GBrowse Details

Vigan.04G045600.01

Basic Information:
Name: Vigan.04G045600.01
Multiple alignment
Variant Information
Position: Chr04:4134819..4140227 (+ strand)
Length: 5409
Functional Information:
Description: Similar to Uncharacterized protein. [I1N4H1, Glycine max]
GO: Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700)
Molecular Function: sequence-specific DNA binding (GO:0043565)
InterPro: DNA-binding WRKY (IPR003657)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:120.93,45.74,17.02,28.05,14.06,15.77,10.07,11.84
Arabidopsis thaliana homolog: AT1G13960.1
Automatic updates:
Name: BK005842 NCBI(nuccore)
Organism: Glycine max
Description: TPA_inf: Glycine max transcription factor WRKY4 mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: EU375355 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max transcription factor (WRKY4) mRNA, complete cds.
PubMed ID: 18384508 NCBI(pubmed)
Status: Known Variant
Name: NM_001250726 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max WRKY transcription factor 4 (WRKY4), mRNA.
PubMed ID: 18384508 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr04:4134819..4134918 (+ strand)
Length: 100
Type: five_prime_UTR
Position: Chr04:4134919..4135305 (+ strand)
Length: 387
Type: CDS
Position: Chr04:4136337..4137064 (+ strand)
Length: 728
Type: CDS
Position: Chr04:4137150..4137308 (+ strand)
Length: 159
Type: CDS
Position: Chr04:4139583..4139865 (+ strand)
Length: 283
Type: CDS
Position: Chr04:4139866..4140227 (+ strand)
Length: 362
Type: three_prime_UTR


>Vigan.04G045600.01
AGAGAAGATA ACAACACAAA ACGAAACCCA TAGTTTCGTG CCTTTCTCGC ACTATCTATC CATTTTATTT TCTCTTCCAT
AATTTTCTCA CCCACCACCC ATGTCCACTC CCAACGCCGA CTCCGGCATG GCGCCGCATC CGCGCCCCAC CATCACACTT
CCTCCTCGTC CCTCCGCGGA GGCCTTTTTC TCCGCCGCTG GCGGCGCTAG CCCCGGTCCC ATGACCCTCG TCTCCAGCTT
CTTCGGTTCT GATGCCGCCG CCGACTGTCG CTCCTTCTCC CAGCTTCTTG CTGGCGCCAT GGCCTCCCCG ATGGCCTTCT
CTGCCACCGT GGCCGACAAC TCCGACAAGG ACGATGATGG GCCCCACAAG GGCTTCAAGC AGAGCAGACC CATGAATTTG
GTCATTGCTC GTTCCCCTGT CTTCACTGTT CCACCCGGGT TGAGCCCTTC TGGGTTTCTT AACTCTCCTG GCTTCTTTTC
CCCTCAGAGC CCCTTTGGGA TGTCTCACCA ACAGGCTTTA GCACAGGTTA CAGCTCAAGC TGTCCTAGCG CAATCTCATA
TGCACATGCA AGCTGATTAC CAGATGCATC CAGTAACTGC CCCTACTGAA CCACCTGTAC AACAGCCATC TTTTGCTCTA
AATGAAGCTT CAGAGCAGAA AATAGTTCCA TCTGTATCAG AAGCTAAAAA TGCTCAACTG GAAACGTCGG ATATCTCACA
GGCTGATAAG AAATATCAGC TGGCTTCTCA GGCCATTGAC AAGCCTGCAG ATGATGGCTA CAACTGGCGC AAGTATGGGC
AGAAGCAGGT TAAAGGCAGC GAGTATCCAA GGAGCTACTA CAAATGTACA CATCTGAATT GCCTAGTGAA GAAAAAAGTT
GAGCGTGCCC CTGATGGACA CATAACTGAA ATTATATATA AAGGTCAGCA TAACCATGAA AAGCCTCAGG CAAATAGACG
TGTCAAGGAT AATAGTGATT CAAATGGAAG TGCAATTGTT CAGCCTAAGT CTGAGTCAAA CTCACAAGGT TGGGTTGGAC
AACAAGTAAA CAAGTTTAGT GAAAACATTC CTGATTGTTC AGTTCCTGAA AGTGACCAGA TCTCCAATCA AGGGGCACCT
AGGCAACTAC TACCTGGGTC AAGTGGGAGC GAGGAAGTGG GTGATGTAGA TAATAGGGAA GAGGCGGATG ACATTGAGCC
AAACCCTAAG AGAAGGAATA CTGATGTTGC GGTTTCTGAA GTACCTCTTT CTCAGAAGAC TGTCACAGAA CCCAAAATTA
TTGTGCAAAC AAGAAGCGAA GTTGATCTTT TGGATGATGG TTACAGGTGG AGAAAGTATG GTCAAAAAGT GGTGAAGGGA
AATCCTCATC CGAGGAGTTA TTACAAATGC ACAAGTGCAG GATGCAACGT GCGTAAGCAT GTTGAGAGAG CTTCAACCGA
CCCCAAAGCT GTCATAACCA CGTACGAGGG TAAGCATAAT CATGATGTGC CTGCTGCTAG AAATAGCAGC CACAACACAG
CTAATACAAA TTCAGTGCCA TTAAAACCGC ACAATGTCGT ACCGGAGAAG CACCCTTTAC TTAAAGACAT GGATTTTGGA
AGCAATGACC AAAGGCCTGT ACATTTGCGC TTAAAAGAAG AGCAAATCAT AGTATAAAAG TGTGGCGTCG TGATTACTCA
TTCCACCTAA AGTACAGAAT GAAGTTGTCT AGAAGATGAA ATGGATAATA CAAAGGTGTA GTCACTAGTC AGTTGGCAAT
GGTCAGTGCA TGTTTATTGT TTTCTATTTT CACTGTATGT AACACCTTTT GTACATCTAA ATTATGGAAT TGGTTGTATA
AGATATCGTT TACAGGTATG AAGATCATTT AAGCTAATGT ACGAACATTA TTATATAATT TATAAAATAC TCCTTGTAAG
CTGTAAGGCA GTTCTAGAGA GTACAAATAA TTGGAATGCT TGTACTGAAT TCCTTTTTAT ATGTTATGGA AGTTTAAAGA
ATGACTTTGA TAACTCCAA

>Vigan.04G045600.01
ATGTCCACTC CCAACGCCGA CTCCGGCATG GCGCCGCATC CGCGCCCCAC CATCACACTT CCTCCTCGTC CCTCCGCGGA
GGCCTTTTTC TCCGCCGCTG GCGGCGCTAG CCCCGGTCCC ATGACCCTCG TCTCCAGCTT CTTCGGTTCT GATGCCGCCG
CCGACTGTCG CTCCTTCTCC CAGCTTCTTG CTGGCGCCAT GGCCTCCCCG ATGGCCTTCT CTGCCACCGT GGCCGACAAC
TCCGACAAGG ACGATGATGG GCCCCACAAG GGCTTCAAGC AGAGCAGACC CATGAATTTG GTCATTGCTC GTTCCCCTGT
CTTCACTGTT CCACCCGGGT TGAGCCCTTC TGGGTTTCTT AACTCTCCTG GCTTCTTTTC CCCTCAGAGC CCCTTTGGGA
TGTCTCACCA ACAGGCTTTA GCACAGGTTA CAGCTCAAGC TGTCCTAGCG CAATCTCATA TGCACATGCA AGCTGATTAC
CAGATGCATC CAGTAACTGC CCCTACTGAA CCACCTGTAC AACAGCCATC TTTTGCTCTA AATGAAGCTT CAGAGCAGAA
AATAGTTCCA TCTGTATCAG AAGCTAAAAA TGCTCAACTG GAAACGTCGG ATATCTCACA GGCTGATAAG AAATATCAGC
TGGCTTCTCA GGCCATTGAC AAGCCTGCAG ATGATGGCTA CAACTGGCGC AAGTATGGGC AGAAGCAGGT TAAAGGCAGC
GAGTATCCAA GGAGCTACTA CAAATGTACA CATCTGAATT GCCTAGTGAA GAAAAAAGTT GAGCGTGCCC CTGATGGACA
CATAACTGAA ATTATATATA AAGGTCAGCA TAACCATGAA AAGCCTCAGG CAAATAGACG TGTCAAGGAT AATAGTGATT
CAAATGGAAG TGCAATTGTT CAGCCTAAGT CTGAGTCAAA CTCACAAGGT TGGGTTGGAC AACAAGTAAA CAAGTTTAGT
GAAAACATTC CTGATTGTTC AGTTCCTGAA AGTGACCAGA TCTCCAATCA AGGGGCACCT AGGCAACTAC TACCTGGGTC
AAGTGGGAGC GAGGAAGTGG GTGATGTAGA TAATAGGGAA GAGGCGGATG ACATTGAGCC AAACCCTAAG AGAAGGAATA
CTGATGTTGC GGTTTCTGAA GTACCTCTTT CTCAGAAGAC TGTCACAGAA CCCAAAATTA TTGTGCAAAC AAGAAGCGAA
GTTGATCTTT TGGATGATGG TTACAGGTGG AGAAAGTATG GTCAAAAAGT GGTGAAGGGA AATCCTCATC CGAGGAGTTA
TTACAAATGC ACAAGTGCAG GATGCAACGT GCGTAAGCAT GTTGAGAGAG CTTCAACCGA CCCCAAAGCT GTCATAACCA
CGTACGAGGG TAAGCATAAT CATGATGTGC CTGCTGCTAG AAATAGCAGC CACAACACAG CTAATACAAA TTCAGTGCCA
TTAAAACCGC ACAATGTCGT ACCGGAGAAG CACCCTTTAC TTAAAGACAT GGATTTTGGA AGCAATGACC AAAGGCCTGT
ACATTTGCGC TTAAAAGAAG AGCAAATCAT AGTATAA

>Vigan.04G045600.01
MSTPNADSGM APHPRPTITL PPRPSAEAFF SAAGGASPGP MTLVSSFFGS DAAADCRSFS QLLAGAMASP MAFSATVADN
SDKDDDGPHK GFKQSRPMNL VIARSPVFTV PPGLSPSGFL NSPGFFSPQS PFGMSHQQAL AQVTAQAVLA QSHMHMQADY
QMHPVTAPTE PPVQQPSFAL NEASEQKIVP SVSEAKNAQL ETSDISQADK KYQLASQAID KPADDGYNWR KYGQKQVKGS
EYPRSYYKCT HLNCLVKKKV ERAPDGHITE IIYKGQHNHE KPQANRRVKD NSDSNGSAIV QPKSESNSQG WVGQQVNKFS
ENIPDCSVPE SDQISNQGAP RQLLPGSSGS EEVGDVDNRE EADDIEPNPK RRNTDVAVSE VPLSQKTVTE PKIIVQTRSE
VDLLDDGYRW RKYGQKVVKG NPHPRSYYKC TSAGCNVRKH VERASTDPKA VITTYEGKHN HDVPAARNSS HNTANTNSVP
LKPHNVVPEK HPLLKDMDFG SNDQRPVHLR LKEEQIIV*