GBrowse Details

Vigan.04G070700.01

Basic Information:
Name: Vigan.04G070700.01
Multiple alignment
Variant Information
Position: Chr04:6757081..6760375 (+ strand)
Length: 3295
Functional Information:
Description: Similar to Uncharacterized protein. [G7KQL7, Medicago truncatula]
GO: Biological Process: cell redox homeostasis (GO:0045454)
Molecular Function: electron carrier activity (GO:0009055)
Molecular Function: protein disulfide oxidoreductase activity (GO:0015035)
InterPro: Glutaredoxin (IPR002109)
Monothiol glutaredoxin-related (IPR004480)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:33.77,20.40,28.13,84.29,30.27,56.46,44.20,28.84
Arabidopsis thaliana homolog: AT3G54900.1
Automatic updates:
Name: NM_001248888 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100305724 (LOC100305724), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001249335 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500060 (LOC100500060), mRNA; nuclear gene for chloroplast product.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:6757081..6757250 (+ strand)
Length: 170
Type: five_prime_UTR
Position: Chr04:6757251..6757455 (+ strand)
Length: 205
Type: CDS
Position: Chr04:6758235..6758504 (+ strand)
Length: 270
Type: CDS
Position: Chr04:6759572..6759627 (+ strand)
Length: 56
Type: CDS
Position: Chr04:6759628..6760375 (+ strand)
Length: 748
Type: three_prime_UTR


>Vigan.04G070700.01
TGAAACAAAA GGTTCTCTAT CAAATTGATA AAACCATAAT TTATGAGTAT ATGGTGTCTA ATTATTATAC TATATAATTG
AAAACATAGT ATTGTTGTGG TGGAAGAGAG TAGATATTTG GAGCAGAGTG TGGTGGGTGA GTAGTTTTTT GTTTGGAAGG
AGAAGCAAAC ATGTCTTACT GTGCTAAGCC TTTGACCTTG CAACTGCAGT TGCACTCAAG AACATCATCG TCATCGTTCC
AATCCCATGT TGGAGGAGTA ACAGTAACAA CCTCAACACT GTCTCTTCGG CCCTCTCCTT CTCTTGTTTT CACCCACAAC
CTCCATTTCC AACCCAAAAT CAAACGCGCT TCCACAACCA TTCGATGCGC CTCTGCGTTG ACTCCTCAAT TGAAGTCTAC
CTTGGATACA GTTATTGCTT CAAATAAAAT AGTTCTGTTT ATGAAGGGAA CTAAGGACTT TCCACAGTGT GGGTTCTCAA
ACACAGTGGT GCAAATATTG AAGTCTCTAA ATGTGCCTTT TGAAACCTTA AACGTGCTTG AAAATGACAT GTTACGCCAA
GGACTGAAGG AGTACTCCAG TTGGCCTACC TTTCCTCAAC TCTACATAGA TGGAGAGTTT TTTGGTGGCT GTGATATCAC
TGTTGAGGCA TATAAGAACG GGGAATTGCA GGAGTTGTTG GAAAAGGCAA TGTTATCCTG AAACCATGGA AGGAATGAGA
GGACTTTCCA AGTTTGTAAT CTTCCCTAAG TTCTACTGTG GCTCAGTGAT AATGGACCAA GTAAATTGTC CAATGTTTTC
TCGTGTCCAC AAATGCCTAT TATGATTACT GCAAAAGAAA TCCTGGTATT TGAGTATAAA GCAGACAACT CATTTGATGA
TATCTCATTA AATAGACTAT TTATTGTTTT ACTAGTTGCT ACTGCAAATC TATTGAATAA ACTATTCGAA ACTGACATGT
TTCTGCTACC TGTCGTATCT TGTAAACATC TTTTTTTTTG TTTTTGTTTG AAGAATTAGT TTAATAATGA TGGAAGTACC
TTGCTCTAGA TTGTTCCATT ACATATTCAA CATGTAAAAT CCAATTAAAT ATAACTCAAC TTTTGAAGCT TAGCCTTGAC
GTGCCATTGC TCATGAAGGG GCTGGTGGGA TATATCTCAT ACATACATGT CATTAATGGA AAAGAACATA CTTTGTAAGT
ATGGTTATGG AGTTAGCACA AGTAATTACA CTTTTGAAAG GTTATGGCAA TGATGGCCAA TTCCATAATA CCTATTTAAA
TAATGGTGTT TAATATCCAT GCAGTTGGTT TTGGTGTGTG TACATACAAA TGGTTGTTTT TCTGGTTGGT TTGTGAAATT
GGATTACATC CATTCCATCC ACCCAAAGGA AAAAGAGAAG TGATAGTTAT GCATTTGCTA ACACTTTCTT TTCAACATGT
TTACTGATT

>Vigan.04G070700.01
ATGTCTTACT GTGCTAAGCC TTTGACCTTG CAACTGCAGT TGCACTCAAG AACATCATCG TCATCGTTCC AATCCCATGT
TGGAGGAGTA ACAGTAACAA CCTCAACACT GTCTCTTCGG CCCTCTCCTT CTCTTGTTTT CACCCACAAC CTCCATTTCC
AACCCAAAAT CAAACGCGCT TCCACAACCA TTCGATGCGC CTCTGCGTTG ACTCCTCAAT TGAAGTCTAC CTTGGATACA
GTTATTGCTT CAAATAAAAT AGTTCTGTTT ATGAAGGGAA CTAAGGACTT TCCACAGTGT GGGTTCTCAA ACACAGTGGT
GCAAATATTG AAGTCTCTAA ATGTGCCTTT TGAAACCTTA AACGTGCTTG AAAATGACAT GTTACGCCAA GGACTGAAGG
AGTACTCCAG TTGGCCTACC TTTCCTCAAC TCTACATAGA TGGAGAGTTT TTTGGTGGCT GTGATATCAC TGTTGAGGCA
TATAAGAACG GGGAATTGCA GGAGTTGTTG GAAAAGGCAA TGTTATCCTG A

>Vigan.04G070700.01
MSYCAKPLTL QLQLHSRTSS SSFQSHVGGV TVTTSTLSLR PSPSLVFTHN LHFQPKIKRA STTIRCASAL TPQLKSTLDT
VIASNKIVLF MKGTKDFPQC GFSNTVVQIL KSLNVPFETL NVLENDMLRQ GLKEYSSWPT FPQLYIDGEF FGGCDITVEA
YKNGELQELL EKAMLS*