GBrowse Details

Vigan.04G193500.01

Basic Information:
Name: Vigan.04G193500.01
Multiple alignment
Variant Information
Position: Chr04:28232435..28233710 (- strand)
Length: 1276
Functional Information:
Description: Similar to Uncharacterized protein. [Q9FQE7, Glycine max]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Glutathione S-transferase, N-terminal (IPR004045)
Glutathione S-transferase, C-terminal (IPR004046)
Glutathione S-transferase, C-terminal-like (IPR010987)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.78,1.30,31.69,57.13,74.33,91.09,114.08,109.47
Automatic updates:
Name: KM818446 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max tau class glutathione S-transferase (GSTU28) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: KM818467 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max tau class glutathione S-transferase (GSTU59) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001248331 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306196 (LOC100306196), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:28232435..28232713 (- strand)
Length: 279
Type: three_prime_UTR
Position: Chr04:28232714..28233061 (- strand)
Length: 348
Type: CDS
Position: Chr04:28233241..28233561 (- strand)
Length: 321
Type: CDS
Position: Chr04:28233562..28233710 (- strand)
Length: 149
Type: five_prime_UTR


>Vigan.04G193500.01
GTAAAGTTCT ATTTTTACAC AGTAGCAAGA TAAGATAAGA ATTTAAATTT TTTTCACGAA GTGAGTGTAC TATATATAGT
AGTTAATTGC TGAAGGGGAA GCTTACAAGA TTGGTTTGGT GAAGATAAGT GAAGTGAAGT GGTGTTGTAA TGGCTGCAGG
TGATGAAGAG CTGACCCTTC TGGGAGTTGT GGGAAGCCCA TTTCTGCACA GGGTTCAGAT CGCTCTCAAA TTGAAGGGAA
TAGAATACAA ATACGTGGAA GATGATTTGA ACAACAAGAG TGATCTTCTC CTCAAGCATA ACCCAGTTTA CAAAATGATT
CCTGTGCTCA TTCACAACGA GAAGCCAATA TCAGAGTCCC TTGTGATTGT TGAATACATC GATGACACAT GGAAACACAA
CCCCATCTTG CCTTCGGATC CTTACCAGAG AGCCTTGGCT CGTTTCTGGG CTAAGTTCAT CGATGACAAG TGTGTGGCTC
CAGCATGGAA ATCTGCCTTC ATAGTTGATG AGAAAGAGAA AGAGAAGGCT GTAGAAGAGT TATTCGAGGC TCTTGGGTTT
CTTGAGAATG AGCTGAAGGG GAAATTTTTT GGTGGGGATG AGATTGGGTT TGTGGATATT GCTGGAGTGT TCATACCTAT
TGTTCAAGAG ATAGCAGGGT TGCAATTGTT CTCGAGTGAG AAATTTCCAA GGCTGTATAA ATGGAGCCAA GACTTTCACA
ACCATCCACT TGTGAACGAG GTTCTGCCTC CTAAAGACCA ACTTTTTGCC TATTTCAAGG CTCGGGCTCA AAGCCTTGCT
GCTAAAAGGA AAAATTAGTA CATTATAGTC AGACTCCATT CCAAAGAATG TTAATTTCAA TTTCAAGATT CTACCGTCTG
AAAGCTACTT CTACGCGTGG TTAGTTAATG TGGTTATATT TCCCTTTTAA TATGAATGTG TGATGACATG GGGTTTCTCC
ATGTGAAAAA AAATCCAATC CTATGATGTT GTTGACATTT TCGATATTTC AATTCAATCA ATAAAATATG TGGGTGAGTA
GTACTAATTA AATGGTACTC CTTCTACACT AAACACATAT TTGATCAACA AAAATCA

>Vigan.04G193500.01
ATGGCTGCAG GTGATGAAGA GCTGACCCTT CTGGGAGTTG TGGGAAGCCC ATTTCTGCAC AGGGTTCAGA TCGCTCTCAA
ATTGAAGGGA ATAGAATACA AATACGTGGA AGATGATTTG AACAACAAGA GTGATCTTCT CCTCAAGCAT AACCCAGTTT
ACAAAATGAT TCCTGTGCTC ATTCACAACG AGAAGCCAAT ATCAGAGTCC CTTGTGATTG TTGAATACAT CGATGACACA
TGGAAACACA ACCCCATCTT GCCTTCGGAT CCTTACCAGA GAGCCTTGGC TCGTTTCTGG GCTAAGTTCA TCGATGACAA
GTGTGTGGCT CCAGCATGGA AATCTGCCTT CATAGTTGAT GAGAAAGAGA AAGAGAAGGC TGTAGAAGAG TTATTCGAGG
CTCTTGGGTT TCTTGAGAAT GAGCTGAAGG GGAAATTTTT TGGTGGGGAT GAGATTGGGT TTGTGGATAT TGCTGGAGTG
TTCATACCTA TTGTTCAAGA GATAGCAGGG TTGCAATTGT TCTCGAGTGA GAAATTTCCA AGGCTGTATA AATGGAGCCA
AGACTTTCAC AACCATCCAC TTGTGAACGA GGTTCTGCCT CCTAAAGACC AACTTTTTGC CTATTTCAAG GCTCGGGCTC
AAAGCCTTGC TGCTAAAAGG AAAAATTAG

>Vigan.04G193500.01
MAAGDEELTL LGVVGSPFLH RVQIALKLKG IEYKYVEDDL NNKSDLLLKH NPVYKMIPVL IHNEKPISES LVIVEYIDDT
WKHNPILPSD PYQRALARFW AKFIDDKCVA PAWKSAFIVD EKEKEKAVEE LFEALGFLEN ELKGKFFGGD EIGFVDIAGV
FIPIVQEIAG LQLFSSEKFP RLYKWSQDFH NHPLVNEVLP PKDQLFAYFK ARAQSLAAKR KN*