GBrowse Details

Vigan.04G206000.01

Basic Information:
Name: Vigan.04G206000.01
Multiple alignment
Variant Information
Position: Chr04:29940295..29947907 (+ strand)
Length: 7613
Functional Information:
Description: Similar to Uncharacterized protein. [I1J6H9, Glycine max]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
UbiB domain (IPR004147)
Protein kinase-like domain (IPR011009)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:36.05,28.64,11.47,87.57,0.87,1.59,4.05,10.12
Arabidopsis thaliana homolog: AT1G79600.1
Automatic updates:
Name: KM399680 NCBI(nuccore)
Organism: Medicago truncatula
Description: Medicago truncatula ABC1-like kinase mRNA, partial cds.
PubMed ID: 25249442 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr04:29940295..29940558 (+ strand)
Length: 264
Type: five_prime_UTR
Position: Chr04:29940559..29940861 (+ strand)
Length: 303
Type: CDS
Position: Chr04:29940957..29941184 (+ strand)
Length: 228
Type: CDS
Position: Chr04:29942033..29942368 (+ strand)
Length: 336
Type: CDS
Position: Chr04:29942635..29943190 (+ strand)
Length: 556
Type: CDS
Position: Chr04:29943488..29943674 (+ strand)
Length: 187
Type: CDS
Position: Chr04:29943781..29944147 (+ strand)
Length: 367
Type: CDS
Position: Chr04:29946715..29946831 (+ strand)
Length: 117
Type: CDS
Position: Chr04:29946832..29947907 (+ strand)
Length: 1076
Type: three_prime_UTR


>Vigan.04G206000.01
TTTGGTATCA ATTATTTGTC CTACAATGAT TCTACGTATT ACAAAAGAAA AAGTGATACA TATCTAATAT TTTTATATTG
ATATGGGTAT TAATGGCGTG CACAAAAAAT ATTGTGTCCT GAAAATCAAA TGGCCCAAAT GCAATTTCGT GTATGCCTTT
CCCATTACTC GTTTGACTCA TTTTCGGTTC GTCCAAAACA ACAACCGCCA TTTAAATTTC CACTGTCCAC GGCATAATAA
GAGTTGACAT ACCCGACACG AACAATGGCA ACGGTGGCGC AGCCGTGTCC TTCATGGACG AGCGGTTCTG TTCCGCTCTC
CAAGCGCCTC ACACGACGAC GTTTCAGGGG CAGAATCAAC TCTCTCACGC GCCTCACCCC ACAAGCTGCT CTGGTCCAAG
CACCTCCTCC ACCTTCCGCG CCCAGAGACA ATAGCTCCAT TCAGGTCCTC ACCCTGTCAC GTGCCAATGA CTTGCAAGCC
GAGGCCAGAG CCATGACACG CGCGGCCAAT GCGTCTGTCT ACAACCCGCA ACTAATAGCG TCCATGTATG GCTCCCAGCC
CGCTAAGGTG GTGCGGAGGA CCCTTCAGAT TGTAGTTGCG TTGGGTTCGT TTGGGCTGAA GCTGTTGCTG GACCAGAGGA
ATGGAGCGCT TGATAAGAAT AGAAGAGTTC GTGCGTCTGA GCTTAAGAAC ATATTTACGA AGCTGGGCCC CACTTTTGTG
AAATTGGGTC AGGGATTGTC CACAAGGCCT GACATATGCC CACCGGAGTA TTTGGAAGAG CTTTCTGAGC TTCAAGATGG
TTTACCTACA TTTCCTGATG AGGAGGCCTT TGCATGCATT GAGAGGGAAT TGGGTCTATC TCTTGACTCC ATATTCTCTT
CTATATCACC ATCACCCATA GCAGCAGCCA GTTTGGGACA AGTTTATAAA GCTCAGTTGA AGTATTCAGG AAGACTTGTC
GCTGTGAAGG TGCAACGCCC TGGTATTGAG GAAGCAATAG GATTGGACTT CTACCTGATA AGAGGTCTTG GGTTTTTCAT
TAATAAATAT GTTGACATAA TCACTAGTGA TGTTGTTGCG CTTATTGATG AATTTGCACG TAGAGTATTT CAGGAGCTCA
ACTATGTGCA GGAGGGACAA AATGCAAGGA GGTTCAAAAA ATTGTATGCT GACAAGGAAG ATATCTGTGT CCCTGATGTT
TTCTGGGATT ATACTAGTGC CAAAGTACTG ACGATGGAGT GGGTTGATGG AGTCAAACTA AACGAGCAGG AAGCTATTGA
GAGACAAGGA TTAAAAGTGT TGGATCTGGT TAATACAGGC ATTCAGTGCA GTCTCAGACA GCTACTTGAG TATGGATATT
TCCATGCAGA TCCACATCCT GGGAACCTTT TAGCAACACC GGAGGGAAAG CTTGCTTTTC TTGATTTTGG GATGATGAGT
GAAACTCCGG AAGAAGCAAG ATCTGCCATA ATTGGCCATG TTGTTCACTT GGTTAACCGA GACTATGAAG CTATGGCTCG
TGACTACTAT GCTCTTGATT TCCTGTCACC TGATGTTGAT GTATCACCAA TTGTACCAGC ACTACGAGAC TTTTTTGATG
ATGCACTTAA TTATACTGTG AGTGAACTTA ACTTCAAGAC ACTGGTGGAT GGTCTGGGAA ACGTTTTGTA TCAATTTCCA
TTTAATGTCC CAGCCTACTA TGCTTTAATA TTGAGGTCCC TCACTGTCTT AGAAGGTTTA GCACTTTATG CTGATCCCAA
TTTTAAGGTT CTTGCGGCAT CATACCCATA TTTTGCTAAG CGGCTGTTGA CAGACCCAAA CCCCTATCTA AGAGATGCTC
TTATAGAGTT GCTTTTCCAG GATGGCAGAT TCAGGTGGGG TAGACTTGAA AACCTGCTAG TCCAGGGGAG AATGGACAGG
GATTTTTCTG CAAAAGAGGC TTTACAACCT GTCCTGAAGG TATTGTTGAG TCCAGATGGT GAAGAACTCA GGACCCTTGT
TATTAAAGAA GCTGTTCAAG TGACTGAAGC TTTTACACTT AGCACAATTT CTGATACATA CAAGTCAGTT CCTGATTTTA
TGAAGACTCT TGTTTTCAAT GGCAATGCAA ATGGACCCAT TATAATGTCC GAAGTTGAAA CACAAAACAT GATAGAGCTT
AGAGATCAAG TATTCAGGAT ATGGGGACTT TTGCAATCAT CTAATGATTT TGATCCAGAT CTTTTACTAC CTATACTACA
GGTTCTTCAG CAACCTGAGG CACGCAGACT TGGGGAACGT GTTATGGGGG GGATCACTCA ACGTCTTGCA GCACGCTTTC
TGCAACAAAT ACTTCGAGTT CCAACACCTT CCACATAGAT TTGTGTCACT GTCAAGTCAG CCTATATAGT CTAGACAAGG
TGCATATTCT ATATATATTT TCTTTGTGCT TGTTAGAAGG TAATTTAAAT TTCATCATCC AATAAAAGAG TGAGTGTTGA
TTTATGGTAT AAGTTTTACA CATTAGTTTA AACATAAAAT TAATTTTATT TTATAAAGTC TGTTTAGAAG TTTATCCGTA
AGTACCATGT TCACTTCTTT CTTACAACAC CTGAAGCATG ACAAATTTGT TTTACTGTAG TTTCTGCAAG GAAAAATACT
CTGGTAGGAA TCTGTTTGCA AGAGTGATAA TAGGTATATG GGATTCTAGG TGTGATAAAA AAAGTTGAAA TCCATTTCAA
CATAATATGA TATAATCGAA TTCTTATACT CAACATTACG AACAAGTTTT AAACAAGAAG TCGTATTTTA GTCATTGTAA
ACTATTAGAT ATTTACAATG TCATGTGTTT TCTCTAGTTA TGAACTGAAG CATTAGATAG GATTATGTTA CTCGGGGTTT
GTTTAGATCT ATTTAGTGTT TTCATCGGTA TAATTTGCAA TGCTAGTTTA GTTCAGTCAT ATTGAATTGA ATCACTTGCC
GTACTATGGT AGCTTATAGT ATTTTGTTTC TTTTATCGTG TCTTAACAGG GAATAGAGGA ATTACATTCT TACAGAGCAA
GAAAAGAAAT TGATTCTTTC AAAATTGTTG GATTAGCTTG TTTGTTTTGA ATCCTCTCAA TTGCAAGAAA AAAATAAACC
TGTACATATT ATATACTCAG TATTATTGAT GCTGCAAGCA TCATAATCAA TCATAATAAT CATCATCATC GGTAAAAATA
ATGTAATAGT GTCAATTGAG AAGGCATTGC TCTTGTGCCT CTTGTTTCTT TTCAAGCACT TTGATATTTG AGTCATAAAT
GCATATATTT ATCTCTATTA ACAATGGCAA GTAACAATAA TAGTTTTATT AGTTTTATAA GAAATAAATA TTTTTTTTGT
CTCTAAACTA ATATAATAAT TTTGTTTTGT TCTTAAATTG AATTATTGAA TATTTTGTTC TTAAACGTTC ATAA

>Vigan.04G206000.01
ATGGCAACGG TGGCGCAGCC GTGTCCTTCA TGGACGAGCG GTTCTGTTCC GCTCTCCAAG CGCCTCACAC GACGACGTTT
CAGGGGCAGA ATCAACTCTC TCACGCGCCT CACCCCACAA GCTGCTCTGG TCCAAGCACC TCCTCCACCT TCCGCGCCCA
GAGACAATAG CTCCATTCAG GTCCTCACCC TGTCACGTGC CAATGACTTG CAAGCCGAGG CCAGAGCCAT GACACGCGCG
GCCAATGCGT CTGTCTACAA CCCGCAACTA ATAGCGTCCA TGTATGGCTC CCAGCCCGCT AAGGTGGTGC GGAGGACCCT
TCAGATTGTA GTTGCGTTGG GTTCGTTTGG GCTGAAGCTG TTGCTGGACC AGAGGAATGG AGCGCTTGAT AAGAATAGAA
GAGTTCGTGC GTCTGAGCTT AAGAACATAT TTACGAAGCT GGGCCCCACT TTTGTGAAAT TGGGTCAGGG ATTGTCCACA
AGGCCTGACA TATGCCCACC GGAGTATTTG GAAGAGCTTT CTGAGCTTCA AGATGGTTTA CCTACATTTC CTGATGAGGA
GGCCTTTGCA TGCATTGAGA GGGAATTGGG TCTATCTCTT GACTCCATAT TCTCTTCTAT ATCACCATCA CCCATAGCAG
CAGCCAGTTT GGGACAAGTT TATAAAGCTC AGTTGAAGTA TTCAGGAAGA CTTGTCGCTG TGAAGGTGCA ACGCCCTGGT
ATTGAGGAAG CAATAGGATT GGACTTCTAC CTGATAAGAG GTCTTGGGTT TTTCATTAAT AAATATGTTG ACATAATCAC
TAGTGATGTT GTTGCGCTTA TTGATGAATT TGCACGTAGA GTATTTCAGG AGCTCAACTA TGTGCAGGAG GGACAAAATG
CAAGGAGGTT CAAAAAATTG TATGCTGACA AGGAAGATAT CTGTGTCCCT GATGTTTTCT GGGATTATAC TAGTGCCAAA
GTACTGACGA TGGAGTGGGT TGATGGAGTC AAACTAAACG AGCAGGAAGC TATTGAGAGA CAAGGATTAA AAGTGTTGGA
TCTGGTTAAT ACAGGCATTC AGTGCAGTCT CAGACAGCTA CTTGAGTATG GATATTTCCA TGCAGATCCA CATCCTGGGA
ACCTTTTAGC AACACCGGAG GGAAAGCTTG CTTTTCTTGA TTTTGGGATG ATGAGTGAAA CTCCGGAAGA AGCAAGATCT
GCCATAATTG GCCATGTTGT TCACTTGGTT AACCGAGACT ATGAAGCTAT GGCTCGTGAC TACTATGCTC TTGATTTCCT
GTCACCTGAT GTTGATGTAT CACCAATTGT ACCAGCACTA CGAGACTTTT TTGATGATGC ACTTAATTAT ACTGTGAGTG
AACTTAACTT CAAGACACTG GTGGATGGTC TGGGAAACGT TTTGTATCAA TTTCCATTTA ATGTCCCAGC CTACTATGCT
TTAATATTGA GGTCCCTCAC TGTCTTAGAA GGTTTAGCAC TTTATGCTGA TCCCAATTTT AAGGTTCTTG CGGCATCATA
CCCATATTTT GCTAAGCGGC TGTTGACAGA CCCAAACCCC TATCTAAGAG ATGCTCTTAT AGAGTTGCTT TTCCAGGATG
GCAGATTCAG GTGGGGTAGA CTTGAAAACC TGCTAGTCCA GGGGAGAATG GACAGGGATT TTTCTGCAAA AGAGGCTTTA
CAACCTGTCC TGAAGGTATT GTTGAGTCCA GATGGTGAAG AACTCAGGAC CCTTGTTATT AAAGAAGCTG TTCAAGTGAC
TGAAGCTTTT ACACTTAGCA CAATTTCTGA TACATACAAG TCAGTTCCTG ATTTTATGAA GACTCTTGTT TTCAATGGCA
ATGCAAATGG ACCCATTATA ATGTCCGAAG TTGAAACACA AAACATGATA GAGCTTAGAG ATCAAGTATT CAGGATATGG
GGACTTTTGC AATCATCTAA TGATTTTGAT CCAGATCTTT TACTACCTAT ACTACAGGTT CTTCAGCAAC CTGAGGCACG
CAGACTTGGG GAACGTGTTA TGGGGGGGAT CACTCAACGT CTTGCAGCAC GCTTTCTGCA ACAAATACTT CGAGTTCCAA
CACCTTCCAC ATAG

>Vigan.04G206000.01
MATVAQPCPS WTSGSVPLSK RLTRRRFRGR INSLTRLTPQ AALVQAPPPP SAPRDNSSIQ VLTLSRANDL QAEARAMTRA
ANASVYNPQL IASMYGSQPA KVVRRTLQIV VALGSFGLKL LLDQRNGALD KNRRVRASEL KNIFTKLGPT FVKLGQGLST
RPDICPPEYL EELSELQDGL PTFPDEEAFA CIERELGLSL DSIFSSISPS PIAAASLGQV YKAQLKYSGR LVAVKVQRPG
IEEAIGLDFY LIRGLGFFIN KYVDIITSDV VALIDEFARR VFQELNYVQE GQNARRFKKL YADKEDICVP DVFWDYTSAK
VLTMEWVDGV KLNEQEAIER QGLKVLDLVN TGIQCSLRQL LEYGYFHADP HPGNLLATPE GKLAFLDFGM MSETPEEARS
AIIGHVVHLV NRDYEAMARD YYALDFLSPD VDVSPIVPAL RDFFDDALNY TVSELNFKTL VDGLGNVLYQ FPFNVPAYYA
LILRSLTVLE GLALYADPNF KVLAASYPYF AKRLLTDPNP YLRDALIELL FQDGRFRWGR LENLLVQGRM DRDFSAKEAL
QPVLKVLLSP DGEELRTLVI KEAVQVTEAF TLSTISDTYK SVPDFMKTLV FNGNANGPII MSEVETQNMI ELRDQVFRIW
GLLQSSNDFD PDLLLPILQV LQQPEARRLG ERVMGGITQR LAARFLQQIL RVPTPST*