GBrowse Details

Vigan.04G163200.01

Basic Information:
Name: Vigan.04G163200.01
Multiple alignment
Variant Information
Position: Chr04:22934617..22937896 (+ strand)
Length: 3280
Functional Information:
Description: Similar to Uncharacterized protein. [I1N201, Glycine max]
GO: Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757)
InterPro: Glycosyl transferase, family 8 (IPR002495)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:219.38,135.64,38.43,41.65,41.75,62.23,40.75,92.48
Arabidopsis thaliana homolog: AT3G02350.1, AT3G25140.1
Structure :
Position: Chr04:22934617..22934801 (+ strand)
Length: 185
Type: five_prime_UTR
Position: Chr04:22934802..22934945 (+ strand)
Length: 144
Type: CDS
Position: Chr04:22935643..22936893 (+ strand)
Length: 1251
Type: CDS
Position: Chr04:22937199..22937474 (+ strand)
Length: 276
Type: CDS
Position: Chr04:22937475..22937896 (+ strand)
Length: 422
Type: three_prime_UTR


>Vigan.04G163200.01
GTTATATTTC GTATAGTAAC ATTTAAAGTT AAATTCAACT ATAAAATGTC AAATCCGAGT CTTTGTTTCT GTCTCTCTTT
GAGAAGAAGG GGAGCGAAAG AGAGAATCAG AGTGCATGTT TTTGGGAGTC CACTGGAGTT AAGTGCTGCC TCCTCTCTCT
GATTTTGGAG TTCTCTCATA CCAAAATGGT GAATCCTCGG ATTCCACTTT CAAGGATCCC AACCTTCACA CTTTTCACTT
CTGCTATAAC ATTAGCTCTC TGCACTTTCT TCCTCCTCTC TTTTCTCTTC ACTACCCATT CTTATTCTTC TCATCAACAC
CACTTAACGG GTTCTGAGGG TGGTATTTCA CATGGATTTG AGTCAATAAG AAGATCCATT CTAGCTCTGA AAACAGATCC
TCTGAAGCCT CGACTGGACC AGATTCGTAA GCAAGCTGAT GATCATCGTT CTTTGGCTCT TGTGTATGCT TCCTATGCAC
GCAAACTGAA GCTCGAGAGC TCAAAGCTTG TCAGGATTTT CGCAGAGCTA TCAGTAAACT TCTCAGATCT AATGAAAAAA
CCTCAATACA GGACTCTTTT CAGCAGTGAT GGATCCCCTG CTGATGAATC AGTGGTTCGA CAATTGGAGA AGGAAGTGAA
GGAGCGCATT AAGACCACAC GCCAGGTGAT TGGCGATGCC AAAGAATCCT TTGATAACCA GCTCAAGATT CAGAAGTTGA
AGGATACGAT TTTCTCAGTG AATGAGCAGT TAACTAAGGC AAAGAAGCAG GGTGCTTTCT CGAGCCTCAT TGCGGCCAAG
TCGATTCCAA AGAGTTTGCA TTGTCTCTCC ATGAGGTTGA TGGAAGAGAG GATTGCCCAT CCTGAGAAGT ACACAACTGA
GGGGAAGCCT ACCCCTCCAG AAGTTGAAGA TCCTAACCTT TACCACTATG CCTTGTTCTC TGACAATGTT GTTGCAGCAT
CTGTTGTGGT CAATTCAGCA ACAAAGAATG CAAAGGAGCC ATGGAAGCAT GTGTTTCATG TTGTGACTGA TAAGATGAAC
CTTGGAGCAA TGCAAGTGAT GTTTAAGTTG AAGGATTATA ATGGTGCACA CATTGAGGTC AAGGCAGTGG AGGATTACAA
GTTCCTGAAC TCTTCTTATG TTCCGGTCCT TAAACAATTA GAGTCTGCTA ACCTCCAGAG ATTTTACTTC GAGAACAAGC
TTGAGAATGC TACAAAGGAC ACTAATAATA TGAAGTTTAG GAATCCCAAA TATTTGTCCA TATTGAACCA TTTAAGATTT
TACTTGCCAG AAATGTATCC AAAGCTGCAT AAAATTTTGT TTTTGGATGA TGACATTGTG GTTCAGAAGG ATCTTACCGG
GTTGTGGAAG ATTGATATGG ATGGCAAGGT TAATGGAGCT GTAGAAACAT GTTTTGGATC ATTCCATAGA TATGCACAGT
ACATGAACTT CTCGCACCCC TTGATTAAAG CAAAATTTAG TCCAAAGGCT TGTGCATGGG CTTATGGAAT GAATTTCTTT
GATTTGGATG CATGGAGAAG GGAAAAATGC ACGGAAGAAT ATCATTACTG GCAGAATCTG AATGAAAACC GAACACTATG
GAAATTAGGG ACATTGCCAC CAGGTCTGAT CACATATTAC TCAACAACTA AACCACTGGA TAAGTCATGG CATGTTCTGG
GACTTGGCTA TAATCCAAGC ATCAGCATGG ATGAGATTAA CAATGCAGCA GTGGTGCATT TCAATGGCAA CATGAAACCA
TGGCTTGACA TTGCAATGGC TCAATTCAAG CCTCTTTGGA CAAAGTATGT TGACTATGAA TTAGATTTCG TTCAGGCATG
CAATTTTGGT ATCTAAATGG GCGAGTTTCT TTACACTTGG TGATGCTGTG ATAGGTGCCT CTGCAGTTAA TCTGCTGTTA
TATAATGCTT ATACCTTTAA CGAAGTTCCG AGCTGGTGCA AGATAAAATC TGGCTTCTTC TTTTAATTGT AAAATACTTA
GTGTAGTAAT TCTCTCACGT CCTCTTATTT ATTTTAACAT TTATGAAATA ATCTTATTTA AAAGATGTGG TTGATCCTGA
ACAATAGTAT TACTGAATTA AATGTTGTGC TTTTCACTTT TTGTCAGTTT TTATTTGTGA TAAACATCTG AATTGAGGGT
ATCAATATCA TACTTAGGGA TTTCAATGCC TAAAATTACT TTTTAGATTC TTCCAGACTG ATGTTTACCT GTTAAAGTGT
AAGTTCGTTG TTTGAATAGA GGTTTAATTG GAAGCAAA

>Vigan.04G163200.01
ATGGTGAATC CTCGGATTCC ACTTTCAAGG ATCCCAACCT TCACACTTTT CACTTCTGCT ATAACATTAG CTCTCTGCAC
TTTCTTCCTC CTCTCTTTTC TCTTCACTAC CCATTCTTAT TCTTCTCATC AACACCACTT AACGGGTTCT GAGGGTGGTA
TTTCACATGG ATTTGAGTCA ATAAGAAGAT CCATTCTAGC TCTGAAAACA GATCCTCTGA AGCCTCGACT GGACCAGATT
CGTAAGCAAG CTGATGATCA TCGTTCTTTG GCTCTTGTGT ATGCTTCCTA TGCACGCAAA CTGAAGCTCG AGAGCTCAAA
GCTTGTCAGG ATTTTCGCAG AGCTATCAGT AAACTTCTCA GATCTAATGA AAAAACCTCA ATACAGGACT CTTTTCAGCA
GTGATGGATC CCCTGCTGAT GAATCAGTGG TTCGACAATT GGAGAAGGAA GTGAAGGAGC GCATTAAGAC CACACGCCAG
GTGATTGGCG ATGCCAAAGA ATCCTTTGAT AACCAGCTCA AGATTCAGAA GTTGAAGGAT ACGATTTTCT CAGTGAATGA
GCAGTTAACT AAGGCAAAGA AGCAGGGTGC TTTCTCGAGC CTCATTGCGG CCAAGTCGAT TCCAAAGAGT TTGCATTGTC
TCTCCATGAG GTTGATGGAA GAGAGGATTG CCCATCCTGA GAAGTACACA ACTGAGGGGA AGCCTACCCC TCCAGAAGTT
GAAGATCCTA ACCTTTACCA CTATGCCTTG TTCTCTGACA ATGTTGTTGC AGCATCTGTT GTGGTCAATT CAGCAACAAA
GAATGCAAAG GAGCCATGGA AGCATGTGTT TCATGTTGTG ACTGATAAGA TGAACCTTGG AGCAATGCAA GTGATGTTTA
AGTTGAAGGA TTATAATGGT GCACACATTG AGGTCAAGGC AGTGGAGGAT TACAAGTTCC TGAACTCTTC TTATGTTCCG
GTCCTTAAAC AATTAGAGTC TGCTAACCTC CAGAGATTTT ACTTCGAGAA CAAGCTTGAG AATGCTACAA AGGACACTAA
TAATATGAAG TTTAGGAATC CCAAATATTT GTCCATATTG AACCATTTAA GATTTTACTT GCCAGAAATG TATCCAAAGC
TGCATAAAAT TTTGTTTTTG GATGATGACA TTGTGGTTCA GAAGGATCTT ACCGGGTTGT GGAAGATTGA TATGGATGGC
AAGGTTAATG GAGCTGTAGA AACATGTTTT GGATCATTCC ATAGATATGC ACAGTACATG AACTTCTCGC ACCCCTTGAT
TAAAGCAAAA TTTAGTCCAA AGGCTTGTGC ATGGGCTTAT GGAATGAATT TCTTTGATTT GGATGCATGG AGAAGGGAAA
AATGCACGGA AGAATATCAT TACTGGCAGA ATCTGAATGA AAACCGAACA CTATGGAAAT TAGGGACATT GCCACCAGGT
CTGATCACAT ATTACTCAAC AACTAAACCA CTGGATAAGT CATGGCATGT TCTGGGACTT GGCTATAATC CAAGCATCAG
CATGGATGAG ATTAACAATG CAGCAGTGGT GCATTTCAAT GGCAACATGA AACCATGGCT TGACATTGCA ATGGCTCAAT
TCAAGCCTCT TTGGACAAAG TATGTTGACT ATGAATTAGA TTTCGTTCAG GCATGCAATT TTGGTATCTA A

>Vigan.04G163200.01
MVNPRIPLSR IPTFTLFTSA ITLALCTFFL LSFLFTTHSY SSHQHHLTGS EGGISHGFES IRRSILALKT DPLKPRLDQI
RKQADDHRSL ALVYASYARK LKLESSKLVR IFAELSVNFS DLMKKPQYRT LFSSDGSPAD ESVVRQLEKE VKERIKTTRQ
VIGDAKESFD NQLKIQKLKD TIFSVNEQLT KAKKQGAFSS LIAAKSIPKS LHCLSMRLME ERIAHPEKYT TEGKPTPPEV
EDPNLYHYAL FSDNVVAASV VVNSATKNAK EPWKHVFHVV TDKMNLGAMQ VMFKLKDYNG AHIEVKAVED YKFLNSSYVP
VLKQLESANL QRFYFENKLE NATKDTNNMK FRNPKYLSIL NHLRFYLPEM YPKLHKILFL DDDIVVQKDL TGLWKIDMDG
KVNGAVETCF GSFHRYAQYM NFSHPLIKAK FSPKACAWAY GMNFFDLDAW RREKCTEEYH YWQNLNENRT LWKLGTLPPG
LITYYSTTKP LDKSWHVLGL GYNPSISMDE INNAAVVHFN GNMKPWLDIA MAQFKPLWTK YVDYELDFVQ ACNFGI*