GBrowse Details

Vigan.04G086100.01

Basic Information:
Name: Vigan.04G086100.01
Multiple alignment
Variant Information
Position: Chr04:8875529..8878377 (+ strand)
Length: 2849
Functional Information:
Description: Similar to uncharacterized LOC101223085 isoform 2. [XP_004155823.1, Cucumis sativus]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:7.86,3.69,3.24,5.19,7.76,2.08,2.78,5.00
Arabidopsis thaliana homolog: AT4G00525.1
Automatic updates:
Name: NM_001248773 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100526900 (LOC100526900), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:8875529..8875699 (+ strand)
Length: 171
Type: five_prime_UTR
Position: Chr04:8875700..8875877 (+ strand)
Length: 178
Type: CDS
Position: Chr04:8877687..8877910 (+ strand)
Length: 224
Type: CDS
Position: Chr04:8877911..8878377 (+ strand)
Length: 467
Type: three_prime_UTR


>Vigan.04G086100.01
GTTTCCCCTG TGCACCTTAA CACTACATAT TCATGGTAGA TTCAAAATTT GAAAGTACAC CAGAAAAAGT CGTAAACCCA
CTAAACAGCC TTCTTATTCA CACTACTTCT CTGCTTTATC TTCTCCAACG TGAACACACC AACGCAAAAA GTATTCCAAT
TTCTACAAAC AATGGCTTCC GAAGCGGTGG AAACTCACGA AGCTGAAGAA AAAGCGGAAG TGGAGAAGTT GGAATCTGAT
TTGAAGCAAA TGGCGCAGAA GATTCTCGAA TACCGGACAA CGCTTCCAGA TCAGCTCAGC TCCACACTCC GTTCGATTCT
CGATGCCCAC AGACCCTATC TCCCTCTGGG TGCATCAGAA CAAAACATGT CTAGAGAAGA AACTTCATCT GCTCCGGAAG
ACCCAGAGAC TGCCAAGAAA CTGAAATTGC TGAATGAAAA GATCTCGAGC AATTGCTCTG CTATGCCAAT TGTTTTGAAA
AGGATGAAAG ATTGCATTAC CAGAATTGAA AAGTTTGATT CATACAAAGA TTCAATGATA CATCCGGCCT TCAAAAGGAA
GAAGACTGGA TAGCCTTGAT GTAACTTACA GTAGTTATTT ATCTAAACAC ATAAGCAAAC AAGTGATCCA GCATTGACCA
ACTTGGATTT GTTCGATGAA GCCACCTCTC TACCATTTTC CTTATTCTGC AAGTGGGAAG AATGATTCGA TGCTGATGTA
TAATGTATTA CATTGTTTGG TCTTTTGTGA TATTTTGAAA AGCAACCCTT GCCAGTAGGA CAGGGAGTGA GACAGTGAAG
GAAAAGACAG GATGTTGTAT AGTTCTTGTC GCTGTGTATC GGCTTCATCA TTAATTGTAT GTAAGCTTTT ACATTTGCTT
AACTTGTGAT GGCTTTAGGC TTTAGCATAT TGTATGTAAA AAATTTCTTG CAATGAACTT ATTCTTTGTC CTATTTTAAG
ATTGATCATT TGAACTGTTA GGCACCTCAA ATATACCCAA CAACTAGGGT GATATTTGCT ATGTACAAAC TTGTTAGGCA


>Vigan.04G086100.01
ATGGCTTCCG AAGCGGTGGA AACTCACGAA GCTGAAGAAA AAGCGGAAGT GGAGAAGTTG GAATCTGATT TGAAGCAAAT
GGCGCAGAAG ATTCTCGAAT ACCGGACAAC GCTTCCAGAT CAGCTCAGCT CCACACTCCG TTCGATTCTC GATGCCCACA
GACCCTATCT CCCTCTGGGT GCATCAGAAC AAAACATGTC TAGAGAAGAA ACTTCATCTG CTCCGGAAGA CCCAGAGACT
GCCAAGAAAC TGAAATTGCT GAATGAAAAG ATCTCGAGCA ATTGCTCTGC TATGCCAATT GTTTTGAAAA GGATGAAAGA
TTGCATTACC AGAATTGAAA AGTTTGATTC ATACAAAGAT TCAATGATAC ATCCGGCCTT CAAAAGGAAG AAGACTGGAT
AG

>Vigan.04G086100.01
MASEAVETHE AEEKAEVEKL ESDLKQMAQK ILEYRTTLPD QLSSTLRSIL DAHRPYLPLG ASEQNMSREE TSSAPEDPET
AKKLKLLNEK ISSNCSAMPI VLKRMKDCIT RIEKFDSYKD SMIHPAFKRK KTG*