GBrowse Details

Vigan.04G167100.01

Basic Information:
Name: Vigan.04G167100.01
Multiple alignment
Variant Information
Position: Chr04:23544405..23549196 (- strand)
Length: 4792
Functional Information:
Description: Similar to Uncharacterized protein. [Q93XG4, Glycine max]
GO: Molecular Function: acid phosphatase activity (GO:0003993)
Molecular Function: hydrolase activity (GO:0016787)
Molecular Function: metal ion binding (GO:0046872)
InterPro: Phosphoesterase domain (IPR004843)
Purple acid phosphatase-like, N-terminal (IPR008963)
Purple acid phosphatase, N-terminal (IPR015914)
Iron/zinc purple acid phosphatase-like C-terminal domain (IPR025733)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.33,3.92,3.94,3.09,0.67,8.16,2.55,3.71
Arabidopsis thaliana homolog: AT2G32770.3, AT3G07130.1, AT4G13700.1
Automatic updates:
Name: NM_001248259 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max phytase (LOC547600), mRNA.
PubMed ID: 11500558 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr04:23544405..23544826 (- strand)
Length: 422
Type: three_prime_UTR
Position: Chr04:23544827..23544973 (- strand)
Length: 147
Type: CDS
Position: Chr04:23545549..23545830 (- strand)
Length: 282
Type: CDS
Position: Chr04:23546108..23546298 (- strand)
Length: 191
Type: CDS
Position: Chr04:23547208..23547425 (- strand)
Length: 218
Type: CDS
Position: Chr04:23547540..23547873 (- strand)
Length: 334
Type: CDS
Position: Chr04:23548113..23548304 (- strand)
Length: 192
Type: CDS
Position: Chr04:23548768..23549041 (- strand)
Length: 274
Type: CDS
Position: Chr04:23549042..23549196 (- strand)
Length: 155
Type: five_prime_UTR


>Vigan.04G167100.01
TTTACTTTTA ACTGAAATAT CAGAAGTACT TCACTCCCAG TTCCGAAATA TTCCGCTCCT ACCACGTTCT GACTCTTCCC
CACGCTCAAC ACAACTACAA ATATTATCAC ATTCCTTCTG GCCGATGGAA ACTCGTTCAG CCTTTCGATT CTGCAATGTC
CTCAATTGCT TTTTCCTTTC TTCATTTCAA TCGCTCTTTT CTTCTGCTGC TCAATCTCCT AGCAGCTTTC GCTTACTGCC
GCGTTCCCTC CACTCTCGAA GGTCCCTTTC ATCCTGTCAC CGTTCCCTTC GACCGCTCCT TGCTCGGCGC CGTCGACTTG
CCGCCCTCCG ATCCCCGCGT TCGCCGCCGC GTTCAGGGTT TCCAGCCCGA ACAGATCTCT CTGTCTCTCT CCACCACCCA
TGACTCTGTT TGGATCTCAT GGATTACAGG GGAGTTTCAA ATTGGTTTCA ACATCAAGCC TTTAGACCCA AAGACTGTCG
CAAGTGTCGT CCAATATGGA ACTTCAAGAT TTGATTTAGT GCATGAAGCT AGAGGTGAAT CTCTCATCTA CAACCAGCTC
TATCCTTTCG ATGGCCTTCG GAATTACACT TCTGGAATTA TCCATCACGT TCGACTCATA GGATTGGAAC CAAGCACACT
GTACTATTAT CAATGTGGAG ATCCTTCACT CCAAGCCATG AGTGATATAA ACTATTTCAG GACCATGCCA ATTTCTGGTC
CACATAGCTA CCCTGGCAAA GTAGCTATAG TAGGAGATCT TGGTCTCACT TATAATACAA CTACTACCAT AGGTCACCTG
ACTAATAATG AACCTGATCT TCTTCTATTG ATTGGTGATG TATCCTATGC GAATCTGTAT CTCACAAATG GAACTGGCGC
GGACTGTTAT AAATGCACGT TTCCACAAAG TCCTATACAT GAATCATACC AGCCTCGATG GGACTATTGG GGAAGGTTTA
TGCAAAACCT AATTTCTAAA GTTCCAATAA TGGTGGTAGA AGGAAACCAT GAAACAGAAG AACAGGCCGA TAACAAGACA
TTTGTAGCCT ACAGTTCTAG GTTTGCATTC CCCTCTGAAG AAAGTGGATC TTTATCTACA TTATACTACT CTTTCAATGC
TGGGGGCATT CATTTTATTA TGCTCGGAGC TTATATTAAT TATTATAAAA ACGGTGAACA ATACAAATGG CTGGAGAGGG
ATCTGGCAAG TGTTGATAGA TCAATAACTC CCTGGCTTAT AGCTACTTGG CATCCACCAT GGTATAGTTC TTATGAAGTT
CATTATAAAG AAGCAGAGTG CATGAGGGTG GAGATGGAAA ACCTGTTATA CTCGTATGGT GTGGATATAG TATTTAATGG
ACATGTTCAT GCTTATGAGA GGTCCAATCG GGTTTACAAT TACAGTTTAG ATCCCTGTGG TCCTGTGCAT ATTGCAGTTG
GGGATGGGGG TAACAGAGAG AAGATGGCAA TCAAATTTGC AGACGAGCCT GGTCATTGTC CTGATCCATT AAGTACTCCT
GATCATTTTA TGGGTGGCTT TTGTGCAACA AATTTTACAT TTGACCAAGA GAGTGAGTTC TGTTGGGATC ACCAGCCAGA
TTACAGTGCT TTCAGAGAAA CTAGCTTTGG CTATGGGATT CTAGAGGTCA AAAATGAAAC GTGGGCTTTG TGGACTTGGT
ATCGTAATCA GGACTCGTAC AAGGAAGTTG GGGATCAAAT TTACATAGTG AGACAACCTG ATATATGTGC TGTTCCTCGG
AGTGTGTGCG GAGATTTTAC TACTTCGATT TAAGAGGCAC AAGGAGTTCA TTTGGTGTAA TTAATGAATA TGTCACAACA
GCTGAATATT AACCTCTGTG GAAACCACAA AGTGCGCTAA ATGTCACTAG CATTAACATA TGCTACCTAG CACTCGTATC
CAATATGGTA AACACTCTTT TTTGGTAACG ATCAATGTTC AGAATGTTTA ACAAAAAGTA ACGTAAATCC TCAGTATTTT
GATAAAATGA AAGTGAAAAA TGTTATAAAA AAGAGTGCCT ACAGTGCCGT TGGAAAATAT CTAAGTTGGT TTGGTTGTTC
ACGTTCCTCA AGAAATGTTG GAATGTCGCA ACTCCAAGTG GTCAAAACCA CTTATCCGCA AGTCTCGCCC TGGATCATTC
ATGTTCAAAG AGTGGTTTGC CTCATATGCA AGGCACGAAA TCAGTTTCGA GAAGC

>Vigan.04G167100.01
ATGTCCTCAA TTGCTTTTTC CTTTCTTCAT TTCAATCGCT CTTTTCTTCT GCTGCTCAAT CTCCTAGCAG CTTTCGCTTA
CTGCCGCGTT CCCTCCACTC TCGAAGGTCC CTTTCATCCT GTCACCGTTC CCTTCGACCG CTCCTTGCTC GGCGCCGTCG
ACTTGCCGCC CTCCGATCCC CGCGTTCGCC GCCGCGTTCA GGGTTTCCAG CCCGAACAGA TCTCTCTGTC TCTCTCCACC
ACCCATGACT CTGTTTGGAT CTCATGGATT ACAGGGGAGT TTCAAATTGG TTTCAACATC AAGCCTTTAG ACCCAAAGAC
TGTCGCAAGT GTCGTCCAAT ATGGAACTTC AAGATTTGAT TTAGTGCATG AAGCTAGAGG TGAATCTCTC ATCTACAACC
AGCTCTATCC TTTCGATGGC CTTCGGAATT ACACTTCTGG AATTATCCAT CACGTTCGAC TCATAGGATT GGAACCAAGC
ACACTGTACT ATTATCAATG TGGAGATCCT TCACTCCAAG CCATGAGTGA TATAAACTAT TTCAGGACCA TGCCAATTTC
TGGTCCACAT AGCTACCCTG GCAAAGTAGC TATAGTAGGA GATCTTGGTC TCACTTATAA TACAACTACT ACCATAGGTC
ACCTGACTAA TAATGAACCT GATCTTCTTC TATTGATTGG TGATGTATCC TATGCGAATC TGTATCTCAC AAATGGAACT
GGCGCGGACT GTTATAAATG CACGTTTCCA CAAAGTCCTA TACATGAATC ATACCAGCCT CGATGGGACT ATTGGGGAAG
GTTTATGCAA AACCTAATTT CTAAAGTTCC AATAATGGTG GTAGAAGGAA ACCATGAAAC AGAAGAACAG GCCGATAACA
AGACATTTGT AGCCTACAGT TCTAGGTTTG CATTCCCCTC TGAAGAAAGT GGATCTTTAT CTACATTATA CTACTCTTTC
AATGCTGGGG GCATTCATTT TATTATGCTC GGAGCTTATA TTAATTATTA TAAAAACGGT GAACAATACA AATGGCTGGA
GAGGGATCTG GCAAGTGTTG ATAGATCAAT AACTCCCTGG CTTATAGCTA CTTGGCATCC ACCATGGTAT AGTTCTTATG
AAGTTCATTA TAAAGAAGCA GAGTGCATGA GGGTGGAGAT GGAAAACCTG TTATACTCGT ATGGTGTGGA TATAGTATTT
AATGGACATG TTCATGCTTA TGAGAGGTCC AATCGGGTTT ACAATTACAG TTTAGATCCC TGTGGTCCTG TGCATATTGC
AGTTGGGGAT GGGGGTAACA GAGAGAAGAT GGCAATCAAA TTTGCAGACG AGCCTGGTCA TTGTCCTGAT CCATTAAGTA
CTCCTGATCA TTTTATGGGT GGCTTTTGTG CAACAAATTT TACATTTGAC CAAGAGAGTG AGTTCTGTTG GGATCACCAG
CCAGATTACA GTGCTTTCAG AGAAACTAGC TTTGGCTATG GGATTCTAGA GGTCAAAAAT GAAACGTGGG CTTTGTGGAC
TTGGTATCGT AATCAGGACT CGTACAAGGA AGTTGGGGAT CAAATTTACA TAGTGAGACA ACCTGATATA TGTGCTGTTC
CTCGGAGTGT GTGCGGAGAT TTTACTACTT CGATTTAA

>Vigan.04G167100.01
MSSIAFSFLH FNRSFLLLLN LLAAFAYCRV PSTLEGPFHP VTVPFDRSLL GAVDLPPSDP RVRRRVQGFQ PEQISLSLST
THDSVWISWI TGEFQIGFNI KPLDPKTVAS VVQYGTSRFD LVHEARGESL IYNQLYPFDG LRNYTSGIIH HVRLIGLEPS
TLYYYQCGDP SLQAMSDINY FRTMPISGPH SYPGKVAIVG DLGLTYNTTT TIGHLTNNEP DLLLLIGDVS YANLYLTNGT
GADCYKCTFP QSPIHESYQP RWDYWGRFMQ NLISKVPIMV VEGNHETEEQ ADNKTFVAYS SRFAFPSEES GSLSTLYYSF
NAGGIHFIML GAYINYYKNG EQYKWLERDL ASVDRSITPW LIATWHPPWY SSYEVHYKEA ECMRVEMENL LYSYGVDIVF
NGHVHAYERS NRVYNYSLDP CGPVHIAVGD GGNREKMAIK FADEPGHCPD PLSTPDHFMG GFCATNFTFD QESEFCWDHQ
PDYSAFRETS FGYGILEVKN ETWALWTWYR NQDSYKEVGD QIYIVRQPDI CAVPRSVCGD FTTSI*