GBrowse Details

Vigan.04G107800.01

Basic Information:
Name: Vigan.04G107800.01
Multiple alignment
Variant Information
Position: Chr04:11792197..11794257 (- strand)
Length: 2061
Functional Information:
Description: Similar to Vestitone reductase. [B5LZ63, Glycine max]
GO: Biological Process: cellular metabolic process (GO:0044237)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: coenzyme binding (GO:0050662)
InterPro: NAD-dependent epimerase/dehydratase (IPR001509)
NAD(P)-binding domain (IPR016040)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.05,0.94,34.38,7.32,32.07,15.96,66.03,1.95
Arabidopsis thaliana homolog: AT2G45400.1
Automatic updates:
Name: LC497420 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max cv. Nourin No.2 GmI4R1 mRNA for isoflavanone 4-reductase, complete cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:11792197..11792465 (- strand)
Length: 269
Type: three_prime_UTR
Position: Chr04:11792466..11792607 (- strand)
Length: 142
Type: CDS
Position: Chr04:11792773..11792965 (- strand)
Length: 193
Type: CDS
Position: Chr04:11793102..11793629 (- strand)
Length: 528
Type: CDS
Position: Chr04:11793792..11793912 (- strand)
Length: 121
Type: CDS
Position: Chr04:11793913..11794257 (- strand)
Length: 345
Type: five_prime_UTR

>Vigan.04G107800.01 class=Sequence position=Chr04:11792197..11794257 (- strand)
GTTTGGTAGG TGAAAGTACT GTTCAAACTT TGGAAAACAA AGACTTATCT CCTAGATTCT TTTTCTTTAG TTACTCTCTT
TCTCAACTCT AAATGTGTCT GTTGTGTCTC TTTGAATGAA GAAAACTTAG TTAACTTGAG TGAAGTTCGT TCAACTGTGC
TATGTTTGAC CCAAAGAATA GTCAATAACA ACTGTGAAAC ATCACCTTAA AGTTGATAGC AATAGCTACC AACCTAAATG
CTATGCTTCT ATATATACAC ATTCAAAGAA AGCAGAAGAA ATTTATAGCG TGGAGGAGTG CACAACACAA AGAAAAGTAA
ACACTGCCAC AGGAAGAGTA TTACAATGGC AGAGACAAAA GGCACAGTTT GTGTTACTGG AGGAACAGGC TTCATTGGTT
CATGGATCAT CAAGTCACTC CTTGAACATG GATATTCCGT TAATACAACT ATTAGATCTG ACCCAGGTAA GTAACTAAAG
CTTTATTGGT ATCAGAACTG AAGTTAGACT TCTATAATGT ATTGATCATT CACGTAAACT TTTATCATGT AAGTTAAAGC
AAACACCCAC TACAGTAGTT AACGTTGGAC AAGGTTATAA CTATGTTGTT CTGTTTTGGC ATGAAAAGGA CGCAAGAGGG
ATGTTAGCTT TCTCACAAAT CTACCTGGTG CATCAGAAAA GCTACGTTTT TTCAACGCTG ATCTGAGTGA CCCAGAGAGT
TTTGGTCCAG CAGTAGAAGG GTGTGTTGGG ATTTTTCACA CTGCCACACC AATTGATTTT GCAGTGAACG AGCCAGAAGA
AGTTGTGACC AAAAGGGCCA TCGAGGGAGC ACTGGGCATA CTGAAAGCAG CTGTGAAATC AAAGTCAGTG AAGAGGGTTG
TCTACACTTC TAGTGCTTCC ACTGTTTCCT TCACTGGCCC AGAGCCACAA GATGTGGTTG ATGAAAGTGC TTGGAGTGAT
GTTGATTTGC TGAGGAAGTT GAAGCCTTTT AGTTGGTCAT ATACAATTTC AAAGGTGTTG ACAGAGAAGG CAGTGTTTGA
GTTTGGAGAA CAGAATGGAT TGGAAGTTGT GAGTCTTGTG CCTCCCTTTG TTGTTGGACG TTTCATCTGT CCCAAGCTTC
CTGACTCTAT TGAAAGAGCA CTGCTTTTGT TGTTTGGTAC ACTGCTTACA CCTTATTCCA CTCTCTTATT CCTTTTTACT
TTTCATGTTT CAAACTGAGT TCTATCGAAA TCATGACACC TTTTCACAAG ATTAAAGGTT GTATAATTGA AGTTGGCGTT
AAATTGATGC AGGCAAAAAG GAAGAAATTG GAGTGATCCG TTACCATATG GTTCATGTGG ATGATTTGGC TAGAGCACAT
ATCTTTCTGC TGGAGCATCC TAATCCCAAA GGGAGATATA ACTGTTCACC CTTCATTGTA CCCATTGAAG AGATTGCTGA
AATTATTTCA ACCAAATACC CAGAATTTCA AATACCATCT GTAGAGTAAG TTCTGTTCTC CTTGCACATA GTCAACTTTT
CAGATTGCAG TTTCAGTCAC AGTTTCTATC ATAACACAAT TCACAAATCT AAAAGTTGGT GTGACAATTA TACAGTATCT
GGTTTTGTAT TAACTTTAGG AGTAATGATT GATTTGTGTT GTTCCTTCAG AGAGGCGAAG GAAATAAAAG GTGCCAAGTT
GCCACATTTA GACTCGCAGA AACTGGTGGA TGCTGGCTTT GAGTTCAAGT ATAGTGTGGA GGACATTTTT ACTGATGCGA
TTGAATGCTG CAAGCAAAAT GGTTATCTTT AAATCATTTC ACTCATCAGA TTCACAAAAT AAAATCAATG ATTGTTGGAG
GCATCTACAC TGTTTGATGC ATCTTGTTAT TTTCCTAATT AGTCAATAAA GGATGTAATT TTTGTCCTTT GTCTCAGTAC
AGTGTAAATC TTCAATATTC ATGTTTTCAT GTCAGTTTTA AATCTTGTTG CATTATCTGA TGCAGTGTGA AAATTCATCT
GTCGTCAAAA ATAACAGACT CACAGTACAA CAATCATAAT TTAATTTTTT ATTTGGTGGA A

>Vigan.04G107800.01
GTTTGGTAGG TGAAAGTACT GTTCAAACTT TGGAAAACAA AGACTTATCT CCTAGATTCT TTTTCTTTAG TTACTCTCTT
TCTCAACTCT AAATGTGTCT GTTGTGTCTC TTTGAATGAA GAAAACTTAG TTAACTTGAG TGAAGTTCGT TCAACTGTGC
TATGTTTGAC CCAAAGAATA GTCAATAACA ACTGTGAAAC ATCACCTTAA AGTTGATAGC AATAGCTACC AACCTAAATG
CTATGCTTCT ATATATACAC ATTCAAAGAA AGCAGAAGAA ATTTATAGCG TGGAGGAGTG CACAACACAA AGAAAAGTAA
ACACTGCCAC AGGAAGAGTA TTACAATGGC AGAGACAAAA GGCACAGTTT GTGTTACTGG AGGAACAGGC TTCATTGGTT
CATGGATCAT CAAGTCACTC CTTGAACATG GATATTCCGT TAATACAACT ATTAGATCTG ACCCAGGACG CAAGAGGGAT
GTTAGCTTTC TCACAAATCT ACCTGGTGCA TCAGAAAAGC TACGTTTTTT CAACGCTGAT CTGAGTGACC CAGAGAGTTT
TGGTCCAGCA GTAGAAGGGT GTGTTGGGAT TTTTCACACT GCCACACCAA TTGATTTTGC AGTGAACGAG CCAGAAGAAG
TTGTGACCAA AAGGGCCATC GAGGGAGCAC TGGGCATACT GAAAGCAGCT GTGAAATCAA AGTCAGTGAA GAGGGTTGTC
TACACTTCTA GTGCTTCCAC TGTTTCCTTC ACTGGCCCAG AGCCACAAGA TGTGGTTGAT GAAAGTGCTT GGAGTGATGT
TGATTTGCTG AGGAAGTTGA AGCCTTTTAG TTGGTCATAT ACAATTTCAA AGGTGTTGAC AGAGAAGGCA GTGTTTGAGT
TTGGAGAACA GAATGGATTG GAAGTTGTGA GTCTTGTGCC TCCCTTTGTT GTTGGACGTT TCATCTGTCC CAAGCTTCCT
GACTCTATTG AAAGAGCACT GCTTTTGTTG TTTGGCAAAA AGGAAGAAAT TGGAGTGATC CGTTACCATA TGGTTCATGT
GGATGATTTG GCTAGAGCAC ATATCTTTCT GCTGGAGCAT CCTAATCCCA AAGGGAGATA TAACTGTTCA CCCTTCATTG
TACCCATTGA AGAGATTGCT GAAATTATTT CAACCAAATA CCCAGAATTT CAAATACCAT CTGTAGAAGA GGCGAAGGAA
ATAAAAGGTG CCAAGTTGCC ACATTTAGAC TCGCAGAAAC TGGTGGATGC TGGCTTTGAG TTCAAGTATA GTGTGGAGGA
CATTTTTACT GATGCGATTG AATGCTGCAA GCAAAATGGT TATCTTTAAA TCATTTCACT CATCAGATTC ACAAAATAAA
ATCAATGATT GTTGGAGGCA TCTACACTGT TTGATGCATC TTGTTATTTT CCTAATTAGT CAATAAAGGA TGTAATTTTT
GTCCTTTGTC TCAGTACAGT GTAAATCTTC AATATTCATG TTTTCATGTC AGTTTTAAAT CTTGTTGCAT TATCTGATGC
AGTGTGAAAA TTCATCTGTC GTCAAAAATA ACAGACTCAC AGTACAACAA TCATAATTTA ATTTTTTATT TGGTGGAA

>Vigan.04G107800.01
ATGGCAGAGA CAAAAGGCAC AGTTTGTGTT ACTGGAGGAA CAGGCTTCAT TGGTTCATGG ATCATCAAGT CACTCCTTGA
ACATGGATAT TCCGTTAATA CAACTATTAG ATCTGACCCA GGACGCAAGA GGGATGTTAG CTTTCTCACA AATCTACCTG
GTGCATCAGA AAAGCTACGT TTTTTCAACG CTGATCTGAG TGACCCAGAG AGTTTTGGTC CAGCAGTAGA AGGGTGTGTT
GGGATTTTTC ACACTGCCAC ACCAATTGAT TTTGCAGTGA ACGAGCCAGA AGAAGTTGTG ACCAAAAGGG CCATCGAGGG
AGCACTGGGC ATACTGAAAG CAGCTGTGAA ATCAAAGTCA GTGAAGAGGG TTGTCTACAC TTCTAGTGCT TCCACTGTTT
CCTTCACTGG CCCAGAGCCA CAAGATGTGG TTGATGAAAG TGCTTGGAGT GATGTTGATT TGCTGAGGAA GTTGAAGCCT
TTTAGTTGGT CATATACAAT TTCAAAGGTG TTGACAGAGA AGGCAGTGTT TGAGTTTGGA GAACAGAATG GATTGGAAGT
TGTGAGTCTT GTGCCTCCCT TTGTTGTTGG ACGTTTCATC TGTCCCAAGC TTCCTGACTC TATTGAAAGA GCACTGCTTT
TGTTGTTTGG CAAAAAGGAA GAAATTGGAG TGATCCGTTA CCATATGGTT CATGTGGATG ATTTGGCTAG AGCACATATC
TTTCTGCTGG AGCATCCTAA TCCCAAAGGG AGATATAACT GTTCACCCTT CATTGTACCC ATTGAAGAGA TTGCTGAAAT
TATTTCAACC AAATACCCAG AATTTCAAAT ACCATCTGTA GAAGAGGCGA AGGAAATAAA AGGTGCCAAG TTGCCACATT
TAGACTCGCA GAAACTGGTG GATGCTGGCT TTGAGTTCAA GTATAGTGTG GAGGACATTT TTACTGATGC GATTGAATGC
TGCAAGCAAA ATGGTTATCT TTAA

>Vigan.04G107800.01
MAETKGTVCV TGGTGFIGSW IIKSLLEHGY SVNTTIRSDP GRKRDVSFLT NLPGASEKLR FFNADLSDPE SFGPAVEGCV
GIFHTATPID FAVNEPEEVV TKRAIEGALG ILKAAVKSKS VKRVVYTSSA STVSFTGPEP QDVVDESAWS DVDLLRKLKP
FSWSYTISKV LTEKAVFEFG EQNGLEVVSL VPPFVVGRFI CPKLPDSIER ALLLLFGKKE EIGVIRYHMV HVDDLARAHI
FLLEHPNPKG RYNCSPFIVP IEEIAEIIST KYPEFQIPSV EEAKEIKGAK LPHLDSQKLV DAGFEFKYSV EDIFTDAIEC
CKQNGYL*