GBrowse Details

Vigan.04G025800.01

Basic Information:
Name: Vigan.04G025800.01
Multiple alignment
Variant Information
Position: Chr04:2273362..2278389 (- strand)
Length: 5028
Functional Information:
Description: Similar to Uncharacterized protein. [I1LWZ3, Glycine max]
InterPro: PMR5 N-terminal domain (IPR025846)
PC-Esterase (IPR026057)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.12,0.27,9.01,16.32,41.90,48.59,68.53,16.19
Arabidopsis thaliana homolog: AT5G15900.1
Structure :
Position: Chr04:2273362..2273670 (- strand)
Length: 309
Type: three_prime_UTR
Position: Chr04:2273671..2274477 (- strand)
Length: 807
Type: CDS
Position: Chr04:2277769..2278275 (- strand)
Length: 507
Type: CDS
Position: Chr04:2278276..2278389 (- strand)
Length: 114
Type: five_prime_UTR


>Vigan.04G025800.01
CTTAAGTTAA TTTGCACAGA CAAGATATTT TATATAAGAA AAACATCTCC ATTGTTGTAT ACCTTGTATG TGTTTGTTCC
TACCTTTCTC TTCTCTTTCT CCCTCTTTCC AAAAATGAAG TTCCAAATCG TAGAGCTTCT GTTTGGTAAA AGCACCCCAA
AACAAATGAT CCCAAAAGTG ACTTTACTTG CAGTGTTTGC CATACTGCTG TTCACTGTCA CACCACTGTC ATACCCTTTG
TTCAGATACT CTTCATCATC ACTCAAGAAC AAAGAATCCA AGAAGCCATA CTCAGCATTT GATGATCTGA ACGAGTCTGC
GAGCTTGCCT TCGACTTCCA TCAAGAAGTG TGACATTTTC AGTGGAGAAT GGGTTCCAAA CCCAAAGGCT CCATATTACT
CAAACAAAAC ATGCTGGGCT ATTCATGAAC ACCAAAACTG CATGAAGTAT GGTAGACCAG ATTCTGAGTT CATGAAGTGG
AAATGGAAGC CAAATGGATG TGAACTTCCT GTCTTCAACC CTTTCCAGTT TCTTGAACTT GTAAGGGGAA AATCAATGGC
ATTTGTTGGA GACTCAGTTG GCAGAAACCA GATGCAGTCC ATGATTTGCC TCCTATCAAG GGTGGAATGG CCCATAGATG
TATCGTATAA AAGAGATGAT TACTTTATGA GATGGAAGTA CCCAAGTTAC AACTTCACCA TGGCTGCTTT TTGGACAACT
CATTTGGTGA GATCCAAAGA AGCAGATTCA AAGGGGCCAG GCCCAACTGG CCTATGCAAC CTTTACCTTG ACGAGCCAGA
TGAGAAATGG ATAACCCAAA TTGAAGATTT TGACTATGTT ATTCTCAATG GAGGACATTG GTTTACACGT TCAATGGTGT
TCTATGAGAA ACAAAAAATT GTTGGGTGCC ATTACTGCCT CTTGGAGAAT GTCCCTGACT TAACCATGTA CTATGGCTAC
AGAAAGGCTT TCAGGACTGC TTTTAGGGCC ATCAATAGAT TAGAGAACTT CAAAGGCACA GTCTTTCTTA GGACATTTGC
CCCTTCACAT TTTGAAAATG GGTTGTGGAA TCAGGGTGGG AACTGCATTA GAACTAAGCC ATTTAGGAGC AATGAGACAC
AGTTAGAGGG ACTAGATTTG GAGTTTTATA TGATTCAGTT GGAGGAGTTC AAAATTGCTG AAAAGGAAGC AAGAAAAAAG
GGTTTGAAAT ATAGGCTATT TGATGTCACG CAAGCATCGA TGTTGAGACC AGATGGTCAC CCAAGTAGAT ATGGTCATTG
GCCTAATGAA AATGTGACAC TGTACAATGA TTGTGTTCAT TGGTGTTTGC CTGGTCCTAT AGACACATGG AGTGATTTTC
TGCTCGGAAT GTTGAAGATG GAGGGTGTGA GATCGGCTGA AGAGAGGCTT CATTTGCGTT CGAATTGACA AATCAATTTT
ATCAGATATT TCTGTAACCT TGCTTGTAAT TGTAAACTTC ACTGCGCACA TGTATTGTAA ACCTTTTTAA ATTAAGATCG
AATTTGATCA CCCCTTTTAT AGCTTTTTGG TGTTCCTTAT GTTTACACAT TTCAGAATGC AAGTAAGGAC CACTTGAATG
ACAGAACTCA CTATTCAATC TGAAAGGACC ACTTGAACAA ACTCACAGAT GTTCCTCAAA CCAAATGTAG AGATGCACTA
GACATGAATT GGAATTTATA GTAACATGTA GAAATCAAGA AAATTTCTGT TTCTTTA

>Vigan.04G025800.01
ATGAAGTTCC AAATCGTAGA GCTTCTGTTT GGTAAAAGCA CCCCAAAACA AATGATCCCA AAAGTGACTT TACTTGCAGT
GTTTGCCATA CTGCTGTTCA CTGTCACACC ACTGTCATAC CCTTTGTTCA GATACTCTTC ATCATCACTC AAGAACAAAG
AATCCAAGAA GCCATACTCA GCATTTGATG ATCTGAACGA GTCTGCGAGC TTGCCTTCGA CTTCCATCAA GAAGTGTGAC
ATTTTCAGTG GAGAATGGGT TCCAAACCCA AAGGCTCCAT ATTACTCAAA CAAAACATGC TGGGCTATTC ATGAACACCA
AAACTGCATG AAGTATGGTA GACCAGATTC TGAGTTCATG AAGTGGAAAT GGAAGCCAAA TGGATGTGAA CTTCCTGTCT
TCAACCCTTT CCAGTTTCTT GAACTTGTAA GGGGAAAATC AATGGCATTT GTTGGAGACT CAGTTGGCAG AAACCAGATG
CAGTCCATGA TTTGCCTCCT ATCAAGGGTG GAATGGCCCA TAGATGTATC GTATAAAAGA GATGATTACT TTATGAGATG
GAAGTACCCA AGTTACAACT TCACCATGGC TGCTTTTTGG ACAACTCATT TGGTGAGATC CAAAGAAGCA GATTCAAAGG
GGCCAGGCCC AACTGGCCTA TGCAACCTTT ACCTTGACGA GCCAGATGAG AAATGGATAA CCCAAATTGA AGATTTTGAC
TATGTTATTC TCAATGGAGG ACATTGGTTT ACACGTTCAA TGGTGTTCTA TGAGAAACAA AAAATTGTTG GGTGCCATTA
CTGCCTCTTG GAGAATGTCC CTGACTTAAC CATGTACTAT GGCTACAGAA AGGCTTTCAG GACTGCTTTT AGGGCCATCA
ATAGATTAGA GAACTTCAAA GGCACAGTCT TTCTTAGGAC ATTTGCCCCT TCACATTTTG AAAATGGGTT GTGGAATCAG
GGTGGGAACT GCATTAGAAC TAAGCCATTT AGGAGCAATG AGACACAGTT AGAGGGACTA GATTTGGAGT TTTATATGAT
TCAGTTGGAG GAGTTCAAAA TTGCTGAAAA GGAAGCAAGA AAAAAGGGTT TGAAATATAG GCTATTTGAT GTCACGCAAG
CATCGATGTT GAGACCAGAT GGTCACCCAA GTAGATATGG TCATTGGCCT AATGAAAATG TGACACTGTA CAATGATTGT
GTTCATTGGT GTTTGCCTGG TCCTATAGAC ACATGGAGTG ATTTTCTGCT CGGAATGTTG AAGATGGAGG GTGTGAGATC
GGCTGAAGAG AGGCTTCATT TGCGTTCGAA TTGA

>Vigan.04G025800.01
MKFQIVELLF GKSTPKQMIP KVTLLAVFAI LLFTVTPLSY PLFRYSSSSL KNKESKKPYS AFDDLNESAS LPSTSIKKCD
IFSGEWVPNP KAPYYSNKTC WAIHEHQNCM KYGRPDSEFM KWKWKPNGCE LPVFNPFQFL ELVRGKSMAF VGDSVGRNQM
QSMICLLSRV EWPIDVSYKR DDYFMRWKYP SYNFTMAAFW TTHLVRSKEA DSKGPGPTGL CNLYLDEPDE KWITQIEDFD
YVILNGGHWF TRSMVFYEKQ KIVGCHYCLL ENVPDLTMYY GYRKAFRTAF RAINRLENFK GTVFLRTFAP SHFENGLWNQ
GGNCIRTKPF RSNETQLEGL DLEFYMIQLE EFKIAEKEAR KKGLKYRLFD VTQASMLRPD GHPSRYGHWP NENVTLYNDC
VHWCLPGPID TWSDFLLGML KMEGVRSAEE RLHLRSN*