYIWASKEVD VEVPADEDDS GDEDDSADGS SKEETEDEDA
DKGEDEDKPK TKTVKETTYE WELLNDVKAI WLRNPKEVTE EEYTKFYHSL AKDFSDEKPL SWSHFTAEGD VEFKAVLFVP
PKAPQDLYES YYNANKSNLK LYVRRVFISD EFDELLPKYL NFLRGLVDSD TLPLNVSREM LQQHNSLKTI KKKLIRKALD
MIRRIADEDP DESSDREKKE DASSDNDEKK GQYVKFWNEF GKSIKLGIIE DATNRNRLAK LLRFESTKSD GKLTSLDQYI
SRMKAGQKDI FYITGTSKEQ LEKSPFLEQL KKKNFEVIYF TDPVDEYLMQ YLMDYEDKKF QNVSKEGLKL GKDTKNKELK
ESFKDLTKWW KTALSKDNVD DVKISNRLDN TPCVVVTSKY GWSANMERIM QSQTLSDASK QAYMRGKRVL EINPRHPIIK
ELRERVVKNP EDEGVKQTAQ LMYQTALFES GFNLDDPKDF TSRIYDSVKS SMNISPDATV EEEDDTEAEA ESEVKETPNK
PEAEVDDDVD DAKDEL*