GBrowse Details

Vigan.04G031200.01

Basic Information:
Name: Vigan.04G031200.01
Multiple alignment
Variant Information
Position: Chr04:2661484..2667404 (+ strand)
Length: 5921
Functional Information:
Description: Similar to leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730-like. [XP_003552620.1, Glycine max]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine-threonine/tyrosine-protein kinase catalytic domain (IPR001245)
Serine/threonine- / dual specificity protein kinase, catalytic domain (IPR002290)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Concanavalin A-like lectin/glucanase, subgroup (IPR013320)
Protein kinase, ATP binding site (IPR017441)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:5.65,4.74,2.72,5.56,4.62,3.52,9.63,4.71
Arabidopsis thaliana homolog: AT5G15730.2
Automatic updates:
Name: NM_001254345 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730-like (LOC100792253), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:2661484..2662127 (+ strand)
Length: 644
Type: five_prime_UTR
Position: Chr04:2662128..2662453 (+ strand)
Length: 326
Type: CDS
Position: Chr04:2662705..2662858 (+ strand)
Length: 154
Type: CDS
Position: Chr04:2664378..2664504 (+ strand)
Length: 127
Type: CDS
Position: Chr04:2664676..2664758 (+ strand)
Length: 83
Type: CDS
Position: Chr04:2664832..2664903 (+ strand)
Length: 72
Type: CDS
Position: Chr04:2666457..2666660 (+ strand)
Length: 204
Type: CDS
Position: Chr04:2666775..2667059 (+ strand)
Length: 285
Type: CDS
Position: Chr04:2667060..2667404 (+ strand)
Length: 345
Type: three_prime_UTR


>Vigan.04G031200.01
ACGCAGTCCT TGTGTTTGAA GAAAGACCCA CCAAATTAAT CCGCGTTTTC TCTTTTTGTT TCTTTCCTCT TGAAAGCATG
AAGAAGTCTC CAACTCAGAC CTGTTCATCT ACCTTTTCCA GTTTCAATTT CCATTTTCAC CTTCTTTCTC TCTTCTTCAT
CTCGCCACCT CATTCTTATT AAGCGCAACT ACCACAATGG AAGCAGTATT TCGGAATCAA GGTTCTTTCT GTCCTGATTT
TGCTGTCTGG TTTAGGAAAA AAAAGCTTTT TTTTTTCTGT TGTTGAATTT GGGTCGGTGA GTTTTGAGTT TAATGGATGA
TGATGGGTTT GCTTGGTGGA TGGTTTTATT TCCAATGTTT ATGAGAGTAA AGTGAGTTAT TATTGGGACA CCAACTTTAA
AGTGGTAAAT TATTGAGTCT TTTGGCATGT TAGTAGTTGT TGAATAGTTA AAGCTTTTCT TATTGTATGT TGATTTGTAT
TTTTGCTTAG ACTCGTCTTC AAAGTTGGTT GTGGATAAAG TGCTGAATCG GTGTCTGTTC TAGCTGGATA AAGTAATGAA
TTAGCTTATT GTGGCAGTGG ACCTCTGTAG TGCTGGTCTC ATGCAAGATG ATTGAGAATT TTGAATATCA AGAGAGGTCA
AGGGATGGTT GATCAAGGTG ATTTAGTTGT CATCTGTGTC TCTATTGGAG TGGCCCTTGG GATTTTGATA GCTTGCTTGG
TGTATTTTTG CACAAGGTGG TACAATAAGC GAACTCATCT TAGCCGATCT GCGAATGAGC CTAGTTTAAC AGCTATCCCT
ATACGAACAA ATGGATTAGG AACGAGCACT GACTTCAGTG CTTCACTCAC CAGTTCCATA GCCACTTATA GGTCACCAAA
TCCTCCAAAA AAATCACATC CAGCTGGGCG GAATCATCAG AATAAAGATG GCTTTGCTTC TGTATCAGGC ATTCTGAAGT
ACTCGTACAA GGAAATTCAG AAGGCCACAC AAAATTTCAC AAGTATTTTG GGAGAAGGGT CATTTGGCAC AGTTTATAAA
GCCGTGATGC CTACAGGAGA GGTGGTAGCT GTGAAGATGC TTGCACCCAA TTCCAAACAA GGGGAGAAAG AATTTCTAAC
GGAGGTGCTT CTGCTAGGAA GACTGCATCA TCGGAATCTT GTAAATTTGT TAGGGTACTG CGTAGATAAA GGACAGCTTA
TGCTTGTTTA CGAGTTCATG AGTAATGGAA GTTTAGAAAA CCTTTTATAC GATGAAGAAA AAGAATTGAG TTGGGATGAA
AGGCTGCAAA TTGCTGTTGA TATTTCGCAC GGAATAGAAT ACCTTCATGA AGGGGCAGTA CCACATGTCG TACATCGAGA
TCTGAAATCT GCTAATATTC TGCTAGATCA CTCAATGAGA GCTAAGGTTT CTGATTTCGG GCTCTCAAAG GAAGAGATCT
TTGATGGCCG TAATTCTGGC CTTAAAGGTA CATATGGCTA CATGGACCCA GCATACATTA CCTCGAGCAA GTTCACAGTG
AAGAGTGACA TTTACAGTTT TGGTATAATA ATTTTTGAGC TCATCACTGC CATCCATCCA CATCAAAATT TGATGGAATA
TATCAACCTT GCTGCAATGG ATTACGATGG TGTAGATGGG ATTCTTGACA AGCAACTTGT GGGAAAATGC AGCGTTGAAG
AAGTGAGACA GCTTGCTAAA ATTGCACACA AATGTTTGCA CAAATCACCT AGGAAACGCC CATCTATAAG TGAAGTTTCG
CAGGCTATAT TGGGGATTAG GCAAAGGCAA AGGCGTCTGA TGAAAGAAGA CACCATGTCA TTTGCAAGCA CCAACTTCTC
CCGAAGCATG AGTCAAATAG ATGAGCAACA GGTTGAATTA AGTACAGGGA AATAGGGTGA ACACATATTC ATATATTTTG
TTGTGAAAAT TCTTTTTGGG TTTAGGTTAA GAAAATTTGT ACAAAAAAAT CATTGAATGC CACTATCTGC GTATGTCAGT
CAGGATGTAC AGGTATCAAG GGTGGATCTC ATGCTACCTT GAACATGATT CTTTGGTTTG TGAATGGTCA ATTATCTTGT
GAGTTTTTTA TAGCTAAATT GCACAAACAG ATTCTACATC GAACCATGGA CCATTTACCC ATAAATGTAC GCTTTCTACG
GAACAAATAA AGATGAGATG GCGAATGAAG AAAAGGAAAA GGTTTTATTT TTTTAAAAGA CGAAGAATAT TTGTTTGCTC


>Vigan.04G031200.01
ATGGTTGATC AAGGTGATTT AGTTGTCATC TGTGTCTCTA TTGGAGTGGC CCTTGGGATT TTGATAGCTT GCTTGGTGTA
TTTTTGCACA AGGTGGTACA ATAAGCGAAC TCATCTTAGC CGATCTGCGA ATGAGCCTAG TTTAACAGCT ATCCCTATAC
GAACAAATGG ATTAGGAACG AGCACTGACT TCAGTGCTTC ACTCACCAGT TCCATAGCCA CTTATAGGTC ACCAAATCCT
CCAAAAAAAT CACATCCAGC TGGGCGGAAT CATCAGAATA AAGATGGCTT TGCTTCTGTA TCAGGCATTC TGAAGTACTC
GTACAAGGAA ATTCAGAAGG CCACACAAAA TTTCACAAGT ATTTTGGGAG AAGGGTCATT TGGCACAGTT TATAAAGCCG
TGATGCCTAC AGGAGAGGTG GTAGCTGTGA AGATGCTTGC ACCCAATTCC AAACAAGGGG AGAAAGAATT TCTAACGGAG
GTGCTTCTGC TAGGAAGACT GCATCATCGG AATCTTGTAA ATTTGTTAGG GTACTGCGTA GATAAAGGAC AGCTTATGCT
TGTTTACGAG TTCATGAGTA ATGGAAGTTT AGAAAACCTT TTATACGATG AAGAAAAAGA ATTGAGTTGG GATGAAAGGC
TGCAAATTGC TGTTGATATT TCGCACGGAA TAGAATACCT TCATGAAGGG GCAGTACCAC ATGTCGTACA TCGAGATCTG
AAATCTGCTA ATATTCTGCT AGATCACTCA ATGAGAGCTA AGGTTTCTGA TTTCGGGCTC TCAAAGGAAG AGATCTTTGA
TGGCCGTAAT TCTGGCCTTA AAGGTACATA TGGCTACATG GACCCAGCAT ACATTACCTC GAGCAAGTTC ACAGTGAAGA
GTGACATTTA CAGTTTTGGT ATAATAATTT TTGAGCTCAT CACTGCCATC CATCCACATC AAAATTTGAT GGAATATATC
AACCTTGCTG CAATGGATTA CGATGGTGTA GATGGGATTC TTGACAAGCA ACTTGTGGGA AAATGCAGCG TTGAAGAAGT
GAGACAGCTT GCTAAAATTG CACACAAATG TTTGCACAAA TCACCTAGGA AACGCCCATC TATAAGTGAA GTTTCGCAGG
CTATATTGGG GATTAGGCAA AGGCAAAGGC GTCTGATGAA AGAAGACACC ATGTCATTTG CAAGCACCAA CTTCTCCCGA
AGCATGAGTC AAATAGATGA GCAACAGGTT GAATTAAGTA CAGGGAAATA G

>Vigan.04G031200.01
MVDQGDLVVI CVSIGVALGI LIACLVYFCT RWYNKRTHLS RSANEPSLTA IPIRTNGLGT STDFSASLTS SIATYRSPNP
PKKSHPAGRN HQNKDGFASV SGILKYSYKE IQKATQNFTS ILGEGSFGTV YKAVMPTGEV VAVKMLAPNS KQGEKEFLTE
VLLLGRLHHR NLVNLLGYCV DKGQLMLVYE FMSNGSLENL LYDEEKELSW DERLQIAVDI SHGIEYLHEG AVPHVVHRDL
KSANILLDHS MRAKVSDFGL SKEEIFDGRN SGLKGTYGYM DPAYITSSKF TVKSDIYSFG IIIFELITAI HPHQNLMEYI
NLAAMDYDGV DGILDKQLVG KCSVEEVRQL AKIAHKCLHK SPRKRPSISE VSQAILGIRQ RQRRLMKEDT MSFASTNFSR
SMSQIDEQQV ELSTGK*