GBrowse Details

Vigan.04G034800.01

Basic Information:
Name: Vigan.04G034800.01
Multiple alignment
Variant Information
Position: Chr04:2989092..2993491 (+ strand)
Length: 4400
Functional Information:
Description: Similar to Cytochrome P450 85A. [Q69F95, Phaseolus vulgaris]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: iron ion binding (GO:0005506)
Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705)
Molecular Function: heme binding (GO:0020037)
InterPro: Cytochrome P450 (IPR001128)
Cytochrome P450, E-class, group I (IPR002401)
Cytochrome P450, conserved site (IPR017972)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.66,5.63,3.58,10.01,1.01,6.02,1.37,3.05
Arabidopsis thaliana homolog: AT3G30180.1, AT5G38970.1
Automatic updates:
Name: NM_001254983 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max cytochrome P450 85A-like (LOC100785414), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:2989092..2989588 (+ strand)
Length: 497
Type: five_prime_UTR
Position: Chr04:2989589..2989779 (+ strand)
Length: 191
Type: CDS
Position: Chr04:2990573..2990894 (+ strand)
Length: 322
Type: CDS
Position: Chr04:2990995..2991144 (+ strand)
Length: 150
Type: CDS
Position: Chr04:2991538..2991783 (+ strand)
Length: 246
Type: CDS
Position: Chr04:2991869..2991955 (+ strand)
Length: 87
Type: CDS
Position: Chr04:2992087..2992165 (+ strand)
Length: 79
Type: CDS
Position: Chr04:2992517..2992623 (+ strand)
Length: 107
Type: CDS
Position: Chr04:2992728..2992852 (+ strand)
Length: 125
Type: CDS
Position: Chr04:2993006..2993099 (+ strand)
Length: 94
Type: CDS
Position: Chr04:2993100..2993491 (+ strand)
Length: 392
Type: three_prime_UTR


>Vigan.04G034800.01
CAAAACCTTA TACAAAAAGA AGCTTGGCTC AGTAAATAGT TTACTGTTAT ATACTTCATT GAACAATCAT CAATCAACAT
CCTTCCAACC GACCCTTCCT TTCTTCTCTT CCTTCTATAA AGGCAGCAAA GGTTTCTGGC TTAAAATCTG TATTTTTTAT
ACACAAATCA TCGTAGGTTG CTAATGTCTG CTGAGTTGAG TTGTGCACTC CCCTGACATC CTCTCCAAAA GGCAACTCCT
TTTTTCCAAC CCTATAATCT CCAATCCATT TTCTTTTTTC TTTGTGTCTT CACTTTTCAA TTTTTTTAAT CTTCAAGGCC
TACAATAGGG GATGCCACTA GACCATAGAG TGGCGGTTTT TTTCTATGTA GCTATTCTTG TTATATGCAA ATGGTAGCTC
AAGGACCTAT ATATATGTGT GTGTATGTTG GTGCACTTCT CGTGACTTCA ACTGAAGCAG GCTGTTGCTA TCTTCAAGTC
TCTTCTTGAA GGCACCAATG GCTTTGTTCA TGGCAATTCT TGGCGTTGTT GTGTTGGTGC TCTGTTTTTG CTCTGTTCTC
TTGAAGTGGA ATGGAGTGAG ATACAGGAGG AAAGGCTTGC CTCCTGGCGC AATGGGTTGG CCAGTTTTTG GGGAGACAAC
TGAGTTTCTC AAGCAAGGTC CAAACTTCAT GAAGAACAAG AGGGCAAGGT ATGGCAGTTT TTTCAAATCT CACATTCTGG
GGTGTCCTAC CATTGTATGC ATGGATCCGG AGCTGAACAG ATTCATACTG ATGAATGAAG CAAAAGGGCT TGTTCCTGGG
TACCCACAAT CCATGTTAGA TATCTTAGGC ACACGCAATA TTGCAGCTGT TCATGGCTCC ACTCACAAGT ACATGAGAGG
GGCACTGCTC TCAATTATTA GCCCCACCTT GATCAGGGAT CAGCTTTTAC CAAAAATTGA TGAGTTCATG AGAACCCACT
TGATTGATTG GGATAACAAA GTCATAAACA TCCAGGAGAA AACTAAAGAG ATGGCTTTTC TCTCTTCCCT GAAGCAGATT
GCTGGTATGG AATCCAGCTC AATAGCTCAA CCCTTCATGA CAGAGTTCTT CAAACTAGTT TTGGGAACAC TCTCTTTGCC
TATTAACCTT CCTGGCACAA ATTATCGCGG TGGATTGCAG GCAAGGAAAA GTATTATCAG CATTCTGAGT CAGTTGCTGA
AGGAAAGGAT AGCATCCCAA GAATCCCACG TGGACATGCT GGGTTGCTTG ATGAATAGAG ATGAAAACCG ATACAAACTA
ACTGATGAGG AAATCATTGA TTTAGTTATT ACTATTATGT ATTCTGGTTA CGAAACTGTT TCAACCACAT CGATGATGGC
AGTGAAGTAT CTCCATGACC ATCCCAAAGT TCTTGAAGAA ATCAGAAAAG AGCATTTTGC CATAAGGGAA AGGAAAAAGC
CAGAGGATCC AATTGACTGT AATGATCTCA AGTCAATGAG GTTTACTCGT GCGGTGATTT TCGAGACCTC GAGATTAGCA
ACAATAGTTA ACGGGGTTCT AAGAAAAACA ACTCACGACA TGGAGCTAAA CGGGTATCTG ATTCCTAAAG GGTGGAGGAT
ATATGTATAT ACAAGAGAGA TCAACTATGA TCCATTTCTG TATCATGATC CACTGACCTT CAATCCATGG AGATGGCTGG
GTAACAGTCT GGAGTCACAA AGCCACTTCT TGATTTTTGG AGGGGGCACC AGACAATGTC CAGGGAAGGA GTTAGGGATA
GCAGAAATTT CCACTTTCTT GCACTACTTT GTAACAAGAT ACAGGTGGGA AGAAGTAGGA GGAGATAAAC TAATGAAGTT
TCCTAGAGTT GTCGCACCAA ATGGACTGCA CATAAGGGTC TCATCTTTTA CTAGCTAGGC TTTGCGCATG TACAGTACTG
AGATATAGGA AATAGTAGGC TCCAAGGGTT CCTTTGTATG ATAATATGCT CTAACAAGTA GAGAAATCAA TCAAAATTAG
CTTCTTTTTC CATTCTTGTT TTCCTTCTTC CTTTAATTTG AGCAACATTT TTAAGGTGCA ATGAACAAAT CTGGGGGAGT
GTTATAGGCC TGAGTTGTCA GTACTGAGGC CTAGCCCATG CTTAATAAGT AAAGCTTTGA GAGTATAACA TGGTTTGGTC
AAAGCTAGAG GCTAGTGTGC CACACTCTAA GATGCTCCTT TCCCTTTCAA ATGTTGCACA CTTGGTCAAC ATGGGCTAGG
CCCTATATAA ACTCTTGGGC TCGGCTTTCA AAGCCCATGT CCATTTCAAA 

>Vigan.04G034800.01
ATGGCTTTGT TCATGGCAAT TCTTGGCGTT GTTGTGTTGG TGCTCTGTTT TTGCTCTGTT CTCTTGAAGT GGAATGGAGT
GAGATACAGG AGGAAAGGCT TGCCTCCTGG CGCAATGGGT TGGCCAGTTT TTGGGGAGAC AACTGAGTTT CTCAAGCAAG
GTCCAAACTT CATGAAGAAC AAGAGGGCAA GGTATGGCAG TTTTTTCAAA TCTCACATTC TGGGGTGTCC TACCATTGTA
TGCATGGATC CGGAGCTGAA CAGATTCATA CTGATGAATG AAGCAAAAGG GCTTGTTCCT GGGTACCCAC AATCCATGTT
AGATATCTTA GGCACACGCA ATATTGCAGC TGTTCATGGC TCCACTCACA AGTACATGAG AGGGGCACTG CTCTCAATTA
TTAGCCCCAC CTTGATCAGG GATCAGCTTT TACCAAAAAT TGATGAGTTC ATGAGAACCC ACTTGATTGA TTGGGATAAC
AAAGTCATAA ACATCCAGGA GAAAACTAAA GAGATGGCTT TTCTCTCTTC CCTGAAGCAG ATTGCTGGTA TGGAATCCAG
CTCAATAGCT CAACCCTTCA TGACAGAGTT CTTCAAACTA GTTTTGGGAA CACTCTCTTT GCCTATTAAC CTTCCTGGCA
CAAATTATCG CGGTGGATTG CAGGCAAGGA AAAGTATTAT CAGCATTCTG AGTCAGTTGC TGAAGGAAAG GATAGCATCC
CAAGAATCCC ACGTGGACAT GCTGGGTTGC TTGATGAATA GAGATGAAAA CCGATACAAA CTAACTGATG AGGAAATCAT
TGATTTAGTT ATTACTATTA TGTATTCTGG TTACGAAACT GTTTCAACCA CATCGATGAT GGCAGTGAAG TATCTCCATG
ACCATCCCAA AGTTCTTGAA GAAATCAGAA AAGAGCATTT TGCCATAAGG GAAAGGAAAA AGCCAGAGGA TCCAATTGAC
TGTAATGATC TCAAGTCAAT GAGGTTTACT CGTGCGGTGA TTTTCGAGAC CTCGAGATTA GCAACAATAG TTAACGGGGT
TCTAAGAAAA ACAACTCACG ACATGGAGCT AAACGGGTAT CTGATTCCTA AAGGGTGGAG GATATATGTA TATACAAGAG
AGATCAACTA TGATCCATTT CTGTATCATG ATCCACTGAC CTTCAATCCA TGGAGATGGC TGGGTAACAG TCTGGAGTCA
CAAAGCCACT TCTTGATTTT TGGAGGGGGC ACCAGACAAT GTCCAGGGAA GGAGTTAGGG ATAGCAGAAA TTTCCACTTT
CTTGCACTAC TTTGTAACAA GATACAGGTG GGAAGAAGTA GGAGGAGATA AACTAATGAA GTTTCCTAGA GTTGTCGCAC
CAAATGGACT GCACATAAGG GTCTCATCTT TTACTAGCTA G

>Vigan.04G034800.01
MALFMAILGV VVLVLCFCSV LLKWNGVRYR RKGLPPGAMG WPVFGETTEF LKQGPNFMKN KRARYGSFFK SHILGCPTIV
CMDPELNRFI LMNEAKGLVP GYPQSMLDIL GTRNIAAVHG STHKYMRGAL LSIISPTLIR DQLLPKIDEF MRTHLIDWDN
KVINIQEKTK EMAFLSSLKQ IAGMESSSIA QPFMTEFFKL VLGTLSLPIN LPGTNYRGGL QARKSIISIL SQLLKERIAS
QESHVDMLGC LMNRDENRYK LTDEEIIDLV ITIMYSGYET VSTTSMMAVK YLHDHPKVLE EIRKEHFAIR ERKKPEDPID
CNDLKSMRFT RAVIFETSRL ATIVNGVLRK TTHDMELNGY LIPKGWRIYV YTREINYDPF LYHDPLTFNP WRWLGNSLES
QSHFLIFGGG TRQCPGKELG IAEISTFLHY FVTRYRWEEV GGDKLMKFPR VVAPNGLHIR VSSFTS*