GBrowse Details

Vigan.04G154700.01

Basic Information:
Name: Vigan.04G154700.01
Multiple alignment
Variant Information
Position: Chr04:21197571..21199823 (- strand)
Length: 2253
Functional Information:
Description: Similar to dCTP pyrophosphatase. [G7KY22, Medicago truncatula]
InterPro: NTP pyrophosphohydrolase MazG, putative catalytic core (IPR004518)
EAR (IPR009039)
NTP Pyrophosphohydrolase MazG-related, RS21-C6 (IPR011394)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:22.81,1.92,6.25,48.44,13.51,3.53,4.10,3.57
Automatic updates:
Name: NM_001251668 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500214 (LOC100500214), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:21197571..21197895 (- strand)
Length: 325
Type: three_prime_UTR
Position: Chr04:21197896..21198195 (- strand)
Length: 300
Type: CDS
Position: Chr04:21199533..21199655 (- strand)
Length: 123
Type: CDS
Position: Chr04:21199656..21199823 (- strand)
Length: 168
Type: five_prime_UTR


>Vigan.04G154700.01
ATTATAAATA AATAAATACG AAAAGTATTA ATATTAGTTA TTATTTTCTA TATATTATCG GGAAGCAATG TCTCTTACTC
TCATTTTACA ATCTTCCCTT CTGTTCCTTG TGCTTTGTCT TTCTCCACTC ATCTTTTCCT CTTCTCTCTT CTCTTTCTTC
TCTCCATCAT GACCGGGATT GCTGATGAAG CCCCCGTGAC CCTCGACACG CTCAAGCAGT TAATGGCTCA GTTTGCCAAG
GAGAGAGACT GGGATCGTTT TCACAGCCCA AGAAACCTTC TATTGGCTCT GGTGGGTGAA GTAGGAGAAT TGTCTGAGAT
ATTTCAGTGG AAAGGAGAGG TTCCAAAGGG TCTTCCAGGT TGGAAAGAGG AAGAAAAGGT TCATCTTGGT GAAGAGCTTT
CTGATGTGTT GCTTTACCTC GTGAGGCTCT CTGACATTTG TGGTGTTGAT CTTGGTAAAG CTGCTTTGAG AAAGGTTCAA
CTCAATGCCA TAAAATACCC TGCAAAAGTT TGCAAAGAGG TGGTTTCAGT TTCAAGCACC CCAGAGGAAA ACCCTTCCAC
CAACAATGGC GCTGCCCCTT ATGCTGACTG AAATATGTGT TGTTGTTATT CTTGTAATAA CAGTAATCAT GTGGTGAATT
TAGTATCTTT AGCTGAATTA GGGATGAAGT GGGAAATGGG GCATGGTGGT TTTGTACAAT GGTTTATGCA GTGTTTTTGC
TGCCATTGCA TGGAAACCAA ACTAATGTTT AGTGTCTGGT AGTTGGTACG TTTATTCTAT CAGATTTGTT TTCACTGTTT
TGGCAGAATC AAATCCCGTG ACAGATATCA GATATGAAGA GATCTAATTC TTCCATTTTT GGTTACCTTA CGTTTTACGA
TTTTGGGGAC ATTTTGGATG CACAAATAGA TTCCGG

>Vigan.04G154700.01
ATGACCGGGA TTGCTGATGA AGCCCCCGTG ACCCTCGACA CGCTCAAGCA GTTAATGGCT CAGTTTGCCA AGGAGAGAGA
CTGGGATCGT TTTCACAGCC CAAGAAACCT TCTATTGGCT CTGGTGGGTG AAGTAGGAGA ATTGTCTGAG ATATTTCAGT
GGAAAGGAGA GGTTCCAAAG GGTCTTCCAG GTTGGAAAGA GGAAGAAAAG GTTCATCTTG GTGAAGAGCT TTCTGATGTG
TTGCTTTACC TCGTGAGGCT CTCTGACATT TGTGGTGTTG ATCTTGGTAA AGCTGCTTTG AGAAAGGTTC AACTCAATGC
CATAAAATAC CCTGCAAAAG TTTGCAAAGA GGTGGTTTCA GTTTCAAGCA CCCCAGAGGA AAACCCTTCC ACCAACAATG
GCGCTGCCCC TTATGCTGAC TGA

>Vigan.04G154700.01
MTGIADEAPV TLDTLKQLMA QFAKERDWDR FHSPRNLLLA LVGEVGELSE IFQWKGEVPK GLPGWKEEEK VHLGEELSDV
LLYLVRLSDI CGVDLGKAAL RKVQLNAIKY PAKVCKEVVS VSSTPEENPS TNNGAAPYAD *