GBrowse Details

Vigan.04G054300.01

Basic Information:
Name: Vigan.04G054300.01
Multiple alignment
Variant Information
Position: Chr04:4955840..4960206 (- strand)
Length: 4367
Functional Information:
Description: Similar to Uncharacterized protein. [C6ZRP0, Glycine max]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Protein kinase, ATP binding site (IPR017441)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.04,5.36,16.09,10.00,14.52,11.28,39.32,16.63
Arabidopsis thaliana homolog: AT3G01300.1, AT3G28690.2, AT5G15080.1
Automatic updates:
Name: NM_001251593 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max serine/threonine protein kinase-like protein (LOC100305393), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:4955840..4956324 (- strand)
Length: 485
Type: three_prime_UTR
Position: Chr04:4956325..4956830 (- strand)
Length: 506
Type: CDS
Position: Chr04:4957518..4957641 (- strand)
Length: 124
Type: CDS
Position: Chr04:4957727..4957866 (- strand)
Length: 140
Type: CDS
Position: Chr04:4958245..4958380 (- strand)
Length: 136
Type: CDS
Position: Chr04:4958479..4958816 (- strand)
Length: 338
Type: CDS
Position: Chr04:4959502..4959685 (- strand)
Length: 184
Type: CDS
Position: Chr04:4959686..4960206 (- strand)
Length: 521
Type: five_prime_UTR


>Vigan.04G054300.01
ATAAAGTCAA ACAAATAAGA GGAAAGTAGA TATTGTAAGT TGTAACTAGG AAGTGCTCTT CTCAAAAAAG CAAAAACATA
AAGAAATGGC TGTCACTTTC TCTCTCCTGC CCGCACTGCC CGGCTGCCAA CTTTCACATT TGAAGCCTAC CCGGCCGGCC
CGTTGTTGAA AAACTCTCTT TTTCACATGC AGTTTCCCAT TGCCTCTCTC CTCCACCACC TACACCCCTT CTGGACTGAT
TTTCAGAACT GGTTTTGTGT GTGTTTGTTT TTTACCCATT TATCTGTGTA CTTGTGTTGA TCCTTTTGTT CTGATTCACT
ACAGTGATGT TCTTCTTTTA GTTCTGTTGA TTGTGACTGT GATCACGGTC GTGATCATCA TATGGGTTGC AGAGTCTTCA
ATTATTGGAA GTGGGTTTGC TTGAACAGGC TTTTTATTTC CGTTTTTCCT TTTTGAATCC TAAAGTCGGA AACTTGTGGG
GACTTTGAGC ATGAAAAGCT CTTTCTAAGA CTTTGTGGAA GATGGGGTTT GGGAATAATG CAATTCAAGC AGGGAGTTTG
GATGTGGGGA AGTCAAAGGT AAAGATGCAA AAGGCTGGTG CAGACAAGGA AATTGGGTGC TGTGTTAAAT TCTGTTTCAT
TGGGAGCTGT ATACCTTCAA GATCAAAGGT TGATACTTCC ATAAGTGGCA CTAGTGCTAA CAGTGTGGAA AAAACATCTG
CATATGAGAA AAAAAAGAAG GAAACAAATG CTCTTCCAGG GTCCTCTACA ACAACCAGTA ATGCAGAAAG TATCCCTTCC
ACCCCAAAAT TCAGTGAGGA GTTGAAGGTT TCTTCTCGTT TGAGAAAATT TACATTCAAT GAGCTTAAAT TGGCCACTAG
GAATTTCAGA CCAGAGAGTC TTCTTGGTGA AGGAGGGTTT GGATGTGTTT TCAAGGGTTG GATCGAAGAA AATGGTACTG
CACCTGTGAA ACCTGGTACC GGGCTTACTG TAGCTGTGAA AACTCTCAAC CATGATGGGC TTCAGGGTCA CAAAGAGTGG
CTTGCAGAGT TAGACATTCT TGGTGACCTC GTCCATCCGA ATCTGGTCAA ATTGGTTGGT TTCTGTATTG AAGATGACCA
AAGATTGTTG GTTTATGAAT GCATGCCCCG TGGAAGTTTG GAGAACCACC TCTTCAGAAA AGGGTCGTTG CCTCTTCCTT
GGTCTATCAG AATGAAAATT GCACTTGGTG CTGCAAAAGG TCTTTCTTTT CTCCATGAAG AAGCTCAGCG ACCTGTAATA
TATCGTGATT TTAAGACATC TAATATTCTG TTGGATGCGG AATACAATGC AAAGCTCTCT GATTTTGGAC TCGCCAAAGA
TGGTCCTGAA GGGGAAAAGA CACACATATC AACAAGAGTC ATGGGAACAT ATGGTTATGC AGCTCCTGAG TATGTGATGA
CTGGACACTT GACATCAAAA AGTGATGTCT ATAGTTTTGG AGTAGTACTG CTGGAAATGC TGACCGGCCG GCGATCCATC
GATAAGAACA GACCAAATGG GGAACACAAT CTTGTGGAGT GGGCAAGGCC TGTGCTTGGC GACAGGAGGA TGTTACTACG
GATCATTGAT CCTCGCCTTG AAGGTCACTT CTCTGTTAAA GGGGCACAGA AGGCTGCACA GCTGGCTGCT CAATGCCTTT
GCCGTGATCC AAAATCCAGA CCTATGATGA GTGATGTAGT TCATGCTCTG AAGCATTTGC AAAACCTCAA GGATATGGCC
ATCTCAACTT ATCATTTCCA AGTTGCACGA GTGGATCGAA CCATGTCCAT GCCAACTTCT AAAAATGGTA TGCAAGCACA
GTTAACAATA ACAAGGAAGG GTCAAGCTGC AAGGTCCTTG TCAAGTCCAA AAGGCCCTCA TGGTTCTCCT TATCATCATT
ATATCAAGTC TCCAAAACCA AATGGATAAT GATATCATGG TTGTGTCTTT GATTTGCTTT TCTATTCATT CAGTTCCCTC
AAGTTAGGCT ATCAGCTGAA CAGAAACTGT TTGTGTTTTT AAAAATGCTC TGAAATTTGA GGAATCATTA GAGTTTTCTG
ACCTTATATT GTCTCAAATA AGGTGGGGGA TGGTGGGGAC CATGATACAG TTTCCTGGAC TACAAAGTTT AGTGGGGACT
GAATTGACCA AACTTGAAGA GAAAACTATA CAGTTTTCAC ATGGATAATT TGTTACTGTG AAGTTGCTAT ACTTTTTCTA
CCATTTCACA GGCTTTCTTC TGCCTTTCAG AATGTATTTT TGTAAAGAAA ACAGGATGGT GGTGTTAACT CATGTTATTC
ATAGAGATTT TCACATACTA ATTCGTCAAT ATACTTTCAG TTAATACTTA TCAGTGTAAT TAAGTGTTGT ACTAAATATG
CTACAGTTTG GAATTTCAAC CACTTAAAAG GTTC

>Vigan.04G054300.01
ATGGGGTTTG GGAATAATGC AATTCAAGCA GGGAGTTTGG ATGTGGGGAA GTCAAAGGTA AAGATGCAAA AGGCTGGTGC
AGACAAGGAA ATTGGGTGCT GTGTTAAATT CTGTTTCATT GGGAGCTGTA TACCTTCAAG ATCAAAGGTT GATACTTCCA
TAAGTGGCAC TAGTGCTAAC AGTGTGGAAA AAACATCTGC ATATGAGAAA AAAAAGAAGG AAACAAATGC TCTTCCAGGG
TCCTCTACAA CAACCAGTAA TGCAGAAAGT ATCCCTTCCA CCCCAAAATT CAGTGAGGAG TTGAAGGTTT CTTCTCGTTT
GAGAAAATTT ACATTCAATG AGCTTAAATT GGCCACTAGG AATTTCAGAC CAGAGAGTCT TCTTGGTGAA GGAGGGTTTG
GATGTGTTTT CAAGGGTTGG ATCGAAGAAA ATGGTACTGC ACCTGTGAAA CCTGGTACCG GGCTTACTGT AGCTGTGAAA
ACTCTCAACC ATGATGGGCT TCAGGGTCAC AAAGAGTGGC TTGCAGAGTT AGACATTCTT GGTGACCTCG TCCATCCGAA
TCTGGTCAAA TTGGTTGGTT TCTGTATTGA AGATGACCAA AGATTGTTGG TTTATGAATG CATGCCCCGT GGAAGTTTGG
AGAACCACCT CTTCAGAAAA GGGTCGTTGC CTCTTCCTTG GTCTATCAGA ATGAAAATTG CACTTGGTGC TGCAAAAGGT
CTTTCTTTTC TCCATGAAGA AGCTCAGCGA CCTGTAATAT ATCGTGATTT TAAGACATCT AATATTCTGT TGGATGCGGA
ATACAATGCA AAGCTCTCTG ATTTTGGACT CGCCAAAGAT GGTCCTGAAG GGGAAAAGAC ACACATATCA ACAAGAGTCA
TGGGAACATA TGGTTATGCA GCTCCTGAGT ATGTGATGAC TGGACACTTG ACATCAAAAA GTGATGTCTA TAGTTTTGGA
GTAGTACTGC TGGAAATGCT GACCGGCCGG CGATCCATCG ATAAGAACAG ACCAAATGGG GAACACAATC TTGTGGAGTG
GGCAAGGCCT GTGCTTGGCG ACAGGAGGAT GTTACTACGG ATCATTGATC CTCGCCTTGA AGGTCACTTC TCTGTTAAAG
GGGCACAGAA GGCTGCACAG CTGGCTGCTC AATGCCTTTG CCGTGATCCA AAATCCAGAC CTATGATGAG TGATGTAGTT
CATGCTCTGA AGCATTTGCA AAACCTCAAG GATATGGCCA TCTCAACTTA TCATTTCCAA GTTGCACGAG TGGATCGAAC
CATGTCCATG CCAACTTCTA AAAATGGTAT GCAAGCACAG TTAACAATAA CAAGGAAGGG TCAAGCTGCA AGGTCCTTGT
CAAGTCCAAA AGGCCCTCAT GGTTCTCCTT ATCATCATTA TATCAAGTCT CCAAAACCAA ATGGATAA

>Vigan.04G054300.01
MGFGNNAIQA GSLDVGKSKV KMQKAGADKE IGCCVKFCFI GSCIPSRSKV DTSISGTSAN SVEKTSAYEK KKKETNALPG
SSTTTSNAES IPSTPKFSEE LKVSSRLRKF TFNELKLATR NFRPESLLGE GGFGCVFKGW IEENGTAPVK PGTGLTVAVK
TLNHDGLQGH KEWLAELDIL GDLVHPNLVK LVGFCIEDDQ RLLVYECMPR GSLENHLFRK GSLPLPWSIR MKIALGAAKG
LSFLHEEAQR PVIYRDFKTS NILLDAEYNA KLSDFGLAKD GPEGEKTHIS TRVMGTYGYA APEYVMTGHL TSKSDVYSFG
VVLLEMLTGR RSIDKNRPNG EHNLVEWARP VLGDRRMLLR IIDPRLEGHF SVKGAQKAAQ LAAQCLCRDP KSRPMMSDVV
HALKHLQNLK DMAISTYHFQ VARVDRTMSM PTSKNGMQAQ LTITRKGQAA RSLSSPKGPH GSPYHHYIKS PKPNG*